Sbis056963.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- -
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000294.1:928241-930049[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 5.5e-10 41.7 0.0 2 40 11 49 10 52 0.95
Sequence Information
- Coding Sequence
- ATGTCTAAAAGGAAGTATGGTGCTTGGCAGGAGGAGGATATGGAGAGAGCTATAGCAGCTTACAGGAATGGGGATATGGGGTTTAATGAGTGCTGCCGACAGTATGGTGTTCCCAAACCGACTCTTAAGCGTCACCTTGATGGAAAAAACCTAAAAGCTATTGATGGAAAAAAATCAATGGGGCGTCTGACTACGTTGTCCCCCGAGATAGAAGAGGAGTTGGTGAAACGGATTAAATTATTTGAGGATTGCCTTTTTGGCATGACAATTTTGGACGTGCGGAAACTTGCATATCAAATAGCTGAAAGTATGGGCATCCCTCACTACTTTAATGTTGAGAATAAGCTGGCAGGGAAAAAATGGTACTACGGGTTCATGGCCCGCCACAACAATATCTCCTTACGGCAACCCCAAGGAACGTCTTTGGCGAGAGCCAAAGGCTTTAATAAGGAAAACGTCGAAGggttttttgaaatattgaagaaAACTGTTGATGAAAACCATGTTGACGCTACAAATATTTACAACGTCGACGAAACTGGAGTGAGTACAGTGCAAAACAAGTGCCAAAAGGTTTTGGCCGAAAAAGGAAAACGAGCGGTAGGGTCGATAACTAGCGGTGAAAGGGGGGTAAACACAACAGTGGTTTGCTGCTCCAGTGCTTCCGGGCTATACGTACCCCCGATGATAATTTACAAAAGAATGCGCATGACAAATGAGTTGAAAGTTGGTGCTCCACCAGGAAGTGTGGTAGAAGTGTCTGAAACAGGTTACATCAACACGGAACTTTTCGTGAAGTGGCTTCGTCACTTTATCGAAGTAGTCAAGCCGACCAAAGAGAGAAAAGTGCTCCTTCTTCTCGATGGACACTCCACGCACTCGAAAAACCTAGAAGCCTTAGATGTCGCTAGAGACGCTGGCGTAGTCTTGCTTCAACTTCCAGGGCACACTACCCACAGACTTCAGCCCTTAGACAGGTCTTTTTTCAAGCCTCTCAAAGGTTATTTCAATCAAGCTGTGGAAAAATGGCTGCGAACTAACCCAAGCTTGAGTGTCACGCAGTACCAGATATCAACGCTTGTAAATGAAGCTTATGGAAAGGCTGCAACGATTGAGAATGCAATACAAGGGTTCAAATGTAGCGGTGTGTGGCCCATTGATCCGTTAGTCTTCAAGGAAACTGACTTTCTACCATCGGAAAACCTTACACAACCAGTGCAACCTGCAAACAACACAGATGAAGAGGAAACAGTTATTGGCCTCGAAATAAATAATTCTGCATGCAATGGCGTTGACAGTATAACGAGTCCTAAAGCGTCTCTCGAGGCTTTGTCTCCCCTACCGCAACCTCAGAAAAAAAAGAGTAGAACTACTAAACAAAACGCACAAAAAGCTGTTGTATTGACCAGTAGTCCTTACAAACAGGACCTAGAATTAGCAAGAGAACTGAGAACAGCCAAGGAAAAAGTCAAGGAACTTCAGATGAAAGTTACTGCACTAAAGTCTTCTGCAAGAAGTCCCCCCCTCGCAAAAGTTGCCAAGGCAAAGACCTCATCAAAGCCAGCTGTAGGGCTATCTTCAAACAATCGTAAGAAGCCTAGTGAAGTATTTCTCAACCAAGCCTCTACTTCGAATCAGCCTGACGTCATGATTGAAATCCATGAAGAAGATTGGTTTTGCGCTGTTTGCGAAGAAAACTTTGTAGAAAACATGGTTCAGTGTGTTTTGTGCAAGAACTGGGTGCATGAAGGTTGTGCTGGTTCAAAAGCcagaataaaaaagtttgtttgcGCAAATTGTGAGACATAA
- Protein Sequence
- MSKRKYGAWQEEDMERAIAAYRNGDMGFNECCRQYGVPKPTLKRHLDGKNLKAIDGKKSMGRLTTLSPEIEEELVKRIKLFEDCLFGMTILDVRKLAYQIAESMGIPHYFNVENKLAGKKWYYGFMARHNNISLRQPQGTSLARAKGFNKENVEGFFEILKKTVDENHVDATNIYNVDETGVSTVQNKCQKVLAEKGKRAVGSITSGERGVNTTVVCCSSASGLYVPPMIIYKRMRMTNELKVGAPPGSVVEVSETGYINTELFVKWLRHFIEVVKPTKERKVLLLLDGHSTHSKNLEALDVARDAGVVLLQLPGHTTHRLQPLDRSFFKPLKGYFNQAVEKWLRTNPSLSVTQYQISTLVNEAYGKAATIENAIQGFKCSGVWPIDPLVFKETDFLPSENLTQPVQPANNTDEEETVIGLEINNSACNGVDSITSPKASLEALSPLPQPQKKKSRTTKQNAQKAVVLTSSPYKQDLELARELRTAKEKVKELQMKVTALKSSARSPPLAKVAKAKTSSKPAVGLSSNNRKKPSEVFLNQASTSNQPDVMIEIHEEDWFCAVCEENFVENMVQCVLCKNWVHEGCAGSKARIKKFVCANCET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01372258; iTF_01372250; iTF_01372254; iTF_01372255; iTF_01372256; iTF_01372259; iTF_01372260; iTF_00876972; iTF_00876979; iTF_01372252; iTF_01372253;
- 90% Identity
- iTF_01372258; iTF_01372255; iTF_01372256; iTF_01372259; iTF_01372260; iTF_01372252; iTF_01372254; iTF_01372253;
- 80% Identity
- -