Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963971135.1
Location
OZ020180.1:40291919-40300510[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6 9.7e+03 -1.9 0.0 4 14 72 82 71 84 0.84
2 6 6.3 1e+04 -1.9 0.1 36 45 266 275 250 276 0.72
3 6 2.3e-07 0.00036 21.9 0.0 1 42 282 325 282 329 0.89
4 6 7.3e-06 0.012 17.1 0.0 3 44 337 382 336 384 0.88
5 6 1.1e-14 1.8e-11 45.3 0.0 1 46 391 436 391 436 0.97
6 6 2.4e-07 0.00039 21.8 0.3 2 44 445 487 444 489 0.87

Sequence Information

Coding Sequence
ATGTTAAATTGTTGGGCTAACAGTGATTCTGAAGACTCTGAAgacgaagatgatgatgatgatgagaTTGAAGACTTGGATGCAAACAAACAGAATACTTACGaagatttaaatgatgtaaactGTGATCTAAACTTTATGCAAGATGACAATACAGTCGACAGTTTGTTCTTGGGGGAGAGTGGTTCTGTTGATCCTGAGgcaatttttccatttttaccAGAAGAAgatgttttaataattcaaaaatgtacAGACCCTGATTTAAGTAGGTTGATGCTTTTAAATCGTGCTAAAAAAGTGCACCTTAAAACATTATGTAGTAAATACTACAAGCTACTATTTGAGTGTAAAAGACATTTGAGTATTGAAATGGGAAAATTGGACCACTTAACTCTAATCAATGTAAATTGTTCTTTAAAGACATTTGCTTATCCATATTTTCGTGATGCAGACAAGTATCATCCTCCACCAAATAGTGATactcttaaaaaaattgaaaataaggaagtaaactgtaattatttatcaaaaaaagtttggaGTATTGTTACTCAAAGAAAACTTAAAGCTGTTATTGAGCTACAAATTTTCAACCATCACAAAGAAAAAATTGCAATTGAAATTGCCAGCTGTGATAGAAATAAGGATAAAGAAAAGTTTTCTGAATTAAgcgaacatttaaaaaaacttaccaaGTCTAAAGATCATATGGAATTCCCACCTCCTTGGGGTGACAGCATTATTGATTGGAAAAATATCTCAACTATTTTATACAAAGATGAAGAATATGAAAAAACATGTCGGGCCTTTTGGAATATATATCTGCATCCGGAAATATATAAGGGGCCATTTACGGCTTCAGAAAGTGAAAAAATAGAGGAATTAGCTGAAAAATACAATTACCAAAATTGGGAGGCCATATTACCTGAGTTAGAGCATAATAGAAGTCCATATCTCATTTGTACTCACTATTTTAGTAAGCTTAGAAAAGCCACTTTCCTTGAACCGTTTAGTTTTAAAGAGGATCAATTACTGATTGAATTAGTCGAAAGTGCACGAGTTGGTGGTACTATTCCATGGACAAATATTCAATATCATTTACATCCAAGGACGAAATCACAGATATATTATAGATATAAGCAGTTAACAGAGAGTGATCGTATTACAAAGGGTCAGTTTACACTTAATGAAGATGTATTAATTCAATGCCTTGTAAAGAAATTTGGAGAGAATTGGAGTAAGATATCAAGCGAAATGCCAAATAGAACACGAAGTCAAATAATACAAAggtataaatattatttgaaacCTAATATCAATTTGGAGTTGGGAAATTGGACAATAGAAGAAGATAAACTCATACTTGCTCATGTTAAAGTACATGGAGCTAAAAACtggaaatttctcgaaaaagaTTCAAACAGAGGTGTTGGTCATTTTCGACATAGGTACCAAactattaaaaagtatttaagcAAAAATCCAGATATAAGCTTGGATGATCTACCTCGGCGATCATGGAGATTAGTATCAGGAAGATTAGTAagagaaaaatcaaataaactagctgaaacatacattttaaacaaaactcTACCCCCCATAGAACCCCCTAACTCAGATGTTTGTTTGAATGGAAGACGTCCACGACAATCAGTAGATGAAGATTTGTTGACAATTCCTTCAGatgatgaattaaaaaaatttcctttaGATATGTATGATAtagaaatactaaaaattttacgtcaaaaaaacgttatcacATATAACACAAGTGATCATCGATTTGATATACCCGGACCAAGTTTATTAGAAATTGAATACGATTTACCACCCAATGTAAATACCATTCAAGCATTGCGATGCCTTATATTACAATATCATAGTTTCGTTCCTACTTTACCTATTTCATTGCGTAATTTCGAATCTGATGTTAGACCTGATTTAGGAACATTTGAAAAACGCTTTATTGCAATGTTTAGATGGCCTTCATTAATGTCAATAATTGGTCCTTCTGAAAACTTAATTGAGAAACCTCCTGAAATTACTAAAAAGGTTTATGGCAAACGAGGAAGGCCTGCAAAGAATTTATCGaaggttttaaaaatgaacGCGGCTCGAAGATCCTATccagttattgtaACTCAACCTAGTCACCTAAATATAGATTTACCATCCCATCTTCAACCAGAACCACAAGATTTAATTGTGCGAAATACTATCTTAACAGaagAACTGGAAGAGATTGTAGATGATCCAGAGCCTGTTAATGAAAGTGTAGTCAATGCTAAAATTACCAGTATTAACGATGTTGCACAAACTATTGCAAAATTATCTCCAAAGAAGAATCacaaatatataattaaaataggaGAAAGTACACTGCAAAAATTACTTAAGAGAAAAGTGAATATAAGTGATGATAATACTAGTGAAAATGTAAAACTTGAAAATACACGGATAGAAACTAATGATGATCAAAGACCTggaacttcaaaaataaaaaaagtaaaattttag
Protein Sequence
MLNCWANSDSEDSEDEDDDDDEIEDLDANKQNTYEDLNDVNCDLNFMQDDNTVDSLFLGESGSVDPEAIFPFLPEEDVLIIQKCTDPDLSRLMLLNRAKKVHLKTLCSKYYKLLFECKRHLSIEMGKLDHLTLINVNCSLKTFAYPYFRDADKYHPPPNSDTLKKIENKEVNCNYLSKKVWSIVTQRKLKAVIELQIFNHHKEKIAIEIASCDRNKDKEKFSELSEHLKKLTKSKDHMEFPPPWGDSIIDWKNISTILYKDEEYEKTCRAFWNIYLHPEIYKGPFTASESEKIEELAEKYNYQNWEAILPELEHNRSPYLICTHYFSKLRKATFLEPFSFKEDQLLIELVESARVGGTIPWTNIQYHLHPRTKSQIYYRYKQLTESDRITKGQFTLNEDVLIQCLVKKFGENWSKISSEMPNRTRSQIIQRYKYYLKPNINLELGNWTIEEDKLILAHVKVHGAKNWKFLEKDSNRGVGHFRHRYQTIKKYLSKNPDISLDDLPRRSWRLVSGRLVREKSNKLAETYILNKTLPPIEPPNSDVCLNGRRPRQSVDEDLLTIPSDDELKKFPLDMYDIEILKILRQKNVITYNTSDHRFDIPGPSLLEIEYDLPPNVNTIQALRCLILQYHSFVPTLPISLRNFESDVRPDLGTFEKRFIAMFRWPSLMSIIGPSENLIEKPPEITKKVYGKRGRPAKNLSKVLKMNAARRSYPVIVTQPSHLNIDLPSHLQPEPQDLIVRNTILTEELEEIVDDPEPVNESVVNAKITSINDVAQTIAKLSPKKNHKYIIKIGESTLQKLLKRKVNISDDNTSENVKLENTRIETNDDQRPGTSKIKKVKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-