Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757316.1:45874547-45905049[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00035 0.05 16.3 2.4 1 23 1015 1037 1015 1037 0.97

2 17 0.00029 0.041 16.6 1.8 1 20 1043 1062 1043 1065 0.94

3 17 6.1e-05 0.0087 18.7 0.8 1 23 1071 1093 1071 1093 0.98

4 17 0.00082 0.12 15.2 3.6 3 21 1101 1119 1099 1121 0.94

5 17 0.00011 0.015 17.9 4.6 1 23 1127 1149 1127 1149 0.99

6 17 0.0001 0.014 18.0 5.3 1 23 1155 1177 1155 1177 0.97

7 17 3.8e-05 0.0053 19.4 8.2 1 23 1183 1205 1183 1205 0.97

8 17 4e-07 5.6e-05 25.6 2.7 1 23 1211 1233 1211 1233 0.98

9 17 0.00029 0.042 16.6 6.7 1 23 1239 1261 1239 1261 0.97

10 17 3.5e-05 0.005 19.4 4.7 1 23 1267 1289 1267 1289 0.97

11 17 0.00014 0.019 17.6 8.0 1 23 1295 1317 1295 1317 0.98

12 17 0.00011 0.016 17.8 9.1 1 23 1323 1345 1323 1345 0.98

13 17 6.9e-05 0.0097 18.5 7.7 1 23 1351 1373 1351 1373 0.98

14 17 6.4e-05 0.0091 18.6 7.0 1 23 1379 1401 1379 1401 0.97

15 17 0.00025 0.036 16.7 0.4 1 23 1407 1429 1407 1429 0.97

16 17 0.36 51 6.8 5.0 1 23 1439 1461 1439 1461 0.98

17 17 7.6e-07 0.00011 24.7 0.9 1 23 1467 1489 1467 1489 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00035	0.05	16.3	2.4	1	23	1015	1037	1015	1037	0.97
2	17	0.00029	0.041	16.6	1.8	1	20	1043	1062	1043	1065	0.94
3	17	6.1e-05	0.0087	18.7	0.8	1	23	1071	1093	1071	1093	0.98
4	17	0.00082	0.12	15.2	3.6	3	21	1101	1119	1099	1121	0.94
5	17	0.00011	0.015	17.9	4.6	1	23	1127	1149	1127	1149	0.99
6	17	0.0001	0.014	18.0	5.3	1	23	1155	1177	1155	1177	0.97
7	17	3.8e-05	0.0053	19.4	8.2	1	23	1183	1205	1183	1205	0.97
8	17	4e-07	5.6e-05	25.6	2.7	1	23	1211	1233	1211	1233	0.98
9	17	0.00029	0.042	16.6	6.7	1	23	1239	1261	1239	1261	0.97
10	17	3.5e-05	0.005	19.4	4.7	1	23	1267	1289	1267	1289	0.97
11	17	0.00014	0.019	17.6	8.0	1	23	1295	1317	1295	1317	0.98
12	17	0.00011	0.016	17.8	9.1	1	23	1323	1345	1323	1345	0.98
13	17	6.9e-05	0.0097	18.5	7.7	1	23	1351	1373	1351	1373	0.98
14	17	6.4e-05	0.0091	18.6	7.0	1	23	1379	1401	1379	1401	0.97
15	17	0.00025	0.036	16.7	0.4	1	23	1407	1429	1407	1429	0.97
16	17	0.36	51	6.8	5.0	1	23	1439	1461	1439	1461	0.98
17	17	7.6e-07	0.00011	24.7	0.9	1	23	1467	1489	1467	1489	0.96

Sequence Information

Coding Sequence: ATGTTTAATATTGATAGTtatcagatattttataataagGGCACTGTCAATAAAAATGATGGTGTTTTAGTATACATAAGAGAAAACCTCAATTACGAACACAGCATTATTAAATTTGACCaaataaatattatcaaaatAGATATAATAAACTATAACAAGCAAAATATTAGCGTACTGGCTGTGTACAGACCTCCATCTACGTGCATCAGGAACTTTAATACATCCTTAGATCAATATCTACAAGAATATTCCACTATTGCTGACTACACGATAATATTAGGCGACATAAATATCGACATTCATCAAACTCAGGATATTTTAGCACTTGAATATCAAAATATCTTGTATTCCCATGGTTTTAAATCCTTTATAAATGATACAACCAGGGAAGAAAACGATAGTCATAGCTGCATAGATCACATCTTTATAAAGGATCCAAAAAACACCTCAGAAGAAATGACGATACCTTGCATAATAAAATCCAGAATAACGGATCATTACATAACCACCATACAGATAATACTCAGCAATGACTTAACGATTTCTAACACTAGTTCAAAAAACAGTATTAAGTATATTAACTACAACAAGCTAAGAGAAGCGCTTAAAAATATATCCTGGGAACAATTAGAATACGAAAACTTGGAAAATGCTACCAATAAGTTTATCAATATAATAAAGAGCGAGATAACTGCAtgcacaaaaattattaaaGGTACAACTCAAAGACCTCCACCAACTACTTCGGTGCCAACCGACTTAAGGGTTAACACAACAGCATTAAATGCGGTGGCGCTAAGCAGTGTGGCAAAATATTGGGTGTTAACAAATTTGTTACCTGGTCCTATCCCACAGGTTTCAGTGTATGGACTACCAGGAACAAGTAGAGAAAATCAAGGCAAATTAACgcagTTAGATTTGATTGATAATGAATGGTGGCCAGATTGTACAGATACTAACTTCTTAGCAGAACAACTTGCCAGGTCCCTAATTAATGTGTTAGATAAGCATGCACCTATAGAAGAAAAAGTACTCAAATGTAGTTGGGCCAATAAGATGTGGTGGACACCAACAATAGGTCAAGAGATATTAGAAAGAGACAGAATGTATAGAACAGCAATTATTACACAACAAGAAGTAGATTGGaggaaatacaaacaaaaaagaaatgcaGTTGTAAATAGCATAAGACAACAGAAAGAAATATTCTATCAGGAAAGAATAGATGAAGTTAAAGACAACCCTGTGGAAATGTGGAAAACTCTAAAACAATTagtcaaaaataataacaaaaaagaaaacaataaagaAGGCATTATATTTGACAATGTAATGGAAAAGAGCAATCAAAACGTAGCTAATAAATTTAATGCATACTTTTTGAATAGTTTAGAAGAACTGGTGACCTACCCTAACCAAGATCAACTCAATGAGGTTATAAATAATATGTCTAAATGTAATGTTAAATTGGAGAGATTTAAATTACTAGAATTCTACGAGTTAAGGAAAATagtaaaagaaatgaaaattaagAAAAGCAGTGTAGATGGAATAACAACAACTATTCTACAATCGGCATTTGAAATAATAGGGGACAGATTTCTACAGGTAATAAATAGTAGTCTAGAAGAGGGATGTTTTCCTAGAACATGGAAGTTGTCCATGATTATACCATTGGAGAAGAAAATAAATACCATTAAATGTGAAGAACATAGACCTATAAATATGGTGCCAACATACGAGAAACTACTAGAAATTATAGTGAATAATCaaattatacaatatattgaagaaaacaatttattaaccAAATACCAAGCAGGATTCAGAAATCAAAATTCATGTGAAAGTGCAATACAGACCGTTTTAGCAAAATGGAAAAATGCATTGaatgagaaaaaagttataggtGTTGTATTTTTAGACTTTCGTAGAGCATTTGAAACCATAAACAGAGATCTACTATTGTTAAAGTTACAAAACTATGGGTTAGGTGCTACAATCATTAAGTGGTTTAGTGAATATTTATCAAATAGAACTCAGGTGACAAAATATAACGACACTATATCAGCGTCGAAAGAGAATAGATTCGGAGTACCACAAGGGACGGAAGCAATGCTTGGTCAACACGCTGGACTTCTTCCAACGGATCCTTTGCTCCTGCAACAACATCCACAAATCCCTGTCAGTATTTCAGGTTCCCAAGCGAATTTGGGACTACCGACGGGTGCCCTACATCTTGATAATTCGCACAACTTAGCAAATCACCATCAAAATGAAAATATGTCATCACAGAACCAGAATCAGATGTCCAGAGACGTAAGGATGTCTCATTCCCAACAAAATCAGCAGCACGGAGGACAGCAGAACATGGTCCAAGTTCAAGTGCAGGATAACTTGGTGTCTGTTATTGAAGATAATAAAGACCAAAAGGATCTTATCGCAGCCCAGCTGCAAGCTGCTCAATTACAACTTAGCGAAAACCAACTTAATCAACAGGATTTAGATCGAGAAGACTTAAGTGGTGGACAAACACAAGTTCGAGTTCGTTTGGAAAACTCCGTTGAAAACGGTCAGAATCAATCGAACAATGAGCAGGACCAGTTAGCTGATACAATTCAAATTGTAAAAGATGAAAAAACGTTTCAGAATTGCAAACTCCTTGCTGGTGCTCAATTTGGATTGCAAGATCTGAAAGGGAATTTAATGGACGTGAGGACAGCTGATGGTAGTATAGTAAAAATACAAACCAATATGCAGGAGCAAGAACTAGCTAAAACCTTGGGGGTTGAAATGGTGCAGAATATGTACAAGGTTAATGTAGATGATTTGAATCAGTTGTTGGCTTATCATGAGATTTTTGGAAAACTACAAGGTGGGCAAGgagAAATTAACAATACCAATCagaatattgtgcaaaataacACAAACAACATTAACCTTCAACAAAATTCTGGTAATATTGCCATTATAGCAAAAGATGAGCAGGAAGCCTCTACTAGCAACATTGATAATGCGAATCCTCCAGCAGTTGGCACCCATGTCTGTGATCTTTGTGGAAAAATGTTCCAGTTTCGTTACCAACTCATTGTCCACAGGCGTTACCACACCGAACGCAAACCGTTTACTTGCCAAGTTTGTGGTAAAGCATTTACGAATGCCCAGGAGCTTAGCAGGCATGGAAAATGCCACCTAGGCGGTAGTATGTTTACATGTGCTGTGTGTTTTCATGTATTTGCTAATGCCGCATCACTAGAGCGTCACATGAAAAGACATTCGACTGATAAACCTTACGGTTGTACAATATGTGGCAAGAGTTTTGTTAGGAAAGAGCATCTGGACAACCACACTAGGTGTCATACAGGAGAGACGCCATATAGATGTCAGTACTGCGCTAAGACATTTACCAGAAAAGAACATATGGTTAACCATGTGAGAAAACACACGGGGGAGACTCCCCACAGATGTGAAATTTGTAAAAAGTCCTTTACGCGGAAGGAACATTTTATGAATCATGTTATGTGGCATACTGGCGAGACGCCTCACCACTGCACTATCTGTGGAAAGAAGTACACGAGAAAGGAGCATCTTTCCAATCATATGAGGAGTCATACCAATGATACACCTTTTAGGTGTGAAATTTGTGGTAAATCCTTTACAAGGAAGGAGCATTTCACGAACCATATTATGTGGCACACTGGTGAAACGCCTCATCGCTGTGATTTTTGCTCGAAAACGTTTACTAGGAAAGAACATTTGTTAAATCATGTTAGGCAGCATACAGGAGAATCACCCCATAGATGTAATTTCTGTCCTAAAGCTTTTACGAGAAAAGACCACTTAGTTAATCATGTGAGGCAGCATACTGGAGAGTCGCCACATAAATGCACTTTCTGTACGAAGTCTTTTACTAGGAAGGAACACTTAAATAATCATGTTAGACAACATACAGGAGAGTCACCTCATAGGTGTCATTTTTGTTCGAAGTCTTTCACTAGGAAAGAACATTTAACCAATCATGTTAGGATACATACAGgTGAATCCCCACACAGGTGCGAGTTTTGTCAAAAGACCTTCACCCGTAAGGAACATTTAACCAACCACTTAAGACAGCATACTGGAGAAACACCCCATTGCTGTAATATTTGTAATAAACCCTACACCCGTAAAGAGCACTTAGTTAATCATATGCGTTCTCATACTGGCGAGCGTCCATTTGCCTGCAATGAATGTGGGAAGTCCTTCCCTCTCAAAGGCAACTTACTGTTTCACCAGAGATCCCATAATAAAGGAGCTGCTGCTGAGCGACCATTTCGATGTGATCTATGCGAGAAAGATTTCATGTGCAAAGGTCATCTAGTTTCCCATAGACGATCGCATAGTGGTGACAGGCCCCACGCGTGCCCAGATTGTGGTAAGACGTTCGTAGAAAAGGGTAATATGTTGAGACATATGCGGAAACATGCAACCGAAAATGGTACAACTGTGCAAGTGAATAATCTTACCAACCAGCAGGTAAACCAGGTGCAGCAGCAAGGTAACCCTCAACAACAACAAAACCCTCAAGTAAATAATGGGAGTATTCAAATACCCCAAGTGCAAGTAAGTCAGGCACAACAACAGCAGCAGCAACAACagcagcagcaacaacaacagcagcagcaacaacaacagcagcagcaacaacaacaGCAGCAACAGCAACAAAATTCTAATAGTAATATTGTGCAAACAACTCACTTGCCAATGCATCCACCCAATAGTCATCCCGTTGTTGTGCCCACAGCAAACGGTAATGTTTTGGCCTCATATTAG
Protein Sequence: MFNIDSYQIFYNKGTVNKNDGVLVYIRENLNYEHSIIKFDQINIIKIDIINYNKQNISVLAVYRPPSTCIRNFNTSLDQYLQEYSTIADYTIILGDINIDIHQTQDILALEYQNILYSHGFKSFINDTTREENDSHSCIDHIFIKDPKNTSEEMTIPCIIKSRITDHYITTIQIILSNDLTISNTSSKNSIKYINYNKLREALKNISWEQLEYENLENATNKFINIIKSEITACTKIIKGTTQRPPPTTSVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGTSRENQGKLTQLDLIDNEWWPDCTDTNFLAEQLARSLINVLDKHAPIEEKVLKCSWANKMWWTPTIGQEILERDRMYRTAIITQQEVDWRKYKQKRNAVVNSIRQQKEIFYQERIDEVKDNPVEMWKTLKQLVKNNNKKENNKEGIIFDNVMEKSNQNVANKFNAYFLNSLEELVTYPNQDQLNEVINNMSKCNVKLERFKLLEFYELRKIVKEMKIKKSSVDGITTTILQSAFEIIGDRFLQVINSSLEEGCFPRTWKLSMIIPLEKKINTIKCEEHRPINMVPTYEKLLEIIVNNQIIQYIEENNLLTKYQAGFRNQNSCESAIQTVLAKWKNALNEKKVIGVVFLDFRRAFETINRDLLLLKLQNYGLGATIIKWFSEYLSNRTQVTKYNDTISASKENRFGVPQGTEAMLGQHAGLLPTDPLLLQQHPQIPVSISGSQANLGLPTGALHLDNSHNLANHHQNENMSSQNQNQMSRDVRMSHSQQNQQHGGQQNMVQVQVQDNLVSVIEDNKDQKDLIAAQLQAAQLQLSENQLNQQDLDREDLSGGQTQVRVRLENSVENGQNQSNNEQDQLADTIQIVKDEKTFQNCKLLAGAQFGLQDLKGNLMDVRTADGSIVKIQTNMQEQELAKTLGVEMVQNMYKVNVDDLNQLLAYHEIFGKLQGGQGEINNTNQNIVQNNTNNINLQQNSGNIAIIAKDEQEASTSNIDNANPPAVGTHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELSRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYGCTICGKSFVRKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLSNHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNICNKPYTRKEHLVNHMRSHTGERPFACNECGKSFPLKGNLLFHQRSHNKGAAAERPFRCDLCEKDFMCKGHLVSHRRSHSGDRPHACPDCGKTFVEKGNMLRHMRKHATENGTTVQVNNLTNQQVNQVQQQGNPQQQQNPQVNNGSIQIPQVQVSQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNSNSNIVQTTHLPMHPPNSHPVVVPTANGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -