Sbim012963.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- -
- Assembly
- GCA_963971135.1
- Location
- OZ020181.1:35382840-35384714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-11 4.5e-08 34.0 0.0 3 39 20 56 18 60 0.93
Sequence Information
- Coding Sequence
- atgccgcGTAAACACATTCACAAACCTGGCACGGCGTTTCGTGTAAACTAttctaaagaaaatttagaatttgCTTTACAATCTGTAGTTGAGGAAGGTTATTCATTCGGACAAGCAGCTGATCGATTTGGAATTCCCAAAGCAACTCTTTGGAGGAAATATCGAGGGCTGTCATCAGACAAGTTGGGAAAACCTCCTGCGCTATCTGTATTGGAggagaaaaaaattgttgatgcACTTACAACAGCTGCAGGATTTGGGTACCCTTTCAACaaacttgaattaaaaaaattaattcaagatTATCTTAACCGAAAAGGTGTATCGGTTAAATGCTTTAAGGATAATTTGCCAGGTGACGATTGGTGCAGAAGCTTTCAAAATCGAAATCCTGAACTAACTTGTCGTAATTGTGAAAACATGAAACGTGTCAAGGCTCAGCTCTCTGAAGAAGTAATATCTAACTATTTTTCAGAATTAGAGGTTACGCTTGTTGATGTACCCGCAGAAAATATTCTTAACTATGATGAAACGAACATATGCGATGACCCAGGACGCATAAAGGTGTTTGTGAAAAAAGGATCAAAACATGCACCACGCATACTTGATTCCTCGAAAACTTCCAATTCTGTCATGTTTTCAGTGCTTGGAGATGGGTCCTTGTTACCACCATACGTTGTTTAtaaagcaaaaaatatttacccgGAATGGATTCAAAATGGACCACCCGGTGCCAGAAGAAAAACTGGTAGAAAAGTTATTATTGGTGATAATTTAAGTAGTCACCtttctataaatattattcaatTATGTGAACAAAATGACATTTCGTTTGTTTTTTTACCAACCAACAGTACACACGTATGCCAACCATTAGACGTTTCCGTTTTTGGTCCACTAAAAAAAAGTTGGAGAAGAATTTTAACTGAATGGAAATGCAAAAATAGAGGTGTAGTTCCCAAGTCAGAATTTCCttcattattaaacaaattactaCAGTCCATGGAATCCACAATATCTCAGAATATTAAATCTGGATTTGAAAGCTCTGGGATAATTCCTCTAAACCCCGACAGAGTGAAAAGTAAACTAATTGGTTATTTACCCAATACAAATGACCGTTTACAAAACAATGCTTTATCAGAaacatttaaacaaattatttgtgAAAAAACTACTTTGAACGAAAACAAGCGACCaataagaagtaaaaaagtcaATATTGCTGCTGGAAAATCCATTGGTTTAATTGATTTAGCAGGTCCCGGACCATCATATAGAAACACAGAGGATTATTCAGATAAGACTCAAAGAGAGAATCTAAATGACCTGTCTGATGACTTTGATGAGactgataaaaataaagaaaatagtgATAATGAAATTGATGATAATGTTGAAGAAGAAACTGATGATTCACAAGAGGAGACTGATGATAATTTAGAGAAACAAACCGAATCTGAAGTCGAATATAACAAAAAACGAGAAAATGAGACTGTAAAGAAACCAGTGACTAGTTTTGATGATTTAAGGAAAAATATGTTTGTTATAGTAGGATTAgtttacaacaaaaattctaaaaaagaatACATCAAAGAATTTTTGGGACAAATTATTTCTCTTGATAAAGGGATTTCCGTTAGTTTCCTAAGAAATTACAGTGGGAAAAAAAACAGGTTCATTTTTCCCGCTGTAATTgacacttcaaaaattaaattccagGATATTAAATACATAGTTTCTGAACCGATAGTGTGCAGAGGAATTTATACGTTCGGTGGTGATCTTttgtga
- Protein Sequence
- MPRKHIHKPGTAFRVNYSKENLEFALQSVVEEGYSFGQAADRFGIPKATLWRKYRGLSSDKLGKPPALSVLEEKKIVDALTTAAGFGYPFNKLELKKLIQDYLNRKGVSVKCFKDNLPGDDWCRSFQNRNPELTCRNCENMKRVKAQLSEEVISNYFSELEVTLVDVPAENILNYDETNICDDPGRIKVFVKKGSKHAPRILDSSKTSNSVMFSVLGDGSLLPPYVVYKAKNIYPEWIQNGPPGARRKTGRKVIIGDNLSSHLSINIIQLCEQNDISFVFLPTNSTHVCQPLDVSVFGPLKKSWRRILTEWKCKNRGVVPKSEFPSLLNKLLQSMESTISQNIKSGFESSGIIPLNPDRVKSKLIGYLPNTNDRLQNNALSETFKQIICEKTTLNENKRPIRSKKVNIAAGKSIGLIDLAGPGPSYRNTEDYSDKTQRENLNDLSDDFDETDKNKENSDNEIDDNVEEETDDSQEETDDNLEKQTESEVEYNKKRENETVKKPVTSFDDLRKNMFVIVGLVYNKNSKKEYIKEFLGQIISLDKGISVSFLRNYSGKKNRFIFPAVIDTSKIKFQDIKYIVSEPIVCRGIYTFGGDLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01371042; iTF_01371045; iTF_01371044; iTF_01371046;
- 90% Identity
- iTF_01371042; iTF_01371045; iTF_01371044; iTF_01371046;
- 80% Identity
- iTF_01371042;