Sbim025266.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- ZFY
- Assembly
- GCA_963971135.1
- Location
- OZ020183.1:4773013-4781687[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.00015 0.023 16.5 0.8 2 23 99 120 98 120 0.96 2 26 0.00049 0.073 14.9 0.9 1 23 126 148 126 148 0.98 3 26 4.1e-05 0.0062 18.2 0.2 2 23 154 175 153 175 0.96 4 26 0.00027 0.041 15.7 0.9 1 23 181 203 181 203 0.98 5 26 0.032 4.8 9.2 1.3 2 23 220 241 219 241 0.96 6 26 6.2e-05 0.0093 17.7 6.2 1 23 265 287 265 287 0.98 7 26 1.1e-05 0.0017 20.0 1.7 1 23 293 315 293 315 0.98 8 26 3.8e-05 0.0058 18.3 1.4 1 23 321 344 321 344 0.97 9 26 0.12 18 7.3 4.1 1 23 354 377 354 377 0.96 10 26 4.4e-05 0.0066 18.2 0.3 1 23 461 483 461 483 0.98 11 26 8.3e-07 0.00012 23.6 4.1 1 23 489 511 489 511 0.99 12 26 0.0041 0.62 11.9 0.8 1 23 516 538 516 538 0.98 13 26 0.00092 0.14 14.0 0.3 1 23 550 572 550 572 0.98 14 26 7.2e-05 0.011 17.5 3.1 1 23 622 644 622 644 0.99 15 26 2.9e-06 0.00044 21.9 0.2 1 23 650 672 650 672 0.98 16 26 0.00035 0.052 15.3 3.7 1 23 678 700 678 700 0.97 17 26 0.00097 0.15 13.9 2.4 1 23 706 729 706 729 0.98 18 26 0.053 7.9 8.5 1.9 1 20 945 964 945 966 0.94 19 26 0.041 6.1 8.8 2.7 1 23 986 1009 986 1009 0.92 20 26 1.3e-05 0.0019 19.8 1.5 3 23 1020 1040 1019 1040 0.97 21 26 2.7e-06 0.0004 22.0 2.5 1 23 1046 1068 1046 1068 0.98 22 26 0.15 23 7.0 3.5 1 23 1076 1098 1076 1098 0.97 23 26 0.0066 0.99 11.3 5.5 1 23 1104 1126 1104 1126 0.97 24 26 0.0055 0.82 11.6 0.7 1 23 1238 1261 1238 1261 0.96 25 26 0.0045 0.68 11.8 1.2 1 23 1264 1286 1264 1286 0.97 26 26 0.0023 0.35 12.7 0.1 1 23 1292 1315 1292 1315 0.97
Sequence Information
- Coding Sequence
- ATGAATACTGAGTGGATTTTACAAAATGATCAACCTATTTATGTTACTTTACCCTATGGAAGTTTACAAAATTCCGAGTCCATAATACTAGGATCGAACGTTTATAAGATTATTAAACACGATAAAGAGATATTTAATATTGGAGAACCTTCAGAAGCAGGAACTATTTTCATTCAGCTGTCAGActgtgataaaaaaaatttaaacggCAATGTTGAAAGTATTCCAAATGTTATAAACGAGGAAATACCGAAAATATGTGAAAATAATTCAACGAAAACGAGTACTCCTATAAAATGCCAGTTATGTGATAAAACATTTGCGAAAGTATCGCAATATCGGCTTCACATGCAAGaccataaaaataccaaaaagtttaaatgCACTCAATGTTCCGAAAGTTTTAATattgaaagtaattttaaaattcatttagcTAGTCATAAAAATGGATCACTTGAGTGTCCGATTTGTAATCGTTCATTTCAGAGGCTAGCTAGTTTAAAGTCACATTTACTTTTACATCAAGTCGAGGAGACTTATAGTTGCAATGAATGTTTGATGGAATTTTCTAAAGAGGAACATTTAAAAGATCATATGGAAGTGCATAAAGACGATCAAATTAATAGtgctgaaaaaaatgaaaaattaccttTAGTTTGTTCTTATTGCAATCACATTTTTCAGGATTTAACTAAGTATAAAGAACACATTTTACTTCATAATAAAgcaaaaaaattgataaatagtGGAAAACgaactaaaagaaaaaaaaatactagaaaTAAAACACATAAATGTGATATTTGTACTAAAACGTTTTCAAAATCGTGTTTATTAGAGCGACATCGACGAGTGCATACTGGAGAAAAACCATTTACAtgTCATCTTTGTAATCGAGCATTTTCACAAAATGGTAGTTTACAAATTCATTTAGATAAACATGAAGGAAAAAAACCGTTTCAATGCTTACTGTGTCCTTCCAAGTTTTCACAAAAAAGTAATCTAAAAACGCATATTGAAAAAAGTCATATGATTTCATCACCAGGAGATAAAGTTTATAAATGTTCACAATGCacttgtattttcaaaaaagtttcgaCTTTAAACGGACATGTAACTAAATTCCATTCTGGTTCCTCAAATGATTCAAATTCGGAAATAGCTTCTTTAATAGACCAGTTAAAGGAGTTGGATAAACAAGCTAATCCTGTTAAAAGAAAAGAAGACGTGACTATACCCGTTATTAATAAAGAAACACATGAAAttccaccaaataaaaattctacagaaatttttgttaaaatgacGGATACTAGTATAGACGGTACGGTTCGACGATACGTATTTCGTCAACAACAAAGAGGGGATACTAGATGGTACATTTGTTCATATTgcattaaagaatttaaaaaaccttCCGATTTAATTCGCCATGTTCGAATACATACGAAAGAAAAACCTTTTAAATGTACCGATTGTGGACAATGCTTTGCACAAAAATCTACTTTAACAAATCATCAAACTACACACACTGGTAAAGATTTCGAATGTGCTTTgtgtttacaaaaatttagcATGTTACGCAgtttaaatattcatttaagAAAGCATGATGAGACAGCAGTAGCAAGACGAACTGCGAATTATAAATGTTCGGTATGTGAAAAAGCGTTTTTTAATGTACAAGATGCAGAAAAGCATATGTCGGTACATGAAGTATCCTATATTATTAGGCCTGataatggtaatttaaaattaaatatgaggGAACCGTTAGTAGAAACGGagaaaggtaTCCAATCTTTGACACCAAGGGTAAAAATTCCTTACGCAAGCATGGATCAAtttaaaaatcgaccatttcgtTGTCATGTTTGTACAGCTGCTTTTACCAGAGGCATTCATTTAAACAGACACATGTTAACTCATTCAGGTGTTAAATCTTTCCGATGCGACATTTGTTCTAaaatgtttGCAACCAAGTATGCTTTAGCTGAACAcataaaaattcatacaaaaactaGAAATCACGAATGCAAGTTTTGCAACAAACGTTTTTTTACAAATGCTGTGCTTAAAAATCATATGTTAATGCATAGCTCCGTAAAAAAGTACATTTGTCCTTATTGCAATAACAGGTTTAAGCGGGCGGTACTTTGCCGAAAGCATATTCGTACGGTACACACAAAAGAAAAAGAATTGgatTGTACCCCAGTAGTCGAGAGTAATAATGAAGATTCAGTAATGGAAAATGAAATTTCtgttgaaaaagaaaaagatcAAACTATAAATGacccaaatcaaaattttgttaattttaccaTTTCTGATTCAACAGTTGAAACACCTattatttataataatgattCAGATATAAATTTGAACATTTCCAATTTAGGAGTTGGTTCAAATTATGAGGAAATCGttagtaattttaatgatataaaTtCAACAAATCCTCAAATAATAGCCATTAATAATACAGCGAATAGTGATGAACCAactattttttatcaacttaATCCTGAAGAATTGAAAGGAGCAAATCAATTAATGGATGTTTATAATTCGAACATAATTTTTGCTCCAAGTAATATAAACGTTAGCTTAGGCGATAATGTAAATATCTTGGATGGAAATAATGTAGTTAACACGACGGGGAAAACCATTGAAGATCAAACTTTAGATCTAAATAATCTAAATATTATTAATCCGGAAGAAATTAGAGATCAATCAAAAATCAAAGAAccaaatattgatttttataacattaatttatcacatttcATTGCTAATGAAAACCCGGTTAGTTTATTGACTCAAAAAGATTATTCCTGTAATctgtgtaaaataaaatttaaagcttttgatgatttaaaaaatcatgtgtGCAATAATGTAATTGAAACACCAGTGGAACAAAAAgttaCAAAAAGTgggcaaaaaaatcaatttaaatgcCAATATTGCAGAAAAAAATTCCTtacaaataaatctttattgcaACATAACGCTAAGGCACATGCAAACAAAACAGTTGTTTCAGATAAGATTTGTTCGTTTTGTtcaaaggtttttaaaaaatcctatGATTTGaaacgGCATGTTAGAATACATACAGGTGAAAAACCATTTCCTTGTGAAAAGTGCGAAAAAAGCTTTTCTCTTAAATCTACGTTAAGAACCCACTATCGCACGCATGATCCTGTAGTGATTAAGGATTTTAAATGTTACGTGTGTGACGCGTATTTTAGCTGTAAATCAAGTTTGAGAATTCACACATTCATACATACCgatACAAAACCATATTCGTGTGATTTATGCTCGACTACATTTAGAACTGCTCACCACAAGAAAAATCACATGGTATCACATCAAAGGAACAATAGATTAACGCCCAAAAACAACACTgtgaatttattagaaaatttggTTTTAGAATCGcataatgatttaaaaaagaCTAGAGATGAAGCTTTAAATGAAGTATTACCCGAAGAAATATTACTAGATGAGATTCAACAAGCGACTCAAAATCTTATAGCGAGTGATTTAACTAATTCCGATAATTTAGACTTGGGCGAAAGTTTGCAGTTAGATCCAATTCTTCTTCAATTTCAATCTAATAACTACAACCTTGAATTACCTTACGAATTTGATATTAAAGCTCCTGAATGTCCAGATAATACAGGCATCGAGATTGCTAAATTTCAATGTGATATTTGCTTGAAGCTTTATGCTACCAAagatgttttacaaaaacacaaaaagaatgttcataccaaatttcaatgCGATAAGTGTTCTAAAACGTTTTTAACTGTAGAATTGTTGGAAAAACATTCTAGACTGCACTCTGGGTATAGGCCATTTTCGTGTTCAATATGTGCTAATAGCTTTGCAGAAGAAGccgatttaaaagtacatttaagaagGATACATCAAGttattaaaagttaa
- Protein Sequence
- MNTEWILQNDQPIYVTLPYGSLQNSESIILGSNVYKIIKHDKEIFNIGEPSEAGTIFIQLSDCDKKNLNGNVESIPNVINEEIPKICENNSTKTSTPIKCQLCDKTFAKVSQYRLHMQDHKNTKKFKCTQCSESFNIESNFKIHLASHKNGSLECPICNRSFQRLASLKSHLLLHQVEETYSCNECLMEFSKEEHLKDHMEVHKDDQINSAEKNEKLPLVCSYCNHIFQDLTKYKEHILLHNKAKKLINSGKRTKRKKNTRNKTHKCDICTKTFSKSCLLERHRRVHTGEKPFTCHLCNRAFSQNGSLQIHLDKHEGKKPFQCLLCPSKFSQKSNLKTHIEKSHMISSPGDKVYKCSQCTCIFKKVSTLNGHVTKFHSGSSNDSNSEIASLIDQLKELDKQANPVKRKEDVTIPVINKETHEIPPNKNSTEIFVKMTDTSIDGTVRRYVFRQQQRGDTRWYICSYCIKEFKKPSDLIRHVRIHTKEKPFKCTDCGQCFAQKSTLTNHQTTHTGKDFECALCLQKFSMLRSLNIHLRKHDETAVARRTANYKCSVCEKAFFNVQDAEKHMSVHEVSYIIRPDNGNLKLNMREPLVETEKGIQSLTPRVKIPYASMDQFKNRPFRCHVCTAAFTRGIHLNRHMLTHSGVKSFRCDICSKMFATKYALAEHIKIHTKTRNHECKFCNKRFFTNAVLKNHMLMHSSVKKYICPYCNNRFKRAVLCRKHIRTVHTKEKELDCTPVVESNNEDSVMENEISVEKEKDQTINDPNQNFVNFTISDSTVETPIIYNNDSDINLNISNLGVGSNYEEIVSNFNDINSTNPQIIAINNTANSDEPTIFYQLNPEELKGANQLMDVYNSNIIFAPSNINVSLGDNVNILDGNNVVNTTGKTIEDQTLDLNNLNIINPEEIRDQSKIKEPNIDFYNINLSHFIANENPVSLLTQKDYSCNLCKIKFKAFDDLKNHVCNNVIETPVEQKVTKSGQKNQFKCQYCRKKFLTNKSLLQHNAKAHANKTVVSDKICSFCSKVFKKSYDLKRHVRIHTGEKPFPCEKCEKSFSLKSTLRTHYRTHDPVVIKDFKCYVCDAYFSCKSSLRIHTFIHTDTKPYSCDLCSTTFRTAHHKKNHMVSHQRNNRLTPKNNTVNLLENLVLESHNDLKKTRDEALNEVLPEEILLDEIQQATQNLIASDLTNSDNLDLGESLQLDPILLQFQSNNYNLELPYEFDIKAPECPDNTGIEIAKFQCDICLKLYATKDVLQKHKKNVHTKFQCDKCSKTFLTVELLEKHSRLHSGYRPFSCSICANSFAEEADLKVHLRRIHQVIKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -