Sbim005313.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- gata4_1
- Assembly
- GCA_963971135.1
- Location
- OZ020180.1:42933787-42989834[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.24 2.2e+03 -0.4 0.3 9 24 193 211 189 212 0.74 2 3 3.9e-18 3.6e-14 53.4 2.7 1 34 310 342 310 344 0.97 3 3 8.9e-19 8.3e-15 55.4 3.2 1 34 364 396 364 398 0.98
Sequence Information
- Coding Sequence
- ATGTACCATTTACATGTGATTGAAGGGTACGCGGAGGAGGCTCCAACTCAGTACAGTCCAACCTCCCAACATGAGGGGGCGGAACCTTCGCCGCACTCCCCCCGCTCCGGCACGCCTCTGGTGGAGTGTCTCGCTTACTCAGAGCAAGAGATAGAAGCTTACCCCCAAGCCATAAGAGCCGACGGAGAATACCTAGTTTATGCCAGCAGAATCGAAGAAGTACAAATTGAAGAAACATCCAATGGACATCAGCAGCAGTACCTGCAATTGGATGGTACCATGACAAACCACCCTGGTTCTCCTCATGGAAGTAACGACTCTGGCTCAGGAGGTTCGCCGGGCCGAAATCAAACATCTTTCACGCATTTGGGAGAAATCTCACCATCTGAACATCAGCAACTTGAACAACCACAACTCACTCAGCTCTCTAATCACATCAGTTATGGCGGAACCGTCACCATAGACACAACAACTCCTGATAATATAAGccCATTATATTCAGGCACTAGAGCACTTAGTTACACAACTACAGCTATGCCTTATTATTCAACATCCCCAGATCTTACAGCACAACCAACTCAGCTATGGACAAATTCAGgaaTGGGTAATCAAGGTAGTTTAAACTTGTGTAATGGTGAAGAATATGAGAAACCAGGTGGTACCAACACTTCGCTTCCAGCTTTCAATCGATTGTCAGCAACATCGTTCCATGCAAATTCGGGAAGACCTTCTCATAGAGCAGCACCTTACACGCTCCCCAATCCCACAGGATACGCAGATTGGCAATACACCACTGATCCACTTCCACCACAATACAACTTCATGGCTACTCCTTCAAGAAATCGCCAACAAGTGTCGATGTCAGCGGCTGCCTCCTTATCAGCAATCGATCCAAGAACTGCAGAGTACTTCACGGAAGGACGCGAGTGCGTGAATTGCGGCGCTATTGATACGCCACTGTGGCGTCGCGACGGCACTGGTCACTATTTGTGCAACGCCTGTGGACTCTACCACAAGATGAACGGCATGAATCGACCACTCGTCAAGCAGCCTCGTAGATTgTCTGCTTCAAGAAGAGTTGGTTTAACTTGCTCAAACTGCCAAACTAGTACAACTTCCTTGTGGAGACGCAATGCAATGGGTGAACCAGTTTGCAATGCTTGTGGTCTTTACTTCAAACTCCATGGAATTAACCGACCATTAGCTATGAAAAAAGAAAGCATCCAGACTAGGAAGCGTAAACCAAAAGGTGCCAAAGATGTAACTGCTACAAATAATAGATTATCAGGAGCTGTTACCATCAAAATGGGTGATATCAAAATGGAAGCAGACCATGCTGTACCTAAACATGAACATATGCCAGGAATCAAAATTGAGCATAACAATAtagATAATTACAATGAAATGCGTACTTTGACATCGCTCTCTTCTCATCTGATGAATTCAAATCTACCAGGGCAATACATTTACAGCACACCACCAGCACATCAAAGGTCATCCCCTTATCCAACATCACAGTCATCACCTTACACAACATCTCAATCATCACCATACGCAAATCAAGCATCACCTCAAATTGGGTATTACGACATGTTGCATCAAACCACTCCAAGTCCTCCACTAAATTCATCCCCAAGCCCACAATCACCCCAcatagttaataataataataacaataacaacaacatttcaaaattaattatgaatgaTGGACCAATGGAAAGGGCCACAGTTGTCTCATTGtcttctgtttaa
- Protein Sequence
- MYHLHVIEGYAEEAPTQYSPTSQHEGAEPSPHSPRSGTPLVECLAYSEQEIEAYPQAIRADGEYLVYASRIEEVQIEETSNGHQQQYLQLDGTMTNHPGSPHGSNDSGSGGSPGRNQTSFTHLGEISPSEHQQLEQPQLTQLSNHISYGGTVTIDTTTPDNISPLYSGTRALSYTTTAMPYYSTSPDLTAQPTQLWTNSGMGNQGSLNLCNGEEYEKPGGTNTSLPAFNRLSATSFHANSGRPSHRAAPYTLPNPTGYADWQYTTDPLPPQYNFMATPSRNRQQVSMSAAASLSAIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCSNCQTSTTSLWRRNAMGEPVCNACGLYFKLHGINRPLAMKKESIQTRKRKPKGAKDVTATNNRLSGAVTIKMGDIKMEADHAVPKHEHMPGIKIEHNNIDNYNEMRTLTSLSSHLMNSNLPGQYIYSTPPAHQRSSPYPTSQSSPYTTSQSSPYANQASPQIGYYDMLHQTTPSPPLNSSPSPQSPHIVNNNNNNNNNISKLIMNDGPMERATVVSLSSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -