Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757309.1:193475583-193487367[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0043 4.3 9.7 0.9 14 41 7 31 2 32 0.87

2 12 0.075 75 5.7 2.9 14 28 35 49 27 57 0.77

3 12 0.0008 0.8 12.0 0.5 10 29 60 78 55 85 0.78

4 12 0.27 2.7e+02 3.9 0.2 7 25 87 105 84 115 0.86

5 12 0.078 78 5.7 3.2 13 40 120 149 105 151 0.83

6 12 0.43 4.3e+02 3.3 0.2 18 43 155 177 150 181 0.80

7 12 3.5 3.5e+03 0.4 0.5 3 22 169 188 167 193 0.84

8 12 0.32 3.2e+02 3.7 6.3 17 41 211 232 200 233 0.86

9 12 0.22 2.2e+02 4.2 0.8 18 41 243 263 239 266 0.86

10 12 0.021 21 7.5 1.1 14 31 267 284 262 293 0.75

11 12 0.04 40 6.6 1.4 14 28 295 309 287 314 0.76

12 12 0.00063 0.63 12.4 0.7 10 29 320 338 314 347 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0043	4.3	9.7	0.9	14	41	7	31	2	32	0.87
2	12	0.075	75	5.7	2.9	14	28	35	49	27	57	0.77
3	12	0.0008	0.8	12.0	0.5	10	29	60	78	55	85	0.78
4	12	0.27	2.7e+02	3.9	0.2	7	25	87	105	84	115	0.86
5	12	0.078	78	5.7	3.2	13	40	120	149	105	151	0.83
6	12	0.43	4.3e+02	3.3	0.2	18	43	155	177	150	181	0.80
7	12	3.5	3.5e+03	0.4	0.5	3	22	169	188	167	193	0.84
8	12	0.32	3.2e+02	3.7	6.3	17	41	211	232	200	233	0.86
9	12	0.22	2.2e+02	4.2	0.8	18	41	243	263	239	266	0.86
10	12	0.021	21	7.5	1.1	14	31	267	284	262	293	0.75
11	12	0.04	40	6.6	1.4	14	28	295	309	287	314	0.76
12	12	0.00063	0.63	12.4	0.7	10	29	320	338	314	347	0.79

Sequence Information

Coding Sequence: ATGAAGAGTCACACTGGTGAGAATAGAAACGTATGTGATATATGTGGAAAAGTTGTAACATCGATAGGCAGTTTAAGACATCATATAAGAACCCACACAGGAGAGAAGCCCTTCGAATGTAATTACTGCGAGAAGCGGTTTACCAATCAAAAACTTTTGGTAATGCATGAACGAATCCACACTAAGGAAAAACCATTTAAGTGTAATATATGCGAAAAGGAATTTAGTCAAAAGGCAAGCTTGAATGTACATGTGAGgtTTGGAGAATATAAAATAGATGATGATGTTTTTAAATGTGGCGTATGTGAAAAGAGTCACGCTAGCTTAAAAAAGTTAACAATGCACAAGAGAGTGCACAAAGACAAAAATATTCCATGTGAAATATGCGGCAAAATGTTTAAACATAACTACATGATGCAAACACATAAAAAGACTCAACATTTAAACGAAAGGATCTTTTTTAATTGTGAATTTTGcgataataaatttcaatataaagCGGTATTAAAATCACATATAGATAGTATTCATTTAAACAAAAAGAGATTCTATTGCACAAAATGTCCACGGGGATTTATTCAACGATCTAAATTAGAAAAACACAACAAAGTTGAACACGAAAAGGTTCTTTTTACATGCCACCATTGTAATAAAAGATATAAGGATGAATATTGTTTTCGGTCTCATATAAAAACTCACGACCCTAATTACATAAATGCCGGGTTTGAATGTTCAATATGCTCAAAAGTGTTAAAATTTCGTGAAACACTTCGTGAGCATATGAAGAGTCACACTGGTGAGAATAGATACGTATGTGATATATGTGGAAGAGTTCTGACATCGAAAGGCAGTTTAGGACATCATATAAGAACCCACACGGGAGAGAAGCCCTTCGAATGTAATTACTGCGAGAAGCGCTTTGCCAATCAAAAACTTTTGGCAATGCATGAACGAATACACACTAAGGAAAAACCATTTAAGTGTAATATATGCGAAAAGAATTTTAGTCAAAAGGCAAGCTTGAATGTACATATAAGGTATCATACTGGAGAGAGACCTTACAAGTGTTCCGTTTGTTTTAGGAGGTTTGTTACAAATACTTTACTAAAGGGCCATCATTGTAAAGGACCCCCTAGGGTTGATTAA
Protein Sequence: MKSHTGENRNVCDICGKVVTSIGSLRHHIRTHTGEKPFECNYCEKRFTNQKLLVMHERIHTKEKPFKCNICEKEFSQKASLNVHVRFGEYKIDDDVFKCGVCEKSHASLKKLTMHKRVHKDKNIPCEICGKMFKHNYMMQTHKKTQHLNERIFFNCEFCDNKFQYKAVLKSHIDSIHLNKKRFYCTKCPRGFIQRSKLEKHNKVEHEKVLFTCHHCNKRYKDEYCFRSHIKTHDPNYINAGFECSICSKVLKFRETLREHMKSHTGENRYVCDICGRVLTSKGSLGHHIRTHTGEKPFECNYCEKRFANQKLLAMHERIHTKEKPFKCNICEKNFSQKASLNVHIRYHTGERPYKCSVCFRRFVTNTLLKGHHCKGPPRVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01370064;
90% Identity: iTF_01370064;
80% Identity: iTF_01370064;