Smel009928.1
Basic Information
- Insect
- Stenurella melanura
- Gene Symbol
- nfxl1
- Assembly
- GCA_963583905.1
- Location
- OY757309.1:148757939-148766370[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.9e-10 8.7e-06 27.9 10.1 1 19 236 254 236 254 0.98 2 7 0.9 2.7e+04 -2.4 1.0 5 10 278 283 278 283 0.86 3 7 3.3e-07 0.01 18.1 12.9 1 18 289 306 289 307 0.97 4 7 0.19 5.7e+03 -0.3 0.6 1 5 316 320 316 325 0.89 5 7 0.0001 3.1 10.2 15.3 1 18 341 358 341 359 0.94 6 7 1.2e-10 3.7e-06 29.1 10.0 1 18 368 385 368 386 0.98 7 7 0.66 2e+04 -2.0 0.9 5 10 414 419 414 419 0.93
Sequence Information
- Coding Sequence
- ATGACTGATGAGAGTTTAGAATCCCTATCTCTAAGGTGTGATGACACACTATCAAAGGCTAAAGAATGGTTCACACCTAATGCCCTTGCACTAAACGAgacaaaaactgtaaaaatggtcACAAGTACACGTGTTATAAATATGCCAGACAATCCTGCCAGCTATAAATTTCTGGGAGTTTCTATTGATCCTTCCCTAAAGTGGGACAGTCATACAAACTATCTGGCAGACCagattactaaaaatatttactgtCTTAGACAATTGTCCAACTCAGTTTCACCAGATACTTTAAAAACCGCTTACTTTGCTTTAATTCACTCCCGTATATCGTATGCTATCCCCGTCTGGGGGCACTCAGCTGGTACGAATAGAATATTTCGTTTACAGAGGAGGGCAATCAGAATAGTTGGTGGATTAAGATATCGAGacgagacaaaaaatatttttataacacttAAAATACCTACGGTACCTAGCATATACGCACTGCAATGTATAACATATGTACATGATAATCTGAAGAAATTTCATTCTCACACAAACGTGCATGAACATGAAACTAGATATAGAGAAAACATTTGCACAGAATTTACACGACTCACCAGAGGACAAACTGGCACTAGATTTCTTGGCATAAAAATATACAACTTATTACCCAAAAGTGTTAGGGCACTGCCACCGGTTTGTAATAAACCACTGGAGTGTGGCAATCATAGATGTCAAGATGTATGTCATGCAGGAGTATGCGACAGTTGCTCATTAAACAAACCCAGAACATGTCCTTGTGGTAAAACGACTTATCAGTTGCCTTGTACAGAAGACACACCTACATGCCCGGATACATGTGACAAACTCCTTGAGTGTGGTGTTCATACTTGCAATCAGAGATGCCATAAGGATAAATGTGGACCGTGTCTAGAAACTGTGGAAAAAGCTTGTAGATGTGGTCAACATTCTAAAGAAGTTCAGTGCTACAAACCATACTTTTGTGAAACGAAGTGTAAGAACATGAAGGATTGTAACAAACACCCTTGCAATAGAAAGtgctGTGATGGTAATTGTGCACCATGTGAAAAACCATGTGGCCGAACTTTGCGTTGCGGAAATCATAAGTGCATTTCAATATGCCATAGTGGACCTTGTTTTCCTTGTGTGTACAATGACATTGTGTCCTGTAGATGTGGATTAACTAACACAAGAGTGCCTTGTGGAAGCAAACATAAGACTAAACCTCCTAAATGTAGTAAAATTTGTTCGTAA
- Protein Sequence
- MTDESLESLSLRCDDTLSKAKEWFTPNALALNETKTVKMVTSTRVINMPDNPASYKFLGVSIDPSLKWDSHTNYLADQITKNIYCLRQLSNSVSPDTLKTAYFALIHSRISYAIPVWGHSAGTNRIFRLQRRAIRIVGGLRYRDETKNIFITLKIPTVPSIYALQCITYVHDNLKKFHSHTNVHEHETRYRENICTEFTRLTRGQTGTRFLGIKIYNLLPKSVRALPPVCNKPLECGNHRCQDVCHAGVCDSCSLNKPRTCPCGKTTYQLPCTEDTPTCPDTCDKLLECGVHTCNQRCHKDKCGPCLETVEKACRCGQHSKEVQCYKPYFCETKCKNMKDCNKHPCNRKCCDGNCAPCEKPCGRTLRCGNHKCISICHSGPCFPCVYNDIVSCRCGLTNTRVPCGSKHKTKPPKCSKICS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -