Sbim018555.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- -
- Assembly
- GCA_963971135.1
- Location
- OZ020182.1:19143997-19144500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-09 1.4e-06 29.2 0.1 5 36 1 32 1 34 0.94
Sequence Information
- Coding Sequence
- ATGAAGGAAGCCCTTCAAGCTGTAAAATCGGGTATGACAGTATATGCTGCCAGTAAACGTTATAATGTTCCAAAAACTACACTTTTATATAAACATACAGGAAAATGCCCGATTTATAGAAAGACGGGTCCTGACTCTATATTATCAAGTGAAGAAGAACAAATCTTAGTTGACTGGCTTTTCCACATTGCAGCTGCAGGATTTCCCTCTACAAAATTGCAGCTAATAGATACTGTagacattttaatcaaaaaattaaaaagaccCTATCCGTTTAATAATGGAAGGCCTGGACGTCATTGGTATGAAGCCTTCTTAAAAAGACATCCAGAGTTGACTGAGAGAGTTAGCCAAAACTTAACTAAAAGTAGAGCATCTGTTACTGAGGAAAATATAAAGAATTGGTTTTTGGAAATAACATCGTATTTAAAAGAGAAAAATCTAATGGATGTTATGCTAGATCCAAGAAGAATATTTAACTGTGATGAATCAGCATTTTTTTAA
- Protein Sequence
- MKEALQAVKSGMTVYAASKRYNVPKTTLLYKHTGKCPIYRKTGPDSILSSEEEQILVDWLFHIAAAGFPSTKLQLIDTVDILIKKLKRPYPFNNGRPGRHWYEAFLKRHPELTERVSQNLTKSRASVTEENIKNWFLEITSYLKEKNLMDVMLDPRRIFNCDESAFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01371041;
- 90% Identity
- iTF_01371041;
- 80% Identity
- iTF_01371041;