Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757315.1:19569091-19575362[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00062 0.087 15.5 0.6 2 23 110 132 109 132 0.92

2 28 0.053 7.5 9.5 0.1 1 23 169 192 169 192 0.93

3 28 0.01 1.5 11.7 1.5 3 23 198 218 197 218 0.97

4 28 3.2 4.6e+02 3.8 0.8 1 19 226 244 226 246 0.94

5 28 0.00068 0.097 15.4 0.7 1 21 252 272 252 273 0.95

6 28 1.9 2.7e+02 4.6 0.3 1 23 320 343 320 343 0.89

7 28 5.6 7.9e+02 3.1 0.2 1 12 367 378 367 385 0.80

8 28 0.00058 0.082 15.6 0.7 1 23 400 422 400 422 0.98

9 28 2.9e-05 0.0041 19.7 0.9 1 23 428 450 428 450 0.96

10 28 9.9e-06 0.0014 21.2 1.2 1 23 456 479 456 479 0.94

11 28 0.00039 0.055 16.2 0.8 3 23 489 509 487 509 0.98

12 28 6.8e-06 0.00097 21.7 1.7 1 23 515 537 515 537 0.98

13 28 0.0017 0.24 14.1 1.3 1 23 543 566 543 566 0.96

14 28 0.025 3.6 10.5 1.3 1 23 675 698 675 698 0.94

15 28 0.022 3.1 10.6 0.1 1 20 714 733 714 735 0.93

16 28 0.029 4.1 10.3 0.9 1 22 749 770 749 770 0.95

17 28 0.058 8.3 9.3 2.5 1 21 782 802 782 803 0.94

18 28 0.0004 0.057 16.1 0.2 3 23 818 839 816 839 0.96

19 28 0.48 68 6.4 1.7 1 23 844 867 844 867 0.93

20 28 4.8 6.8e+02 3.3 0.1 1 11 885 895 885 903 0.80

21 28 0.0011 0.16 14.7 2.3 1 23 918 940 918 940 0.97

22 28 6.5e-05 0.0093 18.6 0.6 3 23 948 968 947 968 0.96

23 28 1.1e-05 0.0015 21.1 2.8 1 23 974 997 974 997 0.97

24 28 0.0017 0.25 14.1 5.0 1 23 1005 1027 1005 1027 0.98

25 28 0.00017 0.024 17.3 0.9 1 23 1033 1055 1033 1055 0.96

26 28 0.004 0.57 13.0 4.1 1 23 1061 1084 1061 1084 0.96

27 28 0.076 11 9.0 5.5 1 23 1098 1120 1098 1120 0.96

28 28 9.7e-06 0.0014 21.2 1.4 1 23 1126 1149 1126 1149 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00062	0.087	15.5	0.6	2	23	110	132	109	132	0.92
2	28	0.053	7.5	9.5	0.1	1	23	169	192	169	192	0.93
3	28	0.01	1.5	11.7	1.5	3	23	198	218	197	218	0.97
4	28	3.2	4.6e+02	3.8	0.8	1	19	226	244	226	246	0.94
5	28	0.00068	0.097	15.4	0.7	1	21	252	272	252	273	0.95
6	28	1.9	2.7e+02	4.6	0.3	1	23	320	343	320	343	0.89
7	28	5.6	7.9e+02	3.1	0.2	1	12	367	378	367	385	0.80
8	28	0.00058	0.082	15.6	0.7	1	23	400	422	400	422	0.98
9	28	2.9e-05	0.0041	19.7	0.9	1	23	428	450	428	450	0.96
10	28	9.9e-06	0.0014	21.2	1.2	1	23	456	479	456	479	0.94
11	28	0.00039	0.055	16.2	0.8	3	23	489	509	487	509	0.98
12	28	6.8e-06	0.00097	21.7	1.7	1	23	515	537	515	537	0.98
13	28	0.0017	0.24	14.1	1.3	1	23	543	566	543	566	0.96
14	28	0.025	3.6	10.5	1.3	1	23	675	698	675	698	0.94
15	28	0.022	3.1	10.6	0.1	1	20	714	733	714	735	0.93
16	28	0.029	4.1	10.3	0.9	1	22	749	770	749	770	0.95
17	28	0.058	8.3	9.3	2.5	1	21	782	802	782	803	0.94
18	28	0.0004	0.057	16.1	0.2	3	23	818	839	816	839	0.96
19	28	0.48	68	6.4	1.7	1	23	844	867	844	867	0.93
20	28	4.8	6.8e+02	3.3	0.1	1	11	885	895	885	903	0.80
21	28	0.0011	0.16	14.7	2.3	1	23	918	940	918	940	0.97
22	28	6.5e-05	0.0093	18.6	0.6	3	23	948	968	947	968	0.96
23	28	1.1e-05	0.0015	21.1	2.8	1	23	974	997	974	997	0.97
24	28	0.0017	0.25	14.1	5.0	1	23	1005	1027	1005	1027	0.98
25	28	0.00017	0.024	17.3	0.9	1	23	1033	1055	1033	1055	0.96
26	28	0.004	0.57	13.0	4.1	1	23	1061	1084	1061	1084	0.96
27	28	0.076	11	9.0	5.5	1	23	1098	1120	1098	1120	0.96
28	28	9.7e-06	0.0014	21.2	1.4	1	23	1126	1149	1126	1149	0.97

Sequence Information

Coding Sequence: ATGGACTTAGAACAATGTAGTATTTGTCTAGAAAAATATAACTCTACTGTAAGTGTAGAAGATTCAGATGAATATAATGTGAAGTGGTTTACGAAATTACAGTTCATAGTTCCCGAattgGAATGGCTTGAGGAATATCTAATCTGTGAACCGTGCAAAAAACGAGTGGAACAAGCCTGGGAGTTTAAAAAACTTGTTCTAAATTTAGAAGCAGAAAGAAGATTAGGATTATCCAAAAAAGAAACATATCCAGCAGAAGAAAATTCCGATTTTAAAGATAATTGTGATATTGAGTATTACTATGAAGAAGACAGTAATAAGGGAGTTGTTTGTCGGGTATGTTCTAAAATATTTACAACCCAAACCCAACTGCAGCAGCATAAACTGCAAATTCATACTGGGGACAGTTTTGATGGAGAAGAAGCCTCTCGGTTTGAAGATGGCTTACAAACAGATTATAAAAGTGAAGATAACTTAACGACTAGAAATGCCAGTAGTATTGTTTTTTCATGTTATGACTGCGGTTTAGGTTTTGGAACAAAAGAAGACTTACTGTTTCACATCGAGAGTGAACATGGCCAGtttaaattatgtttaatatGTGATAAACTATGTTCTAATCGGTCGGCATTAGACAATCATATGAAAGACCACAAAGTTGGAATATTTAAAGAGTTTGCTTGTTGTGTGTGTTTGCAAAAATTTGAATCTAAGATAAAATTAAATGAACATGCTACGCTGTGTATATCTAAATTTCAATGTGCCAAATGTCAACAGGGTTACAgtacaaaaaaacaattaaatgctCACTTAAAATCGTGTAAAAATCAGAACAGAAGTAATATACATCAATGTACTTGCAACAACTTTTACACCACAGAGAGAAATCTAAATTTACACAAGATATGGTGTGCTAGACGGAAGGAACAAGAAACGGGTTCGaaagaaattctaaattataGTTGCAATATATGTGTTATTAAATTTGAATCTGTTGAAGAATATGATTCGCATAATTTGTCAAAACATGACTTGCAGGAATCCCGCGTATCACCTCCAAAGGTTAGAGCAAGAAGAGGTCGGAAGCctgtaaaaatatttacttgtGAAAACTGCAATGAGCAGTTCGATTATGTAAAATTAGTTGTTGAACATTGTGTATCGGTACATGGTatggaagaaaaaaatgttaaaccaTATTCCTGTGATAAATGTGAGATGCGCTTTGCCTCTTCTGCTAATTTAGATCAACATCGCAACTACCACGAGAAAAATCGTACACACATTTGCACTTTATGTGGCAAAGGCTTTATAACAAAAAGTGACCTAACAGTTCATGAGTATACCCACTACAATCGCAGAAATTATAAGTGTAGTCAGTGTGACAAGGCATTTAACACCAATAAAAACCTACGAACTCACAACTTAGTGGTGCACACTGATCGTAGCTTGTGGAAATATGGCTGTACAATTTGCGAAAAACGGTTTCCTTTGAAGACCAATTATGAGCAGCACCTACGCAGACACACGGGGGAGAAAAAATATGTGTGTCATATTTGTAGGAAGCCGTTCATCAGCAAAAGCGAAATGAAGAGACATATAAACTTACATTCGAATATAAAGGCATTTAAATGCAGCCAGTGTGATAAAGAATACAAGGAGAGAAGGACTTATCAAGCACACTTGGCCAAGATACACGGACAGTGCACTATATGTTTAGAAACTGAAAACACAATCCAAAATATAACAGCACTAGATGAATATAAcgtaaaattttctataaaattgcaGTGTATTGCTCCCGAAGTGGAATGGTTGGAAGTCTATATGATATGTAGCAACTGTATAGAGCTCCTCAATAGTGCGTACAAGTTTAAAGTACAATGTTTATCTGTCAGTTTAGATACATTTACAGTTGATTCAATAAATGATGTCGTTATTGAATATGTCGAATGTGATGATGTGACGATATGTAATGAAAATGAAATCGAAAATTGTGACAGTGATACTACAGATGATGTTTTTATATGCTATGAATGTGAAGAAAAATGTAACACAAAAACTGACTTGATTGAACACATTACAAATTCTCATACAGTCCACAGCGATGAAAATAGTGGAATATATAAACTCAAACAGTTTGAATGTACCAAGTGTGGAAAGAAATATGTCTTAGAAGCTACACTGAATGAACATGAACTTAATTGTGATGGAATTAGAAGGCACGCTAAAAGTACAGCTGAATACCAATGTGACAGGTGCCAAAAGTAttataccacaaaaaaaatattagaggcTCACATAAAAAAGTGTAGGCAAGATGACAATTACAGAAAAACCGAGTTTCAGTGTACATCatgtaataaatattatataagcTCGAAAACATTGAAAGATCATTTTAAGCGAGGATGTAAAAAGGATGAATGTGATAGTGTCCAAGCCATATTTTGTAAGATTTGCGATGAATACTTCAAATCTCTAGTTTTATTACAACAGCATATACTTACCGAGCATAAAACATCTGAACATCACTGTCTTATATGTATAGAAAACTTCGACACCAAAGAGGAATACAATAGTCATATGAATGCAGAACATGCGCCCAAAAAAATTGCAGACAAAAAACGAGGCCGAGGGTCTTCTAGAAAATTTACCTGTGAGGTTTGTAACGAAGAGTTCATTTTACTAAAGACAATCATCGAACACTGCGTTAATGTGCACGCTATGAATGAAAAGACAGTAAAACCGTATTCATGTGAAAAGTGCGACAGCCGATTCCGCTCCTCTACTAATTTATTAAACCATAAGTTGTATCATGATAGGAATCGTACCAATATATGCAGTTTTTGTGGGAAAAGCTTTATCACTAAAAATGACTTGACTGCTCATGAGTTCACACATTTCAACCAGAGAAACTATAAATGCGACAAGTGTGAAAAGGCTTTTAAAACGAACACCAACCTACGGACTCATCACTTGATAGTTCACACCGACCCTGCTTTATGGAAGTACGTTTGTCATATATGCAGTAAGCGCTTTCCTCAAAAATCCAATCATGATCAGCATATACGCAGACATATCGGTGAAAAGAACTTTGTTTGTCAGCTTTGCAAAAAGTCGTTCGCTAGCAAAAGTGAGATGCAGGAACATGTCAGTTATCACTCCAATGTTAGAGCCTATAGATGTGACCACTGTGGAAAGGAATATAGAAAAAAACATACTTACGATGTACACTTAGCTAAAGTTCATAGCATTGGTGATACCAAAATACCTGTAAGAGAGAAAAAACATGCTTGCCATATTTGCCCAAGTCGCTTTTATGACAGATTAAAACTAGCGAGGCATCTCTGTACCCACTCTGGACTGAAACCCTTCCCGTGCTATGCCTGCGATAAAAAATTTACAGATAAATCTTATTTGAAGAATCACCTGAAGACGGCGCATAATATAGTTGAAGAAACTATGCACGAATGA
Protein Sequence: MDLEQCSICLEKYNSTVSVEDSDEYNVKWFTKLQFIVPELEWLEEYLICEPCKKRVEQAWEFKKLVLNLEAERRLGLSKKETYPAEENSDFKDNCDIEYYYEEDSNKGVVCRVCSKIFTTQTQLQQHKLQIHTGDSFDGEEASRFEDGLQTDYKSEDNLTTRNASSIVFSCYDCGLGFGTKEDLLFHIESEHGQFKLCLICDKLCSNRSALDNHMKDHKVGIFKEFACCVCLQKFESKIKLNEHATLCISKFQCAKCQQGYSTKKQLNAHLKSCKNQNRSNIHQCTCNNFYTTERNLNLHKIWCARRKEQETGSKEILNYSCNICVIKFESVEEYDSHNLSKHDLQESRVSPPKVRARRGRKPVKIFTCENCNEQFDYVKLVVEHCVSVHGMEEKNVKPYSCDKCEMRFASSANLDQHRNYHEKNRTHICTLCGKGFITKSDLTVHEYTHYNRRNYKCSQCDKAFNTNKNLRTHNLVVHTDRSLWKYGCTICEKRFPLKTNYEQHLRRHTGEKKYVCHICRKPFISKSEMKRHINLHSNIKAFKCSQCDKEYKERRTYQAHLAKIHGQCTICLETENTIQNITALDEYNVKFSIKLQCIAPEVEWLEVYMICSNCIELLNSAYKFKVQCLSVSLDTFTVDSINDVVIEYVECDDVTICNENEIENCDSDTTDDVFICYECEEKCNTKTDLIEHITNSHTVHSDENSGIYKLKQFECTKCGKKYVLEATLNEHELNCDGIRRHAKSTAEYQCDRCQKYYTTKKILEAHIKKCRQDDNYRKTEFQCTSCNKYYISSKTLKDHFKRGCKKDECDSVQAIFCKICDEYFKSLVLLQQHILTEHKTSEHHCLICIENFDTKEEYNSHMNAEHAPKKIADKKRGRGSSRKFTCEVCNEEFILLKTIIEHCVNVHAMNEKTVKPYSCEKCDSRFRSSTNLLNHKLYHDRNRTNICSFCGKSFITKNDLTAHEFTHFNQRNYKCDKCEKAFKTNTNLRTHHLIVHTDPALWKYVCHICSKRFPQKSNHDQHIRRHIGEKNFVCQLCKKSFASKSEMQEHVSYHSNVRAYRCDHCGKEYRKKHTYDVHLAKVHSIGDTKIPVREKKHACHICPSRFYDRLKLARHLCTHSGLKPFPCYACDKKFTDKSYLKNHLKTAHNIVEETMHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -