Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757315.1:104895188-104937813[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.014 2 11.3 1.3 1 23 364 386 364 386 0.98

2 24 0.13 19 8.2 2.3 1 23 395 417 395 417 0.97

3 24 1.3 1.9e+02 5.0 0.6 1 23 426 448 426 448 0.91

4 24 0.11 15 8.5 3.7 1 23 457 479 457 479 0.99

5 24 0.011 1.6 11.6 5.1 1 20 488 507 488 511 0.95

6 24 0.026 3.7 10.4 3.0 1 23 520 542 520 542 0.97

7 24 0.027 3.8 10.4 1.7 1 23 548 570 548 570 0.98

8 24 0.025 3.5 10.5 2.2 1 23 581 603 581 603 0.97

9 24 0.049 7 9.6 6.9 1 23 612 634 612 634 0.98

10 24 0.029 4.1 10.3 1.3 1 23 643 665 643 665 0.98

11 24 0.0097 1.4 11.8 1.6 1 23 980 1002 980 1002 0.98

12 24 0.28 39 7.2 1.5 1 23 1011 1033 1011 1033 0.97

13 24 0.00095 0.13 14.9 1.1 1 23 1042 1064 1042 1064 0.98

14 24 0.0067 0.95 12.3 4.3 1 23 1073 1095 1073 1095 0.98

15 24 0.0005 0.07 15.8 1.4 1 23 1104 1127 1104 1127 0.96

16 24 0.14 20 8.1 1.4 1 23 1136 1158 1136 1158 0.97

17 24 0.043 6.1 9.7 1.7 1 23 1167 1189 1167 1189 0.97

18 24 2.7 3.8e+02 4.1 3.2 1 23 1198 1220 1198 1220 0.95

19 24 0.00022 0.031 16.9 0.9 1 23 1229 1252 1229 1252 0.97

20 24 0.0014 0.19 14.4 1.2 1 23 1261 1283 1261 1283 0.98

21 24 0.0081 1.2 12.0 1.1 1 23 1292 1314 1292 1314 0.96

22 24 0.0084 1.2 12.0 3.2 1 23 1322 1344 1322 1344 0.98

23 24 0.063 9 9.2 3.5 1 23 1353 1375 1353 1375 0.97

24 24 0.02 2.8 10.8 2.4 1 23 1384 1406 1384 1406 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.014	2	11.3	1.3	1	23	364	386	364	386	0.98
2	24	0.13	19	8.2	2.3	1	23	395	417	395	417	0.97
3	24	1.3	1.9e+02	5.0	0.6	1	23	426	448	426	448	0.91
4	24	0.11	15	8.5	3.7	1	23	457	479	457	479	0.99
5	24	0.011	1.6	11.6	5.1	1	20	488	507	488	511	0.95
6	24	0.026	3.7	10.4	3.0	1	23	520	542	520	542	0.97
7	24	0.027	3.8	10.4	1.7	1	23	548	570	548	570	0.98
8	24	0.025	3.5	10.5	2.2	1	23	581	603	581	603	0.97
9	24	0.049	7	9.6	6.9	1	23	612	634	612	634	0.98
10	24	0.029	4.1	10.3	1.3	1	23	643	665	643	665	0.98
11	24	0.0097	1.4	11.8	1.6	1	23	980	1002	980	1002	0.98
12	24	0.28	39	7.2	1.5	1	23	1011	1033	1011	1033	0.97
13	24	0.00095	0.13	14.9	1.1	1	23	1042	1064	1042	1064	0.98
14	24	0.0067	0.95	12.3	4.3	1	23	1073	1095	1073	1095	0.98
15	24	0.0005	0.07	15.8	1.4	1	23	1104	1127	1104	1127	0.96
16	24	0.14	20	8.1	1.4	1	23	1136	1158	1136	1158	0.97
17	24	0.043	6.1	9.7	1.7	1	23	1167	1189	1167	1189	0.97
18	24	2.7	3.8e+02	4.1	3.2	1	23	1198	1220	1198	1220	0.95
19	24	0.00022	0.031	16.9	0.9	1	23	1229	1252	1229	1252	0.97
20	24	0.0014	0.19	14.4	1.2	1	23	1261	1283	1261	1283	0.98
21	24	0.0081	1.2	12.0	1.1	1	23	1292	1314	1292	1314	0.96
22	24	0.0084	1.2	12.0	3.2	1	23	1322	1344	1322	1344	0.98
23	24	0.063	9	9.2	3.5	1	23	1353	1375	1353	1375	0.97
24	24	0.02	2.8	10.8	2.4	1	23	1384	1406	1384	1406	0.97

Sequence Information

Coding Sequence: ATGGGCATGCGTGCTTTGTTTCTTAAAGTTAAGTTTACTTTAAGCCAAATAAATCAGAGGCATGAATTAAAGAATTCGAATATATTTAAGTACACGGTGACATGCATTCAATGTACCAATAACCTCCAAGTATTCCTTAACTTGAAATCAGCCTGTGCTGGTATAAAGAAGAGAGCATTGCTTATAGCAAATCCAAGCAACAATGTCAGCTTGGATCCAGCAAATACTCAAAATAGAAAAGATGTAAAACCGGTTATAGAGCTCAAAAATGAGATAGGATGTAGTTTTTGTACCAAGTCGACAGGAGAAGAAAACTTTATATCATTAAATGAATCAAATGAAAACATGTTCTCAATGGATATTCTACAGAAATATATTCCAGAactgaatgttaataataatgaACAACTTTTAACTTGCAAAACCTGTCTTGATGGAATGCAAGGTGTTTCCAATTTCTTAACAAAGTGTTTGTATGtggaagagaaaataagtaaatatattgaaatagaGGGAATGGATGGTAGAGAGCATGTAGAATtacagaatgtacaacaattcATATTCAAACCAACATTCGAGGGTCAATCTTGCCACATAAATACAACAGTCCAGGCACATGATAGCATTCAAGACGAATTTACCACAAAAGCAGGAAGTGGAATAACATATCAAATAGAAGCAGATAACCTCAACTCGTgtgttaaaaatgaaaatgttgatACTAAATCAGAGGATGATGATATTAAATCAGATGTTGCTTTTGAATCAGAAGATGTTGATATTAAATCTGACGATAGTATTAAATCAGAAGATATTGATATTAAATCAGAGGACATTGATATTAAATCAGAGGATGTCGACATTAAATCAGATGTCGATGATGTTTTTGTGGAATCAGAAGATGATATTGATTTTATATCTGAGGATAATACTGAATTACAAGATGATATTAAATCAGAGGAAGTTGATATTAAACCAGAAGATATTGATATGAAATCAGAAGAAAGCGATCATGATAGATTTAAAGAACCATGTGTCAAAATCAATTTGAATTATGATCACAAGAAGCCTTTAGGAATAACAATGCATAAGTGTGATATATGCACATATGAGACAATATATAGGGATCTTCTCAACGATCACTTATCAACCCATAAAAGTCGTAGAGGAATAAAAGTATTCAAGTGTGACTCGTGTGTATATGAGACAAAACGTAAGGCTCACCTTAAGTTACATTCATTGGTCCATAAAAGTTCTTCAGATGTAACAATGTTCAAATGTGCATTATGTGATTATCAGGCAAAACGTAAGGCTTCTCTTAAGCCACACTTTTTACTCCATAGAAATCCTTCAGAGTTAACGATGTTCAAGTGTGAAATGTGTTCATATgagtcaaaatttaagaaatacctAGACCGACACAAGATGACCCATAAAAGTGCATCGGAGATagaaatgtttaaatgtgaaatgtgtaaatttgaaacaaaacgtAAGGATCATCTTAAGAGACACATTTTATGCGCACATGAGAGTATTTCAGAGATAAATGTGTTCAAGTGTGAATTGTGTGTATTTGAGACAAAACGTAAATACTCTCTTAAGAAGCACTTGTTGTTCCATAAGCGTTCCTCATTATTCAAATGTGCAATGTGTAATTATCAGACAGATCGTAAGTATCGTCTTAAGTCACACATTTTGCTCCATAGAAGTCCTTCAGACAACAATGTTAAATTGTTCAATTGTGAAATATGTGAATTTAAGACAAGATATAAGACAAGTTTGAACCAGCACAAAATTACCCATGAAAGTACGTTGAATATTACAAAGTTTAAATGTAAATTGTGTGAATTTGAGACGAGACATAAGCATTATCTTAAGAAACACTTGTTGATCCATAAAAATCCTTTAGAATTAACGATGTTCAAGTGTGAAATGTGTGAATTCGAGACAAAACGTAAGGATTCTATTAAGAATCACACTTTGATCCATAGAAGTCCTTCAGAGTTAATGATGTTCAAGTGTGAAATGTGTCCATATAAGGCAAAATCAAATCCAGGAAAAGATGTCGGCTTGGATCCAGTAAATACGCAAAATAGAGAAAATCTAAAACCGGTTACAGAGCTCAAAGATGAGATAGGATGTATTTTTTGTACCAAGTCAGCTGGAGAAGAAAACTTTCTATCATTGAAAGTATCAAAGGAAAAGATgttctttgtgaatattttagAGAAATATATTCCAGAACTGaatGTTAGTAATAATGGACAACTTTTATCTTGCAAAGCCTGTCTTGATGGATTGCAAGGTGTTTCAAGTTTTTTAAAGAACTGTTTATATGtggaagagaaaataagtaaatatattgaaatagaaGGAACTGATGATAGAGGACAGGTAGAATTACAGAATGTTCAACAGTTCATATTCAAACCGACATATGAGGGCCAATCTTGCCACATAAATTCAATGATTCAGGCACATGATAGCATTCAAGAAAAATTTGCCACAAAAGCTAAAAGTAAAATAACAGATCAAATAGAAGCCGATAACCTGAACTCGTTCGTTTATAATGAAAATGCTGATATTAAATCAAATGTTGAGCCTAAATCAGATGTCGATTTTAAatcacaaaataatattaaatctgAAGCTGTTGATATTAAATGTGGTGATAGTAGTACTTCAGAAGATGTTGATATTAAATCAGAGGATGTTGACATTAAATCAGATGTCAATGATGTTTTTGTGAAATCAGAAGATGGTAttaatttagaatatattaatattaaatctgaggATAATATTAAATTGCAAGACGATATTAAATCAGAAGATATTGATATGAAGTCAGGAGAAGGCCATCGTGATAGtttcaaaGAACCATCTGTCAATTTGGATTCTGATCGCAAGAAGTCTTTAGGCCTAACATTGTATAACTGTGATATGTGCACATATGAGACAACACATAGCGAACTTCTCAACGATCACTTATCGACCCATAAAAGTCGTAAAGGGATAAAAATATTCAAGTGTGACTCATGTGAATATGAAACTAAATATAGGGCCAGACTTAAGAGACACTCATTGGTCCATAAAAGTTCTTCAGACATAAAGATGTTCAAATGTGTAATATGTGATTATCAGACAAAATATAAGGATTCTCTTAAGACGCATATTTTGCTCCATAGAAGTCCTTCAGAATTAACCATGTTCAAGTGTGAAATGTGTACATATAAGACAAAACGTAAGAAATATCTGAATCAACACAAGATGATCCATAAAAGTGTATTGgagttaaaaatgtttaaatgtaaaaTGTGTGAATTCGAGACAAAACGTAAGGATAATCTTAACGCACACATTTTTCGCATACATAAAAGTATTtcagagataaaaatgttcaagtgtgAATTTTGTGAATTTGAGACAAAATATAAGAAATCTCTTGAACTGCACGTGTTGCTCCATAAAAGTCCTTCAGAGATAACAATGTTCAAGTGTTCTATGTGTGATTATCAAACAAAACGTGAGGGTTGTGTTAAGGCACACATTTTGCTCCATAAAAGTCCTTCAGAGTTAAAGATGTTCAAGTGTGAAATGTGTCCATATGAGTCAAAATGTAAGAAATACCTGGAACGACACAAGGTGATCCATAAGAGTGCATCGGATATAGAAACatttaaatgtgaaatgtgtGAATTTGAGACAAAACGTAAGGATAATCTTAACGCACACATTTTGCGCACACATAAAAATAATTCAGAGACAAAAATGTTCAAGTGTGAATTGTGTCAACTTGAGACAAAATATAAGGATTCTCTTAAAAAGCACTTGTTGGTCCATAAAAGTCCCtcagagataaaaatgttcaagtgtgAATCATGTGACTATGAGGCAAAATCTAGGAGTTATCTTAAGAAGCACTTGGTGCTCCATCAAAATCCTTCGGAGTTAATTTTCAATTGTGAAATATGTGAATTTAAGACTAGATATAAGAGAAGTTTGAACCGACACAAAATGACTCATGAGAGTACACTGGATATTACAAAGTTTAAATGTAAATTGTGTCAATTTGAGACACAACGTAAGGATTATCTTAAGAAGCACTTCTTGGTCCATAAAAATCTTTCAGAGTTAACGACGTTCAAGTGTGAAATGTGTGAATTTGAGACAAAATATAAGTATTCTCTTAAGAAGCACTCGTTGGTCCATAAAAGTCCTTCAGAGTTAACAATGTTCAATTGTAGAATGTGA
Protein Sequence: MGMRALFLKVKFTLSQINQRHELKNSNIFKYTVTCIQCTNNLQVFLNLKSACAGIKKRALLIANPSNNVSLDPANTQNRKDVKPVIELKNEIGCSFCTKSTGEENFISLNESNENMFSMDILQKYIPELNVNNNEQLLTCKTCLDGMQGVSNFLTKCLYVEEKISKYIEIEGMDGREHVELQNVQQFIFKPTFEGQSCHINTTVQAHDSIQDEFTTKAGSGITYQIEADNLNSCVKNENVDTKSEDDDIKSDVAFESEDVDIKSDDSIKSEDIDIKSEDIDIKSEDVDIKSDVDDVFVESEDDIDFISEDNTELQDDIKSEEVDIKPEDIDMKSEESDHDRFKEPCVKINLNYDHKKPLGITMHKCDICTYETIYRDLLNDHLSTHKSRRGIKVFKCDSCVYETKRKAHLKLHSLVHKSSSDVTMFKCALCDYQAKRKASLKPHFLLHRNPSELTMFKCEMCSYESKFKKYLDRHKMTHKSASEIEMFKCEMCKFETKRKDHLKRHILCAHESISEINVFKCELCVFETKRKYSLKKHLLFHKRSSLFKCAMCNYQTDRKYRLKSHILLHRSPSDNNVKLFNCEICEFKTRYKTSLNQHKITHESTLNITKFKCKLCEFETRHKHYLKKHLLIHKNPLELTMFKCEMCEFETKRKDSIKNHTLIHRSPSELMMFKCEMCPYKAKSNPGKDVGLDPVNTQNRENLKPVTELKDEIGCIFCTKSAGEENFLSLKVSKEKMFFVNILEKYIPELNVSNNGQLLSCKACLDGLQGVSSFLKNCLYVEEKISKYIEIEGTDDRGQVELQNVQQFIFKPTYEGQSCHINSMIQAHDSIQEKFATKAKSKITDQIEADNLNSFVYNENADIKSNVEPKSDVDFKSQNNIKSEAVDIKCGDSSTSEDVDIKSEDVDIKSDVNDVFVKSEDGINLEYINIKSEDNIKLQDDIKSEDIDMKSGEGHRDSFKEPSVNLDSDRKKSLGLTLYNCDMCTYETTHSELLNDHLSTHKSRKGIKIFKCDSCEYETKYRARLKRHSLVHKSSSDIKMFKCVICDYQTKYKDSLKTHILLHRSPSELTMFKCEMCTYKTKRKKYLNQHKMIHKSVLELKMFKCKMCEFETKRKDNLNAHIFRIHKSISEIKMFKCEFCEFETKYKKSLELHVLLHKSPSEITMFKCSMCDYQTKREGCVKAHILLHKSPSELKMFKCEMCPYESKCKKYLERHKVIHKSASDIETFKCEMCEFETKRKDNLNAHILRTHKNNSETKMFKCELCQLETKYKDSLKKHLLVHKSPSEIKMFKCESCDYEAKSRSYLKKHLVLHQNPSELIFNCEICEFKTRYKRSLNRHKMTHESTLDITKFKCKLCQFETQRKDYLKKHFLVHKNLSELTTFKCEMCEFETKYKYSLKKHSLVHKSPSELTMFNCRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -