Basic Information

Insect: Stenus bimaculatus
Gene Symbol: RREB1
Assembly: GCA_963971135.1
Location: OZ020182.1:18155825-18161169[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3e-05 0.0044 18.7 0.8 1 23 76 98 76 98 0.99

2 16 0.00034 0.051 15.4 0.4 1 23 111 133 111 133 0.98

3 16 2e-05 0.0031 19.2 6.2 1 23 139 161 139 161 0.99

4 16 1.5 2.2e+02 3.9 0.1 1 8 222 229 222 246 0.66

5 16 0.47 71 5.5 2.5 2 23 252 274 252 274 0.87

6 16 1.5 2.2e+02 3.9 1.4 1 19 322 340 322 342 0.78

7 16 0.012 1.8 10.5 0.2 1 23 465 487 465 487 0.98

8 16 8.3e-06 0.0013 20.4 0.8 1 23 496 518 496 518 0.99

9 16 0.00085 0.13 14.1 3.1 1 23 524 547 524 547 0.97

10 16 0.00073 0.11 14.3 2.8 1 23 907 930 907 930 0.96

11 16 0.00051 0.076 14.8 0.4 2 23 1147 1168 1146 1168 0.97

12 16 0.13 19 7.2 6.3 1 23 1174 1197 1174 1197 0.97

13 16 0.01 1.5 10.7 4.2 1 23 1224 1248 1224 1248 0.95

14 16 5.4 8.1e+02 2.1 3.6 1 23 1299 1322 1299 1322 0.84

15 16 0.012 1.9 10.4 0.4 2 23 1368 1389 1367 1389 0.94

16 16 0.0077 1.2 11.1 5.9 1 23 1395 1417 1395 1417 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3e-05	0.0044	18.7	0.8	1	23	76	98	76	98	0.99
2	16	0.00034	0.051	15.4	0.4	1	23	111	133	111	133	0.98
3	16	2e-05	0.0031	19.2	6.2	1	23	139	161	139	161	0.99
4	16	1.5	2.2e+02	3.9	0.1	1	8	222	229	222	246	0.66
5	16	0.47	71	5.5	2.5	2	23	252	274	252	274	0.87
6	16	1.5	2.2e+02	3.9	1.4	1	19	322	340	322	342	0.78
7	16	0.012	1.8	10.5	0.2	1	23	465	487	465	487	0.98
8	16	8.3e-06	0.0013	20.4	0.8	1	23	496	518	496	518	0.99
9	16	0.00085	0.13	14.1	3.1	1	23	524	547	524	547	0.97
10	16	0.00073	0.11	14.3	2.8	1	23	907	930	907	930	0.96
11	16	0.00051	0.076	14.8	0.4	2	23	1147	1168	1146	1168	0.97
12	16	0.13	19	7.2	6.3	1	23	1174	1197	1174	1197	0.97
13	16	0.01	1.5	10.7	4.2	1	23	1224	1248	1224	1248	0.95
14	16	5.4	8.1e+02	2.1	3.6	1	23	1299	1322	1299	1322	0.84
15	16	0.012	1.9	10.4	0.4	2	23	1368	1389	1367	1389	0.94
16	16	0.0077	1.2	11.1	5.9	1	23	1395	1417	1395	1417	0.98

Sequence Information

Coding Sequence: ATGCAAGGCGTACTGTACATACCACCTGGACCAACTGGATGTACCCCACGTAAggaatctgCGATGGACTTAGCAACGGAACAATTAACCAAAGAAATAAACCAAAGCGACTCAGGAATCTTCTCAGCGACGAACAACACGACCTGCACTACAGAAGAAACTTCAAATCCTACTCATCAATCTGATAGTGACAACCGTTCAGACTGCAGCAGTCCTGATCGAAAGTATGTTTGCCCAATCTGCGACACAATGCTCACCTCTCAACACGAATTTACTCTTCACATTCGTTCCCATAACAACGACAGTGAAGTGCAAGATCCTGAAAAGGGTTACACCTGCAGGATTTGCTTCAAAGTCCTTAGCTCGAGCTCTAGTTTGGATAGACATGTTTTGGTACACAGTGGAGAAAGACCATTTACCTGCAAACACTGTGGCGACACTTTCACCACCAATGGAAACATGCATCGACATATGAGGACGCACAAATCGGAAAATTACGAATCCGATGGAAGTTCTGATAGCAACTCGAGTTCTAAAGCCATTGAATACAACAAtaacaaaattgataaatatgacAATAAAAGAAAAGCGGAAGATGACACCCATATGCCACTACGTAAAAAACCAAATTTATCAGAGGAAATCCACGAAAATGGTGATAACTTCAAATGTCCAATTTGTGATAGGGATGATTTTATAAGCATAAAATCATTAGAGATGCATTTGGAAGATAATCATCCCGATTATCCAGCTAAATGTCATGATTGTAACCGAATTTTCGAAAACAACAAGATTCTCAACTTTCATCGCAATACCGTCCACGCTGATGAAAacggaaaaaacaaaaattcggtCGTTGGATTTAAAGATATTACATTCGTTGATTTTAGTTGCAAAAAATTTCCTCATATTGCACGTTATGAATGTGAAAGGAATTTACATAAAGTAACTGCTGGGCCTAAATACCAATGCACTAAATGCTCAAGAGCATTTCCTTGCGATAAATCCTTGGAAATTCACTCGAAAGATTGTGGTACAATGAATTTGAGTGAATGTTCCGATTTTAAATCGGCATCCTATGATGGTGATATTCGCCGAAACGATTTCTTCTCACGTTTGGATCTTCAAGATAATTCTCCAGAAAAGTTCAGACCATTTCAAGAAGGTAGCAGGAAATTGCAACAAAGGCTTTTGGATGGAATCAAATCGGATGGAAGCAAAGACTTGGCTGATATCCAATCCATCATTTCAATGACTAGTAATGGTAGCTTATTACAACATTTACAAGGTAAAAACGATATTTCACAAAACCTCGATAATGATAAAAATGAAGAAGAGGAAACTCAGGATATGTTCGCTCAGGAATTTAGAAGGATGAAACTTAGAGGTGAATTTCCTTGTAGATTATGCACGGCTGTTTTTCCTAATCTTCGCGCACTTAAAGGGCATAATCGCACACATTTGAATAGTACTAATAATGGTACTTATAGGTGTAATATGTGTCCCCATTCATCAATAGATAAAGCTGCATTAATACGACACATGCGCACTCATAATGGCGATAGACCTTACGAATGTTCGTTATGTAATTACGCTTTTACCACAAAAGCCAATTGCGAACGCCATTTGAGAAATAGACATGCAAAAACCACACGCGaagaagttaaaaaatcaattatttaccACCCATCTGAAGATCCAACCAATGAAGAAATTACCAAACAGTtggaacataaaaaattaaatacaagcACGAACTCGATTGATTCGAGCGATTTAAGCAACGACAAAATACGATGTTCGACTCCTAAAAACATTCCTGCCTTTcctgatttacaaaaaattaatccagAAATTATATCAAAACACAAAATTACACCTCAAGCCTACACCAGTATAACCGAAATAatacaaaatgaaaatattaagtCCCTTAAAGATCACAGGATAAACGACACTCCTTTTTTACCAACCCCACTTAACTTTACcccaaaatataataatacctCAACACCGCAGAAAATTCAAGTCAAAAATCTCCAATCGCTGAAAGAAATTCCTGATAACGAATTTACTGATGATGAACTCGAATGCAATGAAGAACCAATGGATCTGGTGCTAGATTTGAGTAAAAAGAAATCAGATAAGAAACCTAAAGCTGAAGACATTCCCGAAGATTTAACCAAAAAGAATGGCGAAACCAATATGAATATGAGCGATATTTTGGCCCAGCAGCTTCTTAAAAATACGCCTAAAATTGATCCAGCAGCACTCTACGCTTCGCAACTAGCCTTTTATCGTAATTTCACCAACTGGCCCACCTTCCCAATCAATCCTCTTCTCTTCCAATCCATGCCTTCACCTCTGCTTCAAGATGAAATGAAAGAAAGATTGCAACGTCTCCAGTTGTGCGGAGGTGGTATGATAATGGACGAGAGACTGAAGAATTTATATCCACCTTCCAACTATCCAGCTTTTCCTAACATAAAGTTAAACGAAAACAAATCTGAAATGTTTGCACAAATTTCCAAACCACCTCCAGAAATGCAACCGTTAAGCCTGAATATCGAAAATAATTTCAACGACTCCAAAATTAAAAGCCCTATTTTACAATCGAAAGCTGAATTATTGCAATCACCAAATTCCGTTAAAATGGTtattaaaaatggggttttaaTGCCGAAACAAAAACAACGAAGGTACAGAACTGAACGACCTTTCTCTTGCGAACACTGCTCCGCCCGATTTACATTGCGATCTAATATGGAACGCCACATCAAGCAGCAACATCCACAATACTGGTCACAAAGGCAGCGATCTTCAGTGGGAAATCCAGGACGTAAACAACAAATTCTACCACCAACAATCAAAAATAACATGTGCGAACTAAGCATACCAAACTACGAAGTACCAAAGATGACAAATATAGATGAGGCCAAAGATACCATTTCTGATAAGATTAAGTACGCAATTCTTGCTCAGCACTTAAGAAGCGCCCAAGAGGTGAAACTTGAGAAAAAAGAAGAAGATGATGATTGTGACTTAATTATTGACGAGAACGACGAAGTTCCTAAATCCGATACCGACACAGTTAATAAATCAAGaattttggaagaaaaattaCGAGAACTACATGACAAGCAATTGAACGAGAGAATTAAGAATGAAAAGATCAAGAGTGAAGAAGCCCAGGATTTAGTACCCGTGTCGCGGTTATTGGATAATGCTTCTCAACAACCTTTCAAAGATTATTTTAGAAGGGATCGTGAAGAACATGAAGCTGAAGGCATCAGTGAGGAAGATGAGGAGGGTTTGGTAGCCAGTGGAAGTACTAGTGAAGGACATTCTGGATCTGAAGAAAatagatcaGAAGGTGATAACATCTTAAATGAACCCGCTAAGAAGAAATCCGCTTACTCTTTAGCTCCGAATCGAGTAAGCTGTCCTTACTGCAGTCGCAAGTTTCCTTGGACATCATCATTGCGTCGTCATATATTAACCCATACTGGTCAAAAACCATTCAAGTGCAGCCATTGTCCTCTTCTCTTCACGACTAAATCCAACTGTGATCGTCATCTCTTGCGCAAGCACGGCAACTCCGCTACAACAATTTCCaccgaaaatttaaataacaacaACTTCATGATGCGCAATGTTCCTGAAAGGCCGTTCAAGTGCTCCAATTGTCCGAGCAGCACCTTTTCAACCTATTCGAATTTGAAGAAGCACATGATACATAAGCATGGTGCGCAAGATGACCGACAAGGTTATGAAGCTGGAAGTTCCgaagatgaaaaaaataatagtgaCCAGAAAAGCGATTGGGAGACCCAGATTACTCATTCCAGGCACACAAATGGTGTTGAAAATGTCGTGGTTAATTCAGATCTGCCTTTCAAGTGCCACCTTTGCGACAATTCATTTGGCGAAAGGCAAGATTGTTTGGAGCACATTAAAGATAAGCATGTGAGTGAGTACGAATTGTTGATGgcgaaaaatgctttagacgcAAACGCTTCAACACCGGATGAAGGAGGAAATCACGATGATGATGAGAGTGATATCAGAGGAAAATTTCCTGATTATTCGAATAGGAAGGTGGTTTGTGCTTTCTGTATGCGTCGTTTTTGGAGTGCTGAAGATTTAAGAAGACACATGCGTACACACACGGGTGAGCGTCCTTTCAGTTGTGATATTTGCAGAAGAAGATTCACTTTGAAGCACAGTATGTTGCGACATAGGAAGAAGCACAATATTACATCAGATGCTGAAAATCATGATAACGTGCATAGTGATGAAGAAGTAAAAGTCGAAAAGAATGATGAATCGGATGGTAACGAAGGAGGTAGTGATTTGATAAGTAATTTATTAGGGATTAGAGATCGATCTATTATAGAGCAAGTTTTAACATCATCTGCTGATGATGCAGCAAAGCTATTGGGTGTTGGTAGACAAGAATGA
Protein Sequence: MQGVLYIPPGPTGCTPRKESAMDLATEQLTKEINQSDSGIFSATNNTTCTTEETSNPTHQSDSDNRSDCSSPDRKYVCPICDTMLTSQHEFTLHIRSHNNDSEVQDPEKGYTCRICFKVLSSSSSLDRHVLVHSGERPFTCKHCGDTFTTNGNMHRHMRTHKSENYESDGSSDSNSSSKAIEYNNNKIDKYDNKRKAEDDTHMPLRKKPNLSEEIHENGDNFKCPICDRDDFISIKSLEMHLEDNHPDYPAKCHDCNRIFENNKILNFHRNTVHADENGKNKNSVVGFKDITFVDFSCKKFPHIARYECERNLHKVTAGPKYQCTKCSRAFPCDKSLEIHSKDCGTMNLSECSDFKSASYDGDIRRNDFFSRLDLQDNSPEKFRPFQEGSRKLQQRLLDGIKSDGSKDLADIQSIISMTSNGSLLQHLQGKNDISQNLDNDKNEEEETQDMFAQEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRTHLNSTNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNEEITKQLEHKKLNTSTNSIDSSDLSNDKIRCSTPKNIPAFPDLQKINPEIISKHKITPQAYTSITEIIQNENIKSLKDHRINDTPFLPTPLNFTPKYNNTSTPQKIQVKNLQSLKEIPDNEFTDDELECNEEPMDLVLDLSKKKSDKKPKAEDIPEDLTKKNGETNMNMSDILAQQLLKNTPKIDPAALYASQLAFYRNFTNWPTFPINPLLFQSMPSPLLQDEMKERLQRLQLCGGGMIMDERLKNLYPPSNYPAFPNIKLNENKSEMFAQISKPPPEMQPLSLNIENNFNDSKIKSPILQSKAELLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSSVGNPGRKQQILPPTIKNNMCELSIPNYEVPKMTNIDEAKDTISDKIKYAILAQHLRSAQEVKLEKKEEDDDCDLIIDENDEVPKSDTDTVNKSRILEEKLRELHDKQLNERIKNEKIKSEEAQDLVPVSRLLDNASQQPFKDYFRRDREEHEAEGISEEDEEGLVASGSTSEGHSGSEENRSEGDNILNEPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISTENLNNNNFMMRNVPERPFKCSNCPSSTFSTYSNLKKHMIHKHGAQDDRQGYEAGSSEDEKNNSDQKSDWETQITHSRHTNGVENVVVNSDLPFKCHLCDNSFGERQDCLEHIKDKHVSEYELLMAKNALDANASTPDEGGNHDDDESDIRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNITSDAENHDNVHSDEEVKVEKNDESDGNEGGSDLISNLLGIRDRSIIEQVLTSSADDAAKLLGVGRQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -