Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757315.1:97663880-97684592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.38 55 6.7 2.2 1 23 322 344 322 344 0.94

2 13 0.22 31 7.5 1.0 1 23 351 373 351 373 0.97

3 13 0.32 45 7.0 2.0 1 21 382 402 382 403 0.95

4 13 0.066 9.3 9.2 2.0 1 23 505 527 505 527 0.99

5 13 0.22 31 7.5 1.0 1 23 534 556 534 556 0.97

6 13 0.3 43 7.1 1.4 1 21 565 585 565 586 0.96

7 13 3 4.3e+02 3.9 2.8 1 23 1731 1753 1731 1753 0.94

8 13 0.34 49 6.9 1.0 1 23 1760 1782 1760 1782 0.97

9 13 0.54 77 6.3 1.8 1 21 1791 1811 1791 1812 0.95

10 13 0.19 27 7.7 2.4 1 23 1876 1899 1876 1899 0.91

11 13 0.037 5.3 9.9 2.3 1 23 1917 1939 1917 1939 0.98

12 13 0.027 3.8 10.4 3.2 1 23 1946 1968 1946 1968 0.98

13 13 0.052 7.4 9.5 4.2 1 23 1982 2004 1982 2004 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.38	55	6.7	2.2	1	23	322	344	322	344	0.94
2	13	0.22	31	7.5	1.0	1	23	351	373	351	373	0.97
3	13	0.32	45	7.0	2.0	1	21	382	402	382	403	0.95
4	13	0.066	9.3	9.2	2.0	1	23	505	527	505	527	0.99
5	13	0.22	31	7.5	1.0	1	23	534	556	534	556	0.97
6	13	0.3	43	7.1	1.4	1	21	565	585	565	586	0.96
7	13	3	4.3e+02	3.9	2.8	1	23	1731	1753	1731	1753	0.94
8	13	0.34	49	6.9	1.0	1	23	1760	1782	1760	1782	0.97
9	13	0.54	77	6.3	1.8	1	21	1791	1811	1791	1812	0.95
10	13	0.19	27	7.7	2.4	1	23	1876	1899	1876	1899	0.91
11	13	0.037	5.3	9.9	2.3	1	23	1917	1939	1917	1939	0.98
12	13	0.027	3.8	10.4	3.2	1	23	1946	1968	1946	1968	0.98
13	13	0.052	7.4	9.5	4.2	1	23	1982	2004	1982	2004	0.98

Sequence Information

Coding Sequence: ATGGGCGCGCCATATCATCCAGCCACAAATGGACAGGCAGAAAGCGCGGTGAAAATCATGAAAAGGGCAATATTAAAAAGTACTGATGAGGGCGTTAAAGATGTAAATCTAATAATAAACCGTTTTCTATTACAATATCGAAATACTCCTCACACTACCACATGTGAGGCACCTGCGAAGCTGTTGATGGGTAGGTTTTTGCGTTCAAAATTAGACCTGCTGTTACCTTCAACTGAGGGTGTAGTAAAATCGAAACAAAACtatcaacaaaattattacaGGCGTAAACATGATATAACATTTGTAAAAAATGATAATGTCTGGGTACGcgattttagaacaaataatccGAAATGGCGCGAAGGCAAGATTGATAGTGTTATTGGCCAAAGAACCTATGTTGTTGATGTAGGTGGTGGAATAAAATGGAAGCGGCATAAAAATCAACTAAAGCCAAATAAGAATCAAAGGGGTGAACCTAAGAATCCTCTATCCATAATTCCACGACAAAATTCAGAAAATGTAAATGATAATTCAGAAAATAATAATTCTGTACTGATACCAATCGAAACGGAAATacctattcaaaataatttacctGATGTAACCAATGATAGCATAGATATTACCCAACCTGGAACTTCTACAGATAGTAATAAGGAAGATCGAGTACTTCGAAGAAGAAGTAAATTAAAGGCTCCTAGTAGGTTTCAAGTAATCTCAGAAGTCAAGGTGGCTTTTCCACAACTAGAATTCGGTGTTACATTATCTACAAGTGGAACCATTTCAGTGCTGCAGTCTCAGGAACCTCATTTTGAACgaccaaaaagaaataaaaactccCAAGAAAGCTCTTCTGTGACAACAAACCACAACTCCGGAAAATGTTCGGATAAGGTCGGAGATAAGACAAACgccaaaaaacgaaaaattgcCAATGAAGACATCATAGAGACAGTCACATACAGATGTCAATCTTGTACATTTACAACAGAACATGAAGATAGCCTTACGCAGCATATGCCTACACACACCAAGAAAATAGTTCGGTATAGGTGTGAATCTTGTCCATTTGAAACAAAGTACACAGACTCTTTTAAAAGACATGCGCTAGTTCATGAAGATCCTTCAAAAGTCACAATGTATCCATGCAAGCATTGTTCGTATAGAAGTAAATATAAGGCGGGCACTATGAGACATATGAAAAGCTGTAAACGTAGGAAAAAACGTAATAAGGTCATTAAGAAGCACCCTGCAAAAAAAATCAGcTCAGAAGTCAAGGTGGCTTTTCCACAACTAGAATTCGGTGTTCCATTATCTACTAGTGGAACCATTTCAGTGCTTCAGTCTCAGGAACCTTATTTTGAACGactgaaaagaaagaaaaactccCAAGAAAACTCTTCTGTGACAACAAACCACAACTCCGAAATATGTTTGGATAAGGTTGAAGATAAGACAAACGCCAAAAAACGTAAAACTGCCAATGAAGAAATCATAGAGACAGTCAAGTACAGATGTCAATCTTGTACATTTATAACAGAACATGAAGATAGCCTTATGCAGCATATGCTTACACACACCAAGAAAATAGTTCGGTATAGGTGTGAATCTTGTCCATTTGAAACAAAGTACACAGACTCTTTTAAAAGACATGCGCTAGTTCATGAAGATCCTTCAAAAGTCACAATGTATCCATGCAAGCATTGTTCGTATAGAAGTAAATATAAGGCGGGCACTATGAGACATATGAAAGGCTGTAAATGTAGGAACAAACGTAATAAGGTCATTAAGAAGCACCCTGCAAAAAAAATCAGTAATAAGTTAGAAGTAGTAAACCGCGGAAACGAACCGACTTTCGTCACAACAACAAGACGAGAAGTTCTCGACATCACAATTACCACACAACGCGCGGGACGAGTGGTAAGTGAATGGCACGTGTCCCAAGAACCATCGCTATCGGATCACAGGTACGTAAGATTCAAAACAGAAACCCCACCGGAAGAAGGGAGGATGAGCAGAAACCCAAGAACCTGTGACTGGGAACTCTTCAAGGAGAACCTAGAACAGGGGCTGAAGGACTGCCCATCAAGACCACAAACACCGGCGGAAGTGGAACTACTGAGCGATCTAATAACCTCAGCAGTAATAACAGCCTTCGAGACAAGCTGTCCTCTGAAAGAGAGAGGGGCCAAACGTGAAACCACATGGTGGAACCGCGGGCTCTCCTCCAGGAGGGCAGAGGTTCGAAGGTTGTTTAATCAAGCCAAAAGGACTGGCAGATGGGACGAATACAAAGCGACCCGTCTAAAATACGTCTACGCCATAAGAGAAGCCAAAACCAAATCATGGAGAAAGCAATGCGAGGAGATAGAAAATACTCCAGAAGCTGCTAGACTCCAAAAAATCTTACAGAGAGACAACCAGGTAAAGATTGGATCTCTGCAAAGACAACAAGGGGAGTATACAAATACCGAGAAGGAGACTCTAGAACTACTACTGGAGACACACTTCCCAGGTAGCGTAACCACTCCACAAGACAGAAGCGGTCCACACGAAGATATACCAATAAGAAGGGCATCAAAGGAGGACTGGAAAACTTCAAATAGcataataaacaaaacaagaCTTGCATGGGCAATCAACTCATTTGAACCATACAAGTCACCAGGGCTGGATGGAATATTTCCAGCCCTACTTCAACAGGGAATGGACATACTTGCAACACCCCTGTGCACACTATTCAGGGCCAGTTTGGCCCTGGGTTATGTGCCAACTGAATGGCGGAAGGTAAaggtggtatttataccaaaaCCAGGGCGTGACACTTATGCCCAGGCCAAATCCTTCCGACCCATCAGCTTAACATCATTTCTCCTGAAAACCCTGGAGAAACTGGTTGACAGGCACATCAGGGACGATAGAATGAGCATAAAACCTCTACATCGAAACCAGTATGCCTACCAAACAGGAAAATCTTGTGAGCTCGCAATACACGAGCTTACGCAAAAAATAGAAAGGGCCCTGGACAGTAAAGAAACTGCCATAGGAACCTTCCTAGACATCGAGGGTGCCTTCGACAATACCTCATTCGACTCGTTAAACGAGGCAGTGAAGAGGCGCGGAGTTGAAAAGTCAATTACAAGATGGATCGACTCAACACTCAGAACTAGAAAAATTCAGTCCACGCTAGGATCCACAACAGAGGAGGTGTCTGTGACCAGAGGATGCCCGCAGGGGGGAGTCCTATCTCCTCTCCTGTGGTGCTTGGTTGCAGATGAGCTTCTATCTCGACTGGAACGGCGAGGAATATATGCGCAAGGCTATGCAGACGATATCGCCATCCTGGTAACAGGAAAACACGAGGGCCCTGCATCGGCAAAGATGCAGCGAGCCCTTGTCACGGTAGAAGAATGGTGCACACAAGAAGGTCTTTCTGTGAATCCGGGGAAGACCACTGTGGTCACCTTCACAAGAAAGAGAAAACTCAACCTGGATAGTCTATATCTCAGAGGAAAAGAATTACAGGTGAGCACGGAAGTCAAATATCTGGGACTGACTTTAGACACCAAATTAAACTTCAATGCACATCTAGATAGAGTGACTACCAAAGCTACGCGGGCCTTATGGGCTAGCAGAAGAATGGTAGGTAAAAACTGGGGACTACAACCAAGAATGGCACACTGGCTGTACCAAATGGTTGTAATACCAATAATTACCTACGCCTCCCTGATCTGGTGGCATAAAGCCGGAAAAGGGGAGGCAATGAGAAAACTAAGAAAAGTACAAAGACTAGCATGTCTAGGCATAACGGGAGCAATGTCAACAACGCCTACCGCAGCCATGGAAGCACTACTTTGCCTGCCTCCACTACACCTAGTCGTGGAGAGCGAGGCAATGTTAGCGGCGTACAGGCTGAAAACAAACGGACATGGGACCATTCCAAGAAAGGGGCACcatacagaaatatttcaacaaataaggaAAAATCGCATACTAGATATGCAGTCGGATAGAATCAGCACAAGCCACAACTTCACAAAGACCTTCAGGGTATACATACCCAATAGGGAAGAGGAAGGAACAAGGCAAATGCGAAGACACTCAAATGATACCATATGGTATACTGACGGATCAAAGACGTCAAGTAGTACTGGAGCAGGCGTTGCGGGGGATCAACCAGGGATAGATATCAGTCTAAACCTAGGCAGTACCGCAACGGTGTTTCAAGCAGAAGTCACAGCTATACAAATCTGTGCACAAGAAATGATGCAGAGGTCATACACAGATAAGAGAATCCGCATCATCACTGACAGTCAAGCAGCTCTCAAAGCTCTGAATGCAGTAGAGGTACGTTCTAAAACGGTAAAAGACTGCCTCGAATCCCTGGCGAAACTGGCGGAACACAACAGCATACAACTGGAGTGGACGCGAGGACACCAGGGAAACGAGGGCAACGAAAAAGCAGACAAGCTGGCCAAAGAAGGTGCCAAAGCAGCCTTGATAGGTCCCGAGCCATCTTGCGGGATATCATACAATACCGCAAGAAGAATGGTAAAGGAACTATTGAGACAGAAACACAACTTGTACTGGACTGAGACGCCGGGGATGAGACAGTCACGTATGCTCATCATTGGCGGACCTTCCAAGACAAAGACTAACGAACTGCTGAAGCTGAGCAGAAAACAGCTGAGATGTGCAGTAGGCATCCTGACAGGACACTGCACACTGAACAAACACCTAACCAATATAGGTGTGAAAGACAATCCATATTGCAGGATGTGTGAAGAGGAGGAAGAAACTCCCTACCACATACTCTGTGATTGCCCGGCCTTGGTGGCTGGAAGGTTCTCACACTTCGGGGGGCCAACCGTGACCCCGGAAGAAATAGCCAGATTTCCCATTGATCGCACACTCTCCTTCTGGAGAGGAACGGGATTAATGGGctCAGAAATCAAGGTGGCTTTTCCACAACCAGAAGGTGGTGTTACATTATCTACTGGTGGAACCATTTCAATGCTGCAGTCTCAGGAACCTCATTTTGAACGaccaaaaagaaagaaaaactccCAAGAAAGCTCTTCTGTGACAACAAACCACAACTCCGAAAAATGCTCGGATAAGGTCGAAGATAAGACAAACGCCAAAGAACTTAAAACTGCCAATGAAGACATCATAGGGACAGTCACGTACAAATGTCAATCTTGTACGTTTAAAACAGAACATGACGATAGCCTTACGCAGCATATGCCTACACACACCAAGAAAATAGTTCGGTATAGGTGTGAATCTTGTCCATTTGAAACAAAGTACACAGAATCTTTTAAAAGACATGCGCTAGTTCATGAAGATCCTTCAGAAGTCACAATGTATCCATGCAAGCATTGTTCGTATAGAAGTAAATATGAGGCGGGCACTAAGAGACATATGAAAAGCTGTAAACGTAGGAAAAAACGTGATAAGGTCATTAAGAAGCACCCTGCAAGAGAAATCAGGTATGCCGGTCAATCGCATTTATCTCAGACCAAAAGTAGACGAGGACCTAAAAGACGGGCCATATTAAAGGACGGGCCGAATCTGAAAAAGTCAAAAGATAAGTGGATAAATCCTTCAGGAATTAAATTGTATAAGTGTAACTCCTGTTCTTTCCAATCAAAATATAAAGCGAACTTGCAAAGGCACGAATTATTTCTTCATATACTGGAGGATGCAGAGACTCAGGATACAAACCTTTCAGGGATTAAATGGTATAAGTGTAACTCCTGTTCTTACCAATCAAGATATAGACAGAACTTGCAAAGGCATGAGTTAGTACATTGTACTCCGAAGGATTTGTATAAGTGTAACTTCTgttttttcaaatcaaaatataaaGAGAACTTGCAAAGGCATGCGTTAATACATTGTATGCCGAAGGATGCAAACTTTTCGAAAATTAAATTGTATAAGTGTAACTCCTGTTCTTTCCGATCAAGATACAAAAAGAACTTGCGAAGGCATGAGTTATCACATCAGACATCGGAGGATGCAGACTCAGGATGCACACCCTTCGTGAACTAA
Protein Sequence: MGAPYHPATNGQAESAVKIMKRAILKSTDEGVKDVNLIINRFLLQYRNTPHTTTCEAPAKLLMGRFLRSKLDLLLPSTEGVVKSKQNYQQNYYRRKHDITFVKNDNVWVRDFRTNNPKWREGKIDSVIGQRTYVVDVGGGIKWKRHKNQLKPNKNQRGEPKNPLSIIPRQNSENVNDNSENNNSVLIPIETEIPIQNNLPDVTNDSIDITQPGTSTDSNKEDRVLRRRSKLKAPSRFQVISEVKVAFPQLEFGVTLSTSGTISVLQSQEPHFERPKRNKNSQESSSVTTNHNSGKCSDKVGDKTNAKKRKIANEDIIETVTYRCQSCTFTTEHEDSLTQHMPTHTKKIVRYRCESCPFETKYTDSFKRHALVHEDPSKVTMYPCKHCSYRSKYKAGTMRHMKSCKRRKKRNKVIKKHPAKKISSEVKVAFPQLEFGVPLSTSGTISVLQSQEPYFERLKRKKNSQENSSVTTNHNSEICLDKVEDKTNAKKRKTANEEIIETVKYRCQSCTFITEHEDSLMQHMLTHTKKIVRYRCESCPFETKYTDSFKRHALVHEDPSKVTMYPCKHCSYRSKYKAGTMRHMKGCKCRNKRNKVIKKHPAKKISNKLEVVNRGNEPTFVTTTRREVLDITITTQRAGRVVSEWHVSQEPSLSDHRYVRFKTETPPEEGRMSRNPRTCDWELFKENLEQGLKDCPSRPQTPAEVELLSDLITSAVITAFETSCPLKERGAKRETTWWNRGLSSRRAEVRRLFNQAKRTGRWDEYKATRLKYVYAIREAKTKSWRKQCEEIENTPEAARLQKILQRDNQVKIGSLQRQQGEYTNTEKETLELLLETHFPGSVTTPQDRSGPHEDIPIRRASKEDWKTSNSIINKTRLAWAINSFEPYKSPGLDGIFPALLQQGMDILATPLCTLFRASLALGYVPTEWRKVKVVFIPKPGRDTYAQAKSFRPISLTSFLLKTLEKLVDRHIRDDRMSIKPLHRNQYAYQTGKSCELAIHELTQKIERALDSKETAIGTFLDIEGAFDNTSFDSLNEAVKRRGVEKSITRWIDSTLRTRKIQSTLGSTTEEVSVTRGCPQGGVLSPLLWCLVADELLSRLERRGIYAQGYADDIAILVTGKHEGPASAKMQRALVTVEEWCTQEGLSVNPGKTTVVTFTRKRKLNLDSLYLRGKELQVSTEVKYLGLTLDTKLNFNAHLDRVTTKATRALWASRRMVGKNWGLQPRMAHWLYQMVVIPIITYASLIWWHKAGKGEAMRKLRKVQRLACLGITGAMSTTPTAAMEALLCLPPLHLVVESEAMLAAYRLKTNGHGTIPRKGHHTEIFQQIRKNRILDMQSDRISTSHNFTKTFRVYIPNREEEGTRQMRRHSNDTIWYTDGSKTSSSTGAGVAGDQPGIDISLNLGSTATVFQAEVTAIQICAQEMMQRSYTDKRIRIITDSQAALKALNAVEVRSKTVKDCLESLAKLAEHNSIQLEWTRGHQGNEGNEKADKLAKEGAKAALIGPEPSCGISYNTARRMVKELLRQKHNLYWTETPGMRQSRMLIIGGPSKTKTNELLKLSRKQLRCAVGILTGHCTLNKHLTNIGVKDNPYCRMCEEEEETPYHILCDCPALVAGRFSHFGGPTVTPEEIARFPIDRTLSFWRGTGLMGSEIKVAFPQPEGGVTLSTGGTISMLQSQEPHFERPKRKKNSQESSSVTTNHNSEKCSDKVEDKTNAKELKTANEDIIGTVTYKCQSCTFKTEHDDSLTQHMPTHTKKIVRYRCESCPFETKYTESFKRHALVHEDPSEVTMYPCKHCSYRSKYEAGTKRHMKSCKRRKKRDKVIKKHPAREIRYAGQSHLSQTKSRRGPKRRAILKDGPNLKKSKDKWINPSGIKLYKCNSCSFQSKYKANLQRHELFLHILEDAETQDTNLSGIKWYKCNSCSYQSRYRQNLQRHELVHCTPKDLYKCNFCFFKSKYKENLQRHALIHCMPKDANFSKIKLYKCNSCSFRSRYKKNLRRHELSHQTSEDADSGCTPFVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -