Basic Information

Insect: Stenus bimaculatus
Gene Symbol: -
Assembly: GCA_963971135.1
Location: OZ020187.1:24228818-24233670[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.8e-05 0.015 17.1 2.4 1 23 391 413 391 413 0.97

2 18 0.00019 0.029 16.1 1.3 1 20 419 438 419 441 0.93

3 18 7.3e-06 0.0011 20.6 1.4 1 23 447 469 447 469 0.98

4 18 7e-06 0.0011 20.7 3.4 1 21 475 495 475 497 0.94

5 18 3e-05 0.0045 18.7 4.6 1 23 503 525 503 525 0.99

6 18 0.00011 0.016 16.9 5.6 1 23 531 553 531 553 0.97

7 18 3e-07 4.5e-05 25.0 5.0 1 23 559 581 559 581 0.98

8 18 1.1e-07 1.7e-05 26.3 2.7 1 23 587 609 587 609 0.98

9 18 8.1e-05 0.012 17.3 6.7 1 23 615 637 615 637 0.97

10 18 1.3e-05 0.002 19.8 5.5 1 23 643 665 643 665 0.97

11 18 5.2e-07 7.9e-05 24.2 2.8 1 23 671 693 671 693 0.98

12 18 7.4e-06 0.0011 20.6 7.9 1 23 699 721 699 721 0.98

13 18 3.1e-05 0.0047 18.6 9.1 1 23 727 749 727 749 0.98

14 18 4.7e-05 0.007 18.1 7.5 1 23 755 777 755 777 0.98

15 18 7e-06 0.001 20.7 7.2 1 23 783 805 783 805 0.97

16 18 2.9e-05 0.0044 18.7 0.8 1 23 811 833 811 833 0.98

17 18 0.029 4.3 9.3 5.1 1 23 843 865 843 865 0.98

18 18 1.8e-06 0.00027 22.5 0.8 1 23 871 893 871 893 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.8e-05	0.015	17.1	2.4	1	23	391	413	391	413	0.97
2	18	0.00019	0.029	16.1	1.3	1	20	419	438	419	441	0.93
3	18	7.3e-06	0.0011	20.6	1.4	1	23	447	469	447	469	0.98
4	18	7e-06	0.0011	20.7	3.4	1	21	475	495	475	497	0.94
5	18	3e-05	0.0045	18.7	4.6	1	23	503	525	503	525	0.99
6	18	0.00011	0.016	16.9	5.6	1	23	531	553	531	553	0.97
7	18	3e-07	4.5e-05	25.0	5.0	1	23	559	581	559	581	0.98
8	18	1.1e-07	1.7e-05	26.3	2.7	1	23	587	609	587	609	0.98
9	18	8.1e-05	0.012	17.3	6.7	1	23	615	637	615	637	0.97
10	18	1.3e-05	0.002	19.8	5.5	1	23	643	665	643	665	0.97
11	18	5.2e-07	7.9e-05	24.2	2.8	1	23	671	693	671	693	0.98
12	18	7.4e-06	0.0011	20.6	7.9	1	23	699	721	699	721	0.98
13	18	3.1e-05	0.0047	18.6	9.1	1	23	727	749	727	749	0.98
14	18	4.7e-05	0.007	18.1	7.5	1	23	755	777	755	777	0.98
15	18	7e-06	0.001	20.7	7.2	1	23	783	805	783	805	0.97
16	18	2.9e-05	0.0044	18.7	0.8	1	23	811	833	811	833	0.98
17	18	0.029	4.3	9.3	5.1	1	23	843	865	843	865	0.98
18	18	1.8e-06	0.00027	22.5	0.8	1	23	871	893	871	893	0.96

Sequence Information

Coding Sequence: atgaATTCCGGTGAAGCGGATTCACTTACAGGGCCTTTAGCTGCCAATGGATCAAATCAAagctCACAAAGACCACCACCTTCAACAAGTGCAGCTACTGATTTACGAGTAAATACTACTGCTTTAAATGCTGTAGCATTAAGTAGTGTTGCTAAGTATTGGGTACTTACTAATTTACTTCCTGGTCCAATACCACAAGTGTCCGTTTATGGACTACCAGGAGCAAGAACGGATAATCAGGGAAAATTATCGcaggatGCAATGATTTCGCAACACGGAGGTATAATTACGCCCGATAACATCCTCCTACCTCACAATTCTCAAATGCCATCGATATCAACATCAAACATCACTATTCCAACGAGTACGATGCATATCGATTCACATCAAAATCAGGGTCAACACAATCAGCTTAATAACCATCAACAACAAAATGACAACCAATCAATGGTGTCGCAGAATCAACATGGGCAGCAAATACAACAGCAGAATCAAAATATGGTTCAAGTTCAAGTGCAGGATAATCTCGTTTCAGTGATTGAAGATAATAAAGAGCATAAGGATATGCTGCATTCGCAGTTATCGATAGAAAATCAGCAACAATTGGCGCATCAAGCTCTTACAGCGCAGCACTTGCAACATCAGCTTCAAGTGCAGCAAGTTTTGGATAATGTTGTTAGAATGGAAACGGATCAAGGGCAAAATAATGAAGACCCGATGTCAGACAATATGCAAATTAAggatgaaaataaagttttacaaaattgtacCAAACTTTTAAGCGCACAATTTGGATTACAGGAGGTCAAAGCTAACTTAATGGACGTACGAGGGCCTGATGGAAATATCGTAAAAGTTTCTACAgGAGTTCAAGATCAAGATTTGGTAAAAAATATAGGTGTGGAAATGGTGCAAAATATGTATAAAGTGAATGTTGAGGATATCAATCAACTTCTGGCGTATCATGAAGTGTTTGGGAAATTACAGGGTGAAATTAGTGGCGCTGGTAATAATTTGGttcaaaatacaaataataccaacgttaatatacagggtggtgttgtaaataatttaccTACAGTAAAAACGCTGGAAAATGAGCAAGAACCTTCAACTAGTGGTACTATTAATCAAGATAGCCCACCTACCGTTTTAACGGCTgcaggaTCTCACGTTTGTGATCTTTGTGGGAAGATGTTCCAGTTTCGGTATCAATTAATCGTGCATCGTCGTTATCATACTGAAAGAAAACCATTCACGTGCCAAGTTTGTGGAAAGGCGTTTACAAATGCTACAGAGTTAGGTCGTCACGGTAAATGCCATTTAGGTGGTAGTATGTTTACCTGCACGGTTTGCTTTCATGTGTTTGCCAACGCTGCATCTCTCGAAAGGCATATGAAACGACATTCGACTGATAAACCGTATGCATGTAGTATATGTGGTAAATCTTTCGCTAGAAAAGAACACTTGGAGAACCATACTAGGTGTCACACAGGCGAAACTCCTTATAGATGCCAGTATTGTGCGAAAACCTTCACACGTAAAGAGCACATGGTTAATCATGTAAGAAAACACACGGGTGAAACCCCACATAGGTGTGAATTGTGCAAAAAATCATTTACACGAAAGGAGCATTTTATGAACCATGTTATGTGGCATACCGGTGAAACGCCGCATCAATGCACGATTTGTGGTAAGAAATACACGAGAAAAGAACATCTCGCCAATCACATGCGGTCCCACACAAACGACACTCCATTCAGATGTGAAATTTGCGGCAAGTCATTTACTCGAAAAGAACACTTCACGAACCACATTATGTGGCATACAGGTGAAACCCCTCATCGTTGtgacttttgttcaaaaacctTCACCCGAAAAGAACATTTACTTAATCACGTTAGACAACACACAGGTGAATCTCCACATAGATGTGCCTATTGCTCGAAATCCTTCACTCGAAAGGAGCATTTAATTAACCACGTCAGACAACATACCGGTGAAACCCCATTTAGGTGTAGCTACTGCCCGAAGGCTTTCACCAGGAAAGATCATCTTGTTAATCACGTCAGACAACACACAGGCGAATCTCCACATAAATGCACTTATTGCACGAAAAGTTTTACTAGAAAAGAACACTTGACTAACCACGTAAGACAACATACTGGTGAATCACCTCATAGGTGTCACTTTTGTTCGAAAAGCTTCACCAGGAAGGAGCATTTAACCAATCACGTGCGAATACACACCGGCGAATCTCCACATCGCTGTGAATTTTGCCAAAAAACTTTTACAAGAAAAGAACACCTGAGCAATCATTTACGGCAGCACACTGGAGAAACCCCTCATTGTTGTAATATTTGCTCGAAACCTTTCACAAGAAAGGAGCATTTAATTAATCACATGCGCTCACATACAggtgAGCGGCCTTTTACTTGCAACGAATGTGGAAAATCATTCCCGTTGAAGGGGAATTTATTGTTCCACCAAAGATCACATAATAAAGGTGCTGGCGCTGAAAGACCTTTCCGTTGCGATTTGTGTGATAAAGATTTTATGTGTAAGGGGCATTTAGTATCGCATCGGAGATCACACAGTGGGGAACGACCACATGCTTGTCCTGATTGTGGACGCACTTTCGTTGAAAAAGGAAATATGTTACGgcaTTTGAGAAAGCATGCGACCGAAAATCTACAAGATGCGAGTGGGCTTGCAGCGAATGTTCCTCAAAATCAGGCATCTACAGCTGGTCCACCTCAAACGAGTGCAGCGAATGTGCAGTTACCACAAGTATCTCAGGCAACTTCATTGGCAAGTCCGGTGACTTCAGGTCCGATTGTTCAGAGTTTAAATATGCACCAGCAAAATCCACACCCAGTAGTGGTTCCGACGGCTAATGTGAACGTTCTTGCgtcttattaa
Protein Sequence: MNSGEADSLTGPLAANGSNQSSQRPPPSTSAATDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGARTDNQGKLSQDAMISQHGGIITPDNILLPHNSQMPSISTSNITIPTSTMHIDSHQNQGQHNQLNNHQQQNDNQSMVSQNQHGQQIQQQNQNMVQVQVQDNLVSVIEDNKEHKDMLHSQLSIENQQQLAHQALTAQHLQHQLQVQQVLDNVVRMETDQGQNNEDPMSDNMQIKDENKVLQNCTKLLSAQFGLQEVKANLMDVRGPDGNIVKVSTGVQDQDLVKNIGVEMVQNMYKVNVEDINQLLAYHEVFGKLQGEISGAGNNLVQNTNNTNVNIQGGVVNNLPTVKTLENEQEPSTSGTINQDSPPTVLTAAGSHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNATELGRHGKCHLGGSMFTCTVCFHVFANAASLERHMKRHSTDKPYACSICGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCELCKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLSNHLRQHTGETPHCCNICSKPFTRKEHLINHMRSHTGERPFTCNECGKSFPLKGNLLFHQRSHNKGAGAERPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGRTFVEKGNMLRHLRKHATENLQDASGLAANVPQNQASTAGPPQTSAANVQLPQVSQATSLASPVTSGPIVQSLNMHQQNPHPVVVPTANVNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -