Basic Information

Insect: Stenus bimaculatus
Gene Symbol: su(Hw)
Assembly: GCA_963971135.1
Location: OZ020181.1:971444-974683[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1e-05 0.0016 20.1 0.5 3 23 161 182 160 182 0.95

2 13 0.0017 0.26 13.1 0.1 2 23 215 237 214 237 0.93

3 13 1.7e-05 0.0026 19.4 4.0 1 23 244 266 244 266 0.99

4 13 0.00013 0.02 16.7 2.0 1 21 272 292 272 293 0.94

5 13 1e-08 1.5e-06 29.6 1.1 1 23 304 326 304 326 0.99

6 13 0.00014 0.022 16.5 0.0 1 23 336 358 336 358 0.98

7 13 9.5e-06 0.0014 20.2 0.2 1 23 364 386 364 386 0.98

8 13 1.1e-05 0.0016 20.1 1.2 1 23 392 414 392 414 0.99

9 13 3.5e-06 0.00052 21.6 2.5 1 23 420 442 420 442 0.95

10 13 3.4e-05 0.0051 18.5 2.7 1 23 448 471 448 471 0.95

11 13 3.8e-05 0.0057 18.4 0.6 2 23 478 499 477 499 0.96

12 13 4.6e-06 0.00069 21.2 0.2 1 23 505 527 505 527 0.97

13 13 4.8e-06 0.00072 21.2 3.3 2 23 534 556 533 556 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1e-05	0.0016	20.1	0.5	3	23	161	182	160	182	0.95
2	13	0.0017	0.26	13.1	0.1	2	23	215	237	214	237	0.93
3	13	1.7e-05	0.0026	19.4	4.0	1	23	244	266	244	266	0.99
4	13	0.00013	0.02	16.7	2.0	1	21	272	292	272	293	0.94
5	13	1e-08	1.5e-06	29.6	1.1	1	23	304	326	304	326	0.99
6	13	0.00014	0.022	16.5	0.0	1	23	336	358	336	358	0.98
7	13	9.5e-06	0.0014	20.2	0.2	1	23	364	386	364	386	0.98
8	13	1.1e-05	0.0016	20.1	1.2	1	23	392	414	392	414	0.99
9	13	3.5e-06	0.00052	21.6	2.5	1	23	420	442	420	442	0.95
10	13	3.4e-05	0.0051	18.5	2.7	1	23	448	471	448	471	0.95
11	13	3.8e-05	0.0057	18.4	0.6	2	23	478	499	477	499	0.96
12	13	4.6e-06	0.00069	21.2	0.2	1	23	505	527	505	527	0.97
13	13	4.8e-06	0.00072	21.2	3.3	2	23	534	556	533	556	0.94

Sequence Information

Coding Sequence: ATGGAGGAGGAGAATCAAATTGGTGTTATTGGGAAGTTGGAACCTGTGGATGAAGATGAAGATTCGATGGAAATTGAAGAAGAAGACATCAAAGTCATCAATGTTTATCCTGATAACAACCAAAAAATAATGCAAGAACAAGTTACCTTGGAGAATACCGATGGGAATTTAGAAATTTCTACTTACAACCAAGAAGTGGAACAcagTGATGGAAATACGACTCATGTAATTATCACGGAAGATGGTACTTTCATGCAGGAAGGTACAACTGTCTATGTAGAAGAAGGGGAAGAATATGAAGAGACAGCTGAATATGAAGATGGTGATTATGAAGAAACGGTTTATGCTGAAGATCGCTACACTTTATCTGCTGATCAATTTGAAGATGAAGAAAGTAATAACGAAGATGATGATCCGGACGATCCAGATTTTGATGGTTCTTCGCAAGATAGTACGGATAAACCGGATGAAGAGAATCCTTGCACTATATGTCAACGAACCTTTAAAACAACAGCgagttTAAAGCGGCATATTACTGTAGTGCACAGTCAGGATGATTTCATGAATGACGATCCACTAACTTTTCAAGTTTGTGATTGCTGTGGTGAGCCTAACGATACCGCACATACTaacggTGATATTAAATGCGATTTATGCCCGAAACTATTCGTTTTGGAAAGTAATCTCGTGAGACATCTTGCTTTAGAACATCCGGATGAAAATGATATCTATAAATGTTGTGATTGTACTCGCTCTTTCTCCAGCAAAGAAGCTATGTCTAAACACATGATGTCACATCCGTTGGCAAAACCCTTCTCTTGCAAAGCTTGTAATAGGGATTTCACCCGGAAATACCATCTCGAGAGACATGTACAGCAGACTGGCTGTGATGGACAACCTGTTCGACAATTTAAATGTCAAGTTTGTGGTAAAGGCTTTAGCCGCAAGGATAATTTACGTGATCATTTAAGAATGCATGCAGGGCAGATAAAGAAAAAGAAAGTTTTCCCATGTCCTTATTGTGCTAAAGAGTTTCAAGGAAGTGCTCTACTTGTCGTGCATTTACGAACACACACaggcGAACGTCCTTACCCATGTGATATGTGCCCGAAACGATTTCCTTCAAGTGGTGCAATGAAAAAGCATCGACGTGCACACACAGGTGAAAAGCCTTATCAATGCATGGAAtgcaaAAGAAGGTTTGCAGCTAAGGAAACTTTAAACCGACATGTGCGTACTCATACAGGTGATAAACCACACAGCTGCACTTACTGTGGGAAATCTTTCATACAAGCAGCACAATTGCGGGCGCATATTTTCCACCATACTGGAGAAAACGCGTTTACTTGCCCTCACTGCAACCGCGCTTTTAACCGACGAGTTCGTCTTACCACACATATAAAATTTGTGCATGAAGGAGCTGAACCGATGCAGTGTTCCCAGTGCCCTCGCACATTTTATCGAAGAGAGGACTTGGCTAGACATGAGAATTTACACTCCGGTGAAAAACcttTCGCTTGTGAGATATGCGAGAAACGGTTTGCAGTAAAGGCATCCTTAAAACTCCACATGCTGACACACCGCAAAGAACAACCTTGCTCCTGTGATGAATGTGGTCGTGCATTTATTCGACAAGATTGCCTAATGCGTCACATGAGGGCTAAGCATCGGGATGTTTTGGAAGATATAATGGCAGGAGCCGAAAAGAGGCGGTTGCAGGAACAATTATTAGATTCCTGCAAGAAAGAAATTCCTGATTCTGATATTTGGACTGAATTAACTTTAACAGATTCGATTAAAGAGTTGTTGGGCTTATTAGTTGACGAAAACACCTTGAATGCCTTTGGTTGGCCAGACGCGCCagttgataaaattttagatgCAGTAATTAAGCGGTGTGGACATGATCCTGCTTCTGATGAACAATTTGATTATATTAGTCGCATGAGAGAAAATGCAAAGCTTTTATTCACTGTGGTCATTGATGATCAGGCTGTTAAATCACTACTTAATAATCAAACTGTTGATGAAGTTATTCAGCATGTGTTAAAATTGGCTAAAagcgattaa
Protein Sequence: MEEENQIGVIGKLEPVDEDEDSMEIEEEDIKVINVYPDNNQKIMQEQVTLENTDGNLEISTYNQEVEHSDGNTTHVIITEDGTFMQEGTTVYVEEGEEYEETAEYEDGDYEETVYAEDRYTLSADQFEDEESNNEDDDPDDPDFDGSSQDSTDKPDEENPCTICQRTFKTTASLKRHITVVHSQDDFMNDDPLTFQVCDCCGEPNDTAHTNGDIKCDLCPKLFVLESNLVRHLALEHPDENDIYKCCDCTRSFSSKEAMSKHMMSHPLAKPFSCKACNRDFTRKYHLERHVQQTGCDGQPVRQFKCQVCGKGFSRKDNLRDHLRMHAGQIKKKKVFPCPYCAKEFQGSALLVVHLRTHTGERPYPCDMCPKRFPSSGAMKKHRRAHTGEKPYQCMECKRRFAAKETLNRHVRTHTGDKPHSCTYCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHIKFVHEGAEPMQCSQCPRTFYRREDLARHENLHSGEKPFACEICEKRFAVKASLKLHMLTHRKEQPCSCDECGRAFIRQDCLMRHMRAKHRDVLEDIMAGAEKRRLQEQLLDSCKKEIPDSDIWTELTLTDSIKELLGLLVDENTLNAFGWPDAPVDKILDAVIKRCGHDPASDEQFDYISRMRENAKLLFTVVIDDQAVKSLLNNQTVDEVIQHVLKLAKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -