Sbim036083.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971135.1
- Location
- OZ020185.1:15366995-15373689[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3 4.7e+04 -5.0 1.9 15 19 164 168 164 168 0.85 2 21 0.23 3.5e+03 -0.5 0.8 4 10 199 205 198 205 0.95 3 21 2.1e-07 0.0033 18.7 17.3 1 19 213 230 213 230 0.99 4 21 0.00099 15 7.0 17.6 3 19 268 284 256 284 0.85 5 21 0.89 1.4e+04 -2.4 2.0 6 10 309 313 308 313 0.90 6 21 1.5e-07 0.0023 19.2 15.7 1 18 319 336 319 337 0.97 7 21 5.1e-06 0.079 14.3 12.9 1 18 372 389 372 390 0.98 8 21 0.55 8.5e+03 -1.7 0.6 1 5 399 403 399 408 0.89 9 21 8.4e-05 1.3 10.4 17.1 1 18 424 441 424 442 0.94 10 21 1.3e-07 0.002 19.4 12.5 1 18 451 468 445 469 0.86 11 21 0.9 1.4e+04 -2.4 1.0 5 10 497 502 497 502 0.94 12 21 0.00077 12 7.4 7.4 10 19 518 527 515 527 0.90 13 21 0.00095 15 7.1 5.2 1 12 537 547 537 547 0.90 14 21 3 4.7e+04 -6.9 4.5 14 18 575 579 575 579 0.86 15 21 3 4.7e+04 -4.4 1.4 6 10 606 610 605 610 0.58 16 21 1.5e-05 0.23 12.8 4.2 1 11 616 626 616 627 0.96 17 21 2.7 4.2e+04 -4.0 2.4 5 10 643 648 640 648 0.60 18 21 9.2e-05 1.4 10.3 20.7 3 19 657 673 656 673 0.92 19 21 3 4.7e+04 -6.8 3.1 10 13 680 683 679 683 0.68 20 21 3 4.7e+04 -4.8 1.9 5 10 705 710 705 710 0.86 21 21 1.5e-05 0.23 12.9 12.3 1 17 716 734 716 736 0.86
Sequence Information
- Coding Sequence
- ATGAGTTCCTATAAATATAATCCGAAACCAAAAAATCCCTGGAAAGTGAACCAAAATCAAGCAGCTCCTCCCAAAAAGTCTAACAGTGCAACTAAAAAAACAGCCgaacaaaaatttcaagaagCCCAGTCGAAACTCCAACAAGCAGTTCAGAAACATGTCAAAGATTATGTATCTtcggaagaagaagaagaaattgaaTCGGATAACGTAATtggATCAATTTTACAAAACTACAATGCAACAGGAGCTCAATTTAATCTTGAGAGAACGAAGAATTTTTTACAGGATGCATTTAATTCTGGAGCAAGCACTTGTCTCATTTGTATTTCTTCAATCAAGCGCTCAGAAGAGatATGGAGTTGTTTAGAGTGTTACTGTATATTCCATCTAATGTGCATACAAAGATGGTCGAAAGATACTTTGGTACAACAAAAGTTAGCATTAGAAGATCAAATTCAAGTACGCCAAATTAAAATGACTTGGGGTTGTCCTAAATGCAGACATGACTATGGGCCTCAAGATATTCCTTCGGAATATCATTGTTTTTGTAAGAAAGCAATTAATCCTAAATATATGCCACTTATAGTCCCCCATTCATGTGGGGAAACATGTGGAAAAGATCTAAAACCGTATTGCGGGCACCAGTGCCTTTTATTATGCCATCCAGGGCCTTGCCCACCTTGCCCAAAAACAGTAAAAGTTTCCTGCTATTGTGGATCATCTCCTTTAAAAGTACAACGTTGCAGTAGTAAAGATTGGTCTTGTGGTAAACCTTGTGGACGGCAATTAAGCTGTTTTAAGCATAAATGTTCGCAATCATGTCATCCTAGTGAATGCCAAACTTGCCCCAAAAAAAGTTTGCAGAAATGTTTATGTGGGGATGATATGCAGTTAAGAGATTGTTCTTTACCACTTTGGCAATGTCAAAAGGTGTGCGATAAGGCTTTATCATGTGGACATCATAATTGTACTGAAATTTGTCATAAAGGTAATTGTGGTGATTGCGATTTATCCAAAACTCGAACTTGTCCATGTGGAAAATCGTTCCATCAATTACCCTGCACTGAGGATACACCTACTTGTGGTGATACTTGcgaaaaaattttagaatgcgGGCAGCACATTTGTCATGAGAGATGCCATAAAGGCAAATGCATGATTTGTGTTGAAACTGCCGTTAAATCATGTAGATGTGGTCTTCATACCAAAGAAGTTCAATGCAAGAAACCTTACTTATGTGAAACTAAATGCAAACAGATGAAAGATTGTAACAAGCATCCTTGTAATCGTAAGTGTTGCGATGGAAACTGTCCACCTTGTGAAAAAATTTGTGGTCGTACTTTAAGTTGCCGAAAACATACTTGCACTTCTATTTGTCATAGGGGACCATGTTACCCTTGTGCCTTAACCGAATCAGTTTATTGTAATTGCGGAGCGACATTTGTAACAGTTCCATGTGGTAAAAAGAGCCGTACAAGACCACCAAAATGCAATAAACTTTGcagTAATCCTCCTGATTGTCACCACGAATCAAGGGAACCTCATAGGTGCCATTTTGGAGATTGCCCACCTTGTCGCCAAATTTGCCTTAAGGCACGAGGAAAATGTTCACACACTTGCCCTGCACTTTGCCATTCTTCAATATTGGTACAGATAGAGGGACAAAAAGCTTCAACTCCATGGGAGGTTCAAGGTCCTCAACtaattaaaaaagctttacCATGTCCAGACTGTGTGGTTCCTGTACCAATTACTTGCTTAGggAATCATGAAACATCTGATTGGCCTTGTCATCTAGCAAAAATTTCCAGTTGCCACAGACCTTGTGGAAGAATGTTACTTTGTGGCAATCATTTTTGCTCACAACCATGTCATGTAATTGAAGAAGCTGTTGATTCTTTACAatGTGGAATAAATTGTGATACTTGTGAGAATTCTTGCTCAAAAGAGAGACCTTCTGGTTGTACCCATCACTGCCCCAAACCCTGCCATAAAGGAAGTTGTCCTCCTTGTAAGCAAATGCTCAGGGTTAAATGCCACTGCGGACTGAGCCAACCTTATATTGAATGCAGCTTGTGGACTTCAAGTGATGACAAAGAAAATcttcaaacttgtcaaaatcaATGTCCTAACTTCTTTTCTTGTGGTCATCGTTGTCGGTCAAATTGTCATTCTGGAGAATGTCCAAACTCAGAGCAATGCAAGAAAAAGGTTAAAGTTAGCTGCAACTGTAAACggttaaaaaaagaattttcatGTGAAACTGTTAGAAGAAAAGAAGCTGCAGTTGAATGCAATGAAGAATGTTTTAAGTtacaagaagaagaaaaaaatttaaaggagATTGAAAATGAGAAGCAAAGAAAGGAAATGCTTCTAAAAAATCAGCGAGAATTAGAACAATACGAGAAGAAATTTCAGTCCAAAAAACGTAATCGAGATAAAAAGCAATATGAAATCCAAGAAGATAAAACTTTTTGGGATCTTTATTTGACTTATATACtaggatttatatttttttgtatatctttgtATGTTGTTTTTCATGCCAGTGGTGTAGCTACCTCAAGGCCAGTGTAA
- Protein Sequence
- MSSYKYNPKPKNPWKVNQNQAAPPKKSNSATKKTAEQKFQEAQSKLQQAVQKHVKDYVSSEEEEEIESDNVIGSILQNYNATGAQFNLERTKNFLQDAFNSGASTCLICISSIKRSEEIWSCLECYCIFHLMCIQRWSKDTLVQQKLALEDQIQVRQIKMTWGCPKCRHDYGPQDIPSEYHCFCKKAINPKYMPLIVPHSCGETCGKDLKPYCGHQCLLLCHPGPCPPCPKTVKVSCYCGSSPLKVQRCSSKDWSCGKPCGRQLSCFKHKCSQSCHPSECQTCPKKSLQKCLCGDDMQLRDCSLPLWQCQKVCDKALSCGHHNCTEICHKGNCGDCDLSKTRTCPCGKSFHQLPCTEDTPTCGDTCEKILECGQHICHERCHKGKCMICVETAVKSCRCGLHTKEVQCKKPYLCETKCKQMKDCNKHPCNRKCCDGNCPPCEKICGRTLSCRKHTCTSICHRGPCYPCALTESVYCNCGATFVTVPCGKKSRTRPPKCNKLCSNPPDCHHESREPHRCHFGDCPPCRQICLKARGKCSHTCPALCHSSILVQIEGQKASTPWEVQGPQLIKKALPCPDCVVPVPITCLGNHETSDWPCHLAKISSCHRPCGRMLLCGNHFCSQPCHVIEEAVDSLQCGINCDTCENSCSKERPSGCTHHCPKPCHKGSCPPCKQMLRVKCHCGLSQPYIECSLWTSSDDKENLQTCQNQCPNFFSCGHRCRSNCHSGECPNSEQCKKKVKVSCNCKRLKKEFSCETVRRKEAAVECNEECFKLQEEEKNLKEIENEKQRKEMLLKNQRELEQYEKKFQSKKRNRDKKQYEIQEDKTFWDLYLTYILGFIFFCISLYVVFHASGVATSRPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -