Sbim032200.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963971135.1
- Location
- OZ020184.1:12689510-12700425[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-14 2.3e-11 44.9 0.1 3 44 592 633 590 635 0.95 2 2 5.3 8.5e+03 -1.7 0.9 6 17 740 751 739 754 0.88
Sequence Information
- Coding Sequence
- ATGATTGCATTTGGACCTAAAAAGGACGGGAGTCCTAATATAAAGTATTTTGAATCTGCGGAAACTTTATCATCCCTGGAAGTAGTGAAATTATGGCTTCAAAAGAATGCAAAAAAGcTGATTCAATCGGACCCACCCACAAATAAATCACTTTCAACGCTCGTCATCCAACTGCTACAATTTCAAGAAGACAGTTTGGGAAAGAACATACAAAAACCTTCAATGACAAGGATTCCTGTTAAGTTTTTCATGGATTTTAAACCTGGAGGTGCTTTATGTTTAATGCTTATGACTACGTACAGATTCAAATGTGAACAAGGATGGCGTAAAATTGAATTCCAAACAAACAAAAATCCAGGtcgtcttgaaaaactaatagAAATGTTCCAAGCCATGGAGAAGACATTAATTCAGAATAAGTTGTATACTTTACCTGTTATTTATGTGAAACCAGAAGTGGATAAAAATTTAACGtccaaattaaaagaaattgtgAAGAAACACAATGGGCAAGTGGTTGACAACGAAATGGCTGCCACACATATACTTTATCCTCATTGTGATCCTCTTGAAGAAGAATATGCTCGTCCTGGAATGAAACAAGATAAAATGGTGATGATGCATTGGTACTACTTTCCGGAATCATACGACACATGGGTTAACATTGAAGGCACACTGgaaggTTTAATCCAAGAATCTCCATCAGTACACACTGGAGTGTGGAGAGTGTCATCAACATGGTTATTAGATTCGGAACAGTACAACGAGTGGATGGCGGAGGAGGATTATGAAGTAGATGAAAGTGGTAGGAAGAAGATACACAAATTACGTTTATCAGTTGAAGATCTTATGAATCCTATGAGCGAAACCGATAAAAACAAgaAGAAAACTAAGCGTAAACGATCACCATCCCCACAATTGAAAACAGGAAAACGTAAAAGTGGTCGCAGCCCAGCAGTTGGTAAAAAACCAAGACCTGAAGATGCAGAATCGGAGGATTTGACCAAAGAAATGGAAGATCCATTACCTGAAGCTAATATAGTTGAAGTAAATCCTACAATCACTGGTCAACCAGGAAAGAAAGATCATGAATTGCAGCCTCTTAAAGGGGGATCTATTACGGATATGGATGATACAGAAGAGCGGTGTGAGGACTCTCAAACCGGCAAGAATTCGGATACTACAACTCAAGATGAAGGCCAGGAAGATAATGTTACTGAACAAACTCATCATATTATTGTTCCCTCATATTCAGCATGGTTTGATTATAACGCAATACATGAGGTAGAAAAACGAGCACTGCCAGAATTCTTTAATGggaaaaacaaatcaaaaactCCTGAAATCTACCTGGCATACAGGAACTTCATGGTTGATACCTATAGATTAAACCCAACAGAATATATTACAAGTACGGCATGTCGTAGAAATTTAGCTGGAGATGTATGTGCTATCATGCGAGTACACGCTTTTCTGGAGCAATGGGGACTGATAAATTATCAAGTTGATACAGAATCAAGACCTACACCAATAGGACCACCCCCAACTTCACATTTCCATATACTTTCCGACACACCATCTGGTCTACAACCCATTAATCCACCTAAAACACCTCAACCTAGTGCTGCTAAAACCTTACTCGATTTGGATCGATCACAAGATACGAAAAAATCTGAAATGGTAGACTCAATATCTAGTTTTGGATTGAAACTTGATCAATATACTAAAAAGACTGGtgctctaaaaaataaaaatgctgcTTCTCTGACACGAGATTGGACCGAACAAGAAACTCTTCTGTTATTAGAGGGTCTTGAGATGTACAAAGATGATTGGAATAAAGTTTGTGAACATGTTGGTTCTCGTACTCAAGATGAGTGTATTTTGCACTTCTTAAGGCTTCCTATCGAAGATCCCTACTTGGAGGATCCTGAAGCAGGAGGTGCTTTGGGACCTTTGGCCTTCCAACCGATTCCATTTAGTAAGGCCGGTAATCCAATAATGTCAACAGTTGCATTCCTTGCTTCCATTGTCGACCCCAGAGTGGCAGCTGCAGCTGCAAAATCAGCAATGAATGAATTTGCAAGTATCAAAGATGAAGTACCTGCAGCATTAATGgatgcacatttaaaaaatgtggaagCATCGTCTGCTGATGGAAAGTACGATCCTGCTGCTGGACTAGCTCTTAGTGGAATTGCTGGAACTGTTCCTGACAAAGAGGAAGATGACAAGATTAAAAAGGAGGTCGAGGTAAAGGAAGAGGATAAAACTGAAAATCTAGAAACAAAAAAGAATGGTTTGGAAGGTGGGGAGGACAATAAACAAGAGGTGGTGAAGGCAGTAAAAGTGGAAACGCAAGATAGTGACAAAGAAGATCGAATGGACACAtcagaaattaaaactgagAAAGTGGTAAGAGACAGTGAAATGCAAAGTGCCGCAGCTGCAGCTTTAGCAGCAGCTGCAGTTAAAGCGAAACATTTGGCGGCTGtagaagaaagaaaaattaaatctcTGGTGGCACTTTTAGTGGAAACACAAATGAAAAAGTTGGAAATTAAATTGCGTCACTTTGAAGAACTTGAAACGACAATGGAACGTGAAAGAGAAGGGCTAGAATATCAAAGACAGCAGTTAATTACAGAAAGGCAACAGTTTCATTTAGAACAACTAAAAGCTGCTGAATTTAGAGCAAGACAGCAAGCTCATCAAAGGTTACAAGCTGAACAGGGTCAACAGTGGGTGCAACAGCAACCTTCTATTCAACACTCTGCATCTTCAGATACAGGTCCAAGTTCCACACCTACCCCACCTTCTCCACAAGCATCGGCTGTTGCGTCTCCAGCTCCAGCACCCCATCATCATATTTAG
- Protein Sequence
- MIAFGPKKDGSPNIKYFESAETLSSLEVVKLWLQKNAKKLIQSDPPTNKSLSTLVIQLLQFQEDSLGKNIQKPSMTRIPVKFFMDFKPGGALCLMLMTTYRFKCEQGWRKIEFQTNKNPGRLEKLIEMFQAMEKTLIQNKLYTLPVIYVKPEVDKNLTSKLKEIVKKHNGQVVDNEMAATHILYPHCDPLEEEYARPGMKQDKMVMMHWYYFPESYDTWVNIEGTLEGLIQESPSVHTGVWRVSSTWLLDSEQYNEWMAEEDYEVDESGRKKIHKLRLSVEDLMNPMSETDKNKKKTKRKRSPSPQLKTGKRKSGRSPAVGKKPRPEDAESEDLTKEMEDPLPEANIVEVNPTITGQPGKKDHELQPLKGGSITDMDDTEERCEDSQTGKNSDTTTQDEGQEDNVTEQTHHIIVPSYSAWFDYNAIHEVEKRALPEFFNGKNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTPIGPPPTSHFHILSDTPSGLQPINPPKTPQPSAAKTLLDLDRSQDTKKSEMVDSISSFGLKLDQYTKKTGALKNKNAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAFQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAALMDAHLKNVEASSADGKYDPAAGLALSGIAGTVPDKEEDDKIKKEVEVKEEDKTENLETKKNGLEGGEDNKQEVVKAVKVETQDSDKEDRMDTSEIKTEKVVRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQQWVQQQPSIQHSASSDTGPSSTPTPPSPQASAVASPAPAPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902171;
- 90% Identity
- -
- 80% Identity
- -