Sbis032436.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- Arid5a
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000098.1:875574-892372[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-28 5.4e-24 87.4 0.0 2 89 78 163 77 163 0.95
Sequence Information
- Coding Sequence
- ATGTTTTATACTGTTGCAGCACCCAAATTGAAAGGCCGCCCTAGAAAAAAGAGAAAGGTGTTATTAGACATGTCACCTGAATCATCAGACTCAGAATCAGAATCATCGTCTGTTTCAACTTCGTCCTCATCTACCAAGGTGAAGAACCTGTCCCCCCAGAGGACTGTGGCTCAAGTAACCTGGTTGGCAAGTACTCGCCGCACAGTTAAACCTTCTATTACATCCACTGAGGAAAGGGACTTTACCACTCGCCTCAACAACTTCATGCGCACTCGTCAGACTCCTATCAATCGAGTCCCCACCATCGGCTTCAAGGAGTTGGATCTGTTCAAGTTATACAATAAAGTTCGCCACCTTGGAGGTTATGATGCTGTTACAGCTAGTCGTCTGTGGAAGTATGTCTACGAGGAGATGGGAGGTGACCAGTCCAGCACTAGTGCCGCTACCTGCTGTCGTAGGCATTACGAGAGATTGTTGCTACCATTTGAGAGACACTTGGCACCCAACCGCAGCAGAAATGCTTCTCTTGCCAAACTGAAGAAGTATCAGGAGATCAGTATTACAACAAAGTCAACTCCTGCCAATGATGAGCACATCATCTACAAATGCCCTTATATGGCTTTCATTAATTCTGTTTAA
- Protein Sequence
- MFYTVAAPKLKGRPRKKRKVLLDMSPESSDSESESSSVSTSSSSTKVKNLSPQRTVAQVTWLASTRRTVKPSITSTEERDFTTRLNNFMRTRQTPINRVPTIGFKELDLFKLYNKVRHLGGYDAVTASRLWKYVYEEMGGDQSSTSAATCCRRHYERLLLPFERHLAPNRSRNASLAKLKKYQEISITTKSTPANDEHIIYKCPYMAFINSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -