Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757315.1:102471347-102517306[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.045 6.3 9.7 1.0 2 20 444 462 443 465 0.92

2 21 2.7 3.8e+02 4.1 3.5 2 23 475 496 474 496 0.96

3 21 0.048 6.8 9.6 1.9 2 23 506 527 505 527 0.96

4 21 0.17 24 7.9 1.2 2 20 537 555 536 558 0.92

5 21 0.27 39 7.2 2.3 2 23 568 589 567 589 0.96

6 21 0.13 18 8.3 2.1 2 23 599 620 598 620 0.96

7 21 0.0058 0.82 12.5 0.9 2 23 629 650 628 650 0.97

8 21 0.00095 0.13 14.9 1.9 1 23 659 681 659 681 0.98

9 21 1.2 1.7e+02 5.2 3.7 2 23 691 712 690 712 0.96

10 21 0.16 23 7.9 2.0 2 23 719 740 718 740 0.96

11 21 0.0021 0.3 13.9 2.1 2 23 750 771 749 771 0.97

12 21 7.2 1e+03 2.7 3.3 12 23 1102 1113 1098 1113 0.92

13 21 0.09 13 8.7 1.4 2 23 1154 1175 1153 1175 0.96

14 21 0.22 31 7.5 3.5 1 23 1184 1206 1184 1206 0.99

15 21 3.6 5.2e+02 3.7 2.1 2 23 1216 1237 1215 1237 0.88

16 21 0.014 2 11.3 1.4 2 23 1247 1268 1246 1268 0.97

17 21 2.4 3.4e+02 4.2 4.1 2 23 1278 1299 1277 1299 0.96

18 21 0.36 52 6.8 1.6 2 23 1309 1330 1308 1330 0.95

19 21 0.034 4.8 10.1 2.9 2 23 1340 1361 1339 1361 0.97

20 21 0.065 9.2 9.2 3.8 1 23 1370 1392 1370 1392 0.98

21 21 0.07 10 9.1 3.8 1 23 1401 1423 1401 1423 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.045	6.3	9.7	1.0	2	20	444	462	443	465	0.92
2	21	2.7	3.8e+02	4.1	3.5	2	23	475	496	474	496	0.96
3	21	0.048	6.8	9.6	1.9	2	23	506	527	505	527	0.96
4	21	0.17	24	7.9	1.2	2	20	537	555	536	558	0.92
5	21	0.27	39	7.2	2.3	2	23	568	589	567	589	0.96
6	21	0.13	18	8.3	2.1	2	23	599	620	598	620	0.96
7	21	0.0058	0.82	12.5	0.9	2	23	629	650	628	650	0.97
8	21	0.00095	0.13	14.9	1.9	1	23	659	681	659	681	0.98
9	21	1.2	1.7e+02	5.2	3.7	2	23	691	712	690	712	0.96
10	21	0.16	23	7.9	2.0	2	23	719	740	718	740	0.96
11	21	0.0021	0.3	13.9	2.1	2	23	750	771	749	771	0.97
12	21	7.2	1e+03	2.7	3.3	12	23	1102	1113	1098	1113	0.92
13	21	0.09	13	8.7	1.4	2	23	1154	1175	1153	1175	0.96
14	21	0.22	31	7.5	3.5	1	23	1184	1206	1184	1206	0.99
15	21	3.6	5.2e+02	3.7	2.1	2	23	1216	1237	1215	1237	0.88
16	21	0.014	2	11.3	1.4	2	23	1247	1268	1246	1268	0.97
17	21	2.4	3.4e+02	4.2	4.1	2	23	1278	1299	1277	1299	0.96
18	21	0.36	52	6.8	1.6	2	23	1309	1330	1308	1330	0.95
19	21	0.034	4.8	10.1	2.9	2	23	1340	1361	1339	1361	0.97
20	21	0.065	9.2	9.2	3.8	1	23	1370	1392	1370	1392	0.98
21	21	0.07	10	9.1	3.8	1	23	1401	1423	1401	1423	0.98

Sequence Information

Coding Sequence: ATGTGCGGAGTATTAATACGAGAAAGAGATGCTACTCAGCTTGTATTAGAAAACTCCGTCAGTAACGTGATGATAGGTGATTATGGAGGATTCATAGCGAAGGTAATAGGAGAAACTGACGTCTTTCTCAAGGTGAACCGAGCAGAAGGTGCTGTGAAAGCTTTAATCTTACCAAGTTCTGCTCAAGAAGTACCCGTCGTGATAAGGCAGATCTTCCTAAATCGACCTGAGGTTCTTACGATAGTCTTCGGGGAAACAGTGAGGTTGCTGTCTGCTGATGATGATGTAAACACCATGTTAAATTTGCCACCAAATAAAATCCCTCTGTGGGTAAAGGAGAACGCCGTCATTCCACCAAAGACGGTTGCATTGGTTGTCGTGACATGGCGCAGCGTTACCGATAAAGATGTCTACATACTGGGAAATGAGTACTATGTAGATGAATGTATTACGAAAGGTGGACGGAAATTTGGATATATGGATATATCTAAGGAAGTTGTGGCATGTTTTGAATGCACCAATAATCTTGAAGTGTTCTTTAAATTCAGATCGGCTCATGATTTTAGGAGGGGGCAGTCATTGTCGGCTAATGACAAAGTCGATATCAATTTGGATCCGGAAAAGATTgagattataaataatttaatattgacAGAATCCAAAAATGCAGAAAAATGCTGGTTTTGTTCAAAAACTAATGAAATAGAATTCCTTACATCATTGAACGAATCAAAGGAACATACTTTTTTGGTGGATATGCTAAAGGAACATATTCCTATATTAAATTTAAATATTACAGAAGAACTTTTAACATGTGAGACCTGTCTCAATGAGTTGCaaggtattttaaattttataatgaaGTATTTGGATGTGGAACAGAAAATAAGTGAATATACACAAATTAAAGGAATAGATGAAGAAGGTGAAATAGACTTAAAGGATGTACAACAATTTACATTCGAACAGACGGTAAAATTTGAGAGGGAACCCATGGATTTAAATGAATTAAAAGAGACATATGACCAGTTTCAAGAAGGATGTGCCATGCAGCCTGAAGCTGGAATAAAATGTGAGGAGGAAGTAGATAATTCAgagttatttattaaaacagaagATGTTGATGTTAAATTAGAACACAGTGATTACGATAGgACTGTAAATGATATCATCTTACCACAACCAGAAGTCAAGAGgaggttaaaaagaaaaaagaaatgtttaatgCCAAAACTTGAGCAGGATCTGTCAGAACCATCCATTAAGCGTGCATTAAAGAATAAAAGTGATGTTCATATTtataaggatccttcagaagtagAAATtctcaaatgtgactcttgttcttaTCAGACTGTAGATAAAAGTAACCTCAGAAAACATTTGTGGAGGCATAAAGTTGCTTTAGTAGTAACAATGCTCAAATGTGACGATTGTTCCTTTCAAACGAAATATAAAAACAGGTTCACAAATCATACGCTGAggcataaggatccttcagaagtagCAATGCTCAAATGTGGCGATTGTTCCTTTCAAACGAAATATAAAGATAGTCTCACAAGACATTCGCTGAGGCATAGGAATCCTTCAGAAGTCGCAATGCTCAAATGTTATTCTTGTTCATACCAGACTGTAGATAAAAGTAACCTCAACAAACATTTGTGGAGGCATAAAGTTgcttcagaagtaacaatgctCAAATGTGATGATTGTTCCTTTCAAACGAAATATAAAAACAGCCTCACAAGTCATTCGCTGAggcataaggatccttcagaagtagCAATGCTCAAATGTGACGATTGTTCCTTTCAAACGAAATATAAAGAGAGTCTCTCAAGACATTCGCTGAAGCATAGGAATCCTTCAGTAGCAATGctcaaatgtgattcttgttcatatcagactgTAGATAAAGGTAACCTCAAAAAACATTTGCTGAGGCATAAGGTTCCTTTAGAAGTAACAATATACAGATGTGACGATTGTTCCTTTCAAACGAGATATAAAGATAGTTTAACAAGACATTTGCTGATGCATAAGGATTCTTCAGAAGTAGCATTGCTCAAATGTGACGATTGTTCCTTTCAAACTAAATATAAAAAGAGTTTCAAAAGTCATTCGTTGAGGCATAAGGAAGGAGCAATGCTCAAATGTCGCGATTGTTCCTTTCAAACGAAATATAAAGATAGTCTCGCAAGACATTCGCTGAGGCATAGGAATCCTTCAGAAGTAGCCATGctcaaatgtgattcttgttcataCCAGACTGTAGATAAAAGTAACTTCAACAGACATTTGCGAAGGCATAAAGTtccttcagaaaaatttggaTTTATGGATATATCTAAGGAAGTTATGGCATGTTTTGAATGCACCAATAATCTTGAAGTGTTCTTTAAATTAAGATCAGCTTGTGATTTTACGAGGGAGCAGTCATTGTCGACTAATCTCAAAGACAATATCGATCTGGATCCAGAAAAGACTgagattataaataatttaatatttacagaatccaaaaatgaagaaaaatgttGGTTTTGTTCAAAATCTAATGAAATAGAATTCCTTACATCATTGAACGAATcaaaaaaacatacttttttgGTGGATATGCTAAAGGAACATATTCCTATATTAAATTTAAATATTACAGAAGAACTTTTAACATGTGAGACCTGCCTCAATGAGTTGCaaggtattttaaattttataatgaaGTATTTGGATGTGGAACAGAAAATAAGTGAATATACACAAATTAAAGGAATAGATGAAGAAGGTGAGATAGACTTAAAGGATGTACAACAATTTACATTCGAACAGACGGTAAAATTTGAGAGGGAACCCATGGATGTAAATGAATTAAAAGAGACATATGACCAGTTTCAAGAAGGATGTGCCATGCAGCCTGAAGCTGGAATAAAATGTGAGGAGGAAGTAGATAATTCAGAGTTGTTGATTAAAATAGAAGATATTGATGTTAAATTAGAACACAATGATTGCGATAGgACTGTAAATGACGTCATCCTACCACTACCAGAAGTCAACAGGAtgttgaaaagaaaaaagaaatgtttACCAAAACTTGAGCAGTATCCGTCAGAACCGTCCATTAAGCGTGCATTGAAGAATAAAAGCGATGTTCATATTCCTTCAGAAATAACAATGCACAAATGTGATTTTTGTTCATTTCAGACCAAAGTTAAATGTCACCTTAAAAGTCActtgctgaagcataaagatccttTAGAAATAACAATGCTCAACTGTGACTCTCAATCATATCATGCTGTAAATAAAAGTCACCTCAAAAGACATTTGCTGATGCATGAGGATCCCCCAAAAGTAACAACATACAGATGTAGCAATTGTTCCTTTCAATCGATAAATAGAcgcaacttaaaaaataatttgttgatgcataaggatccttcagaaggAGCTATGctcaaatgtgattcttgtttaTATCAGACTGTAAAGAAAAATAACCTCAAAAGACATTTGCTGATGCATGAGGATCCCCCAAAAGTAACAACATACAGATGTGGCAAATGTTCCTTTCAATCGATACATAGAGGCAGCTTCAGAAATCATTTGTTGAcacataaggatccttcagaaggAGCTATGCTCAAATGTAATTCTTGTTTATATCAGACTCTAAAGAAAAGTAACCTCAAAAGACATTTGGTGAGGCATAAGAATCCTTTAGAAGAAGAAATgctcaaatgtgactcttgttcatacCAGACTATAGATAAAAGTCGCCTCAAAAAACATCTGCGGGTGCATGAGGATCTTTCAGAAGTACCATTGCTCAAATGTGACTTTTGTTCATATCAGACTAAGTTTAAGAGGTACCTGAAAACACATTCATTAAAGCATAAGGATCCGTCAGAAGCAACAATGCTCAAATGTGACTCATGTTTATATCAGACTGTAGTTAAAAGTAACCTCAAGAAACATTTCCTgaagcataaggatccttcagaagtagCAATGCTCAAATGTGACGATTGTTCCTTTCAAACGAAATATAAAAAGAGTTTCACAAGACATTTGCTGATGCATCAGGATTCTTCAGAAGTAGCATTGTTCAAATGTGACAATTGTTCCTTTCAAACTAAATATAAACAGAGTCTCAAAAGTCATTTGTTGAggcataaggatccttcagaagcagcaatgcacaaatgtgactcttgttcctACCAGACTGTAGATAAAAATTACCTCAGAAgacatttgctgaagcataaggATCATTCCGAAGCAACAATGTAA
Protein Sequence: MCGVLIRERDATQLVLENSVSNVMIGDYGGFIAKVIGETDVFLKVNRAEGAVKALILPSSAQEVPVVIRQIFLNRPEVLTIVFGETVRLLSADDDVNTMLNLPPNKIPLWVKENAVIPPKTVALVVVTWRSVTDKDVYILGNEYYVDECITKGGRKFGYMDISKEVVACFECTNNLEVFFKFRSAHDFRRGQSLSANDKVDINLDPEKIEIINNLILTESKNAEKCWFCSKTNEIEFLTSLNESKEHTFLVDMLKEHIPILNLNITEELLTCETCLNELQGILNFIMKYLDVEQKISEYTQIKGIDEEGEIDLKDVQQFTFEQTVKFEREPMDLNELKETYDQFQEGCAMQPEAGIKCEEEVDNSELFIKTEDVDVKLEHSDYDRTVNDIILPQPEVKRRLKRKKKCLMPKLEQDLSEPSIKRALKNKSDVHIYKDPSEVEILKCDSCSYQTVDKSNLRKHLWRHKVALVVTMLKCDDCSFQTKYKNRFTNHTLRHKDPSEVAMLKCGDCSFQTKYKDSLTRHSLRHRNPSEVAMLKCYSCSYQTVDKSNLNKHLWRHKVASEVTMLKCDDCSFQTKYKNSLTSHSLRHKDPSEVAMLKCDDCSFQTKYKESLSRHSLKHRNPSVAMLKCDSCSYQTVDKGNLKKHLLRHKVPLEVTIYRCDDCSFQTRYKDSLTRHLLMHKDSSEVALLKCDDCSFQTKYKKSFKSHSLRHKEGAMLKCRDCSFQTKYKDSLARHSLRHRNPSEVAMLKCDSCSYQTVDKSNFNRHLRRHKVPSEKFGFMDISKEVMACFECTNNLEVFFKLRSACDFTREQSLSTNLKDNIDLDPEKTEIINNLIFTESKNEEKCWFCSKSNEIEFLTSLNESKKHTFLVDMLKEHIPILNLNITEELLTCETCLNELQGILNFIMKYLDVEQKISEYTQIKGIDEEGEIDLKDVQQFTFEQTVKFEREPMDVNELKETYDQFQEGCAMQPEAGIKCEEEVDNSELLIKIEDIDVKLEHNDCDRTVNDVILPLPEVNRMLKRKKKCLPKLEQYPSEPSIKRALKNKSDVHIPSEITMHKCDFCSFQTKVKCHLKSHLLKHKDPLEITMLNCDSQSYHAVNKSHLKRHLLMHEDPPKVTTYRCSNCSFQSINRRNLKNNLLMHKDPSEGAMLKCDSCLYQTVKKNNLKRHLLMHEDPPKVTTYRCGKCSFQSIHRGSFRNHLLTHKDPSEGAMLKCNSCLYQTLKKSNLKRHLVRHKNPLEEEMLKCDSCSYQTIDKSRLKKHLRVHEDLSEVPLLKCDFCSYQTKFKRYLKTHSLKHKDPSEATMLKCDSCLYQTVVKSNLKKHFLKHKDPSEVAMLKCDDCSFQTKYKKSFTRHLLMHQDSSEVALFKCDNCSFQTKYKQSLKSHLLRHKDPSEAAMHKCDSCSYQTVDKNYLRRHLLKHKDHSEATM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -