Sbim035045.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- bab2
- Assembly
- GCA_963971135.1
- Location
- OZ020185.1:1283898-1296583[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-12 3.8e-09 37.4 0.0 1 39 364 403 364 407 0.90 2 4 1.1e-12 9.3e-10 39.4 0.1 1 39 418 456 418 459 0.95 3 4 9.9e-19 8.7e-16 58.7 0.0 1 45 473 518 473 518 0.98 4 4 5.1e-16 4.5e-13 50.0 0.0 1 39 525 564 525 569 0.92
Sequence Information
- Coding Sequence
- aTGTCTGGTCAACATTACTGCCTAAGATGGAACAACTACCAGACAAATATGACCTCAGTATTCCATCAGCTACTACAAAACGAAGCTTTCGTGGATGTTACCTTAGCTTGTAACGATTTGTCATTAAAAGCTCATaaaGTTGTGTTATCGGCTTGTTCTTCATACTTTCAAAAGCTGCTCCTAGAAAATCCATGCAAGCATCCCACGATAATAATGCCTCAAGATGTGTGCTACGCCGATCTAAAATTTATCATTGAATTCGTTTACAAAGGTGAAATCGACGTTTCACATACAGAACTCCAGTCACTTCTAAGAACAGCagatcaattaaaaattaaaggtctCTGCGAACCTCCAGATGAAAGAGAGGGTGGTGGTTCAGCCCTCCCCGCTCGTGAGTACACTAAAGTACGAAGAACAGAGTCGCCAAAACCCACACTAGACAACAACAACCGGAAGCACAAGTACCGGAAGCCGGAAAAAATTGTTACGAACCAGGAACAAGGAGACTTGGAAGTGCACACCTCTGACGAAGAAAATGAACTTGCCTTAACTCCCACGAATGAGGAGAGGAGACGAAAACAAGCCACCCCAGTACAAAACAAACCACTTAACATGAGCAGCAATGCCCTTTTAACCGGACAGATGCTCTTCTCGCAGTTTGGTGTTGAGAATGAAGATTTTCCTCCGGAGCCTTTGGCACCTGCCGCGACACCAGTGGGTCACGTGGACATGCGTGACCATTCACCATCGCGTACCTTACTAACCAACTCATCCATCCACAGAACGGATCTTtcagATTCGCATATAAAATACGgagatattaaaaaagaaatcgatattaaatttgaaacgtTGCGATCTTACGATCAAGATTCCCTCTTAGATATTGATAGTTCCCACATGAGTGGACCCGAGCATTCTATGGATAGTCACGAAGATCTTGATCAAGGCATGCAACACACGATGATGGTCACTCCTGAACTAATGGGGATGATGCCTACACCTTCACATAGAATGGATGGTATTAAAACTAATGGACATTCCGATCATCAACCTGGCCGACATACTGGAGGTCCTAAAACGTGGACGCAAGAAGATATGGAGTTGGCTTTGGAAGCTCTTAGGAACCACAACATGAGTCTTACtaagGCTTCAGCAACTTATGGAATTCCTTCAACAACGCTTTGGCAACGCGCGCATAGGTTAGGAATAGATACTCCAAAAAAAGAAGGTCCTACAAAGTCTTGGacggaagaaaatttaaattccgCGTTAGAGGCTTTAAGGACAGGCACGATATCCGCGAATAAAGCGAGTAAAGCATACGGAATTCCTAGTAGTACTTTGTATAAAATCGCAAGACGTGAAGGTATTAGATTGGCTGCACCTTTCAACGCAGCTCCAACAACATGGACGCCTGAAGATTTGGAAAAAGCTTTGGAGTCGATAAGATCGGGACAAACGTCTGTACAAAGAGCATCAACTGAGTATGGAATACCTACAGGGACTTTGTATGGGAGATGCAAACGTGAAGGAATTGAGCTATCGCGTTCGAATCCCACACCTTGGTCTGAAGATGCCATGGGAGAAGCTTTGGAAGCGGTTAGACTTGGGCATATGTCGATAAATCAAGCAGCAATACATTATAACCTGCCATATTCCTCCTTGTATGGAAGATTCAAACGTGGTGTAAAGTATGAATCAGAACCTTTGGAGGCGAATGCGGATAGTCAATCGCATTTGGATAACCAAGCCATGATGATGGAGTACTCGAATTCGCACCCGGTGCATTACCAGAATCAACCGAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSHTELQSLLRTADQLKIKGLCEPPDEREGGGSALPAREYTKVRRTESPKPTLDNNNRKHKYRKPEKIVTNQEQGDLEVHTSDEENELALTPTNEERRRKQATPVQNKPLNMSSNALLTGQMLFSQFGVENEDFPPEPLAPAATPVGHVDMRDHSPSRTLLTNSSIHRTDLSDSHIKYGDIKKEIDIKFETLRSYDQDSLLDIDSSHMSGPEHSMDSHEDLDQGMQHTMMVTPELMGMMPTPSHRMDGIKTNGHSDHQPGRHTGGPKTWTQEDMELALEALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGVKYESEPLEANADSQSHLDNQAMMMEYSNSHPVHYQNQPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00920766;
- 90% Identity
- iTF_01371453;
- 80% Identity
- iTF_01371453;