Basic Information

Insect: Stenurella melanura
Gene Symbol: X-element\ORF2
Assembly: GCA_963583905.1
Location: OY757315.1:61636393-61643713[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.5e-09 7.2e-07 31.1 0.0 1 34 353 385 353 394 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.5e-09	7.2e-07	31.1	0.0	1	34	353	385	353	394	0.92

Sequence Information

Coding Sequence: ATGGAGACCAAGCTGTATGCTATGGGTATCCGTGGAAACCTACTAAATTGGATTCTGTCATACATGTCTGACAGAAAGATGTTAGTAAGCTGCAACGGAGCAGTTTCTAACACAAGAAATGTTGAAATGGGTGTGCCCCAGGGCTCAGTGCTGGGGCCACTCTTATTTTTGTTATACGTAAACGATTTGCCACAGCACATTACTAAGGGTATGGTGTtgatgtttgctgatgatatcaCAATCACATTGTCGGCTATAACTCCAGAAGAATTAGCATCATACATTGCAATTACTTGTGATGAATTAGAGGCCTGGAGTCAGCGAAACCCTCTAATATTAAATAAAGCAAAAACCGTCTATATTAACTTCCATCTAAGATCCCCTTTACCAGAAAACTTTATATCGGAAAACAACTTAACGCTCTCGCAGACATCGAAGTTCCTAGGTCTATGGTTAGACGATAAACTGAACTGGAGTAGGCACATTGAACATGTTTGTTCTAAGTTAAATTCAGCATTCTATGCTATTATGCAATTGAAATCTTGCTTGAACACTGAAGGAGTCTTAGACATCTACTACGCGTTGGCATTCAGTCATATAGCAAATAATATTGTTTCTTGGGGAGGAGGCAATGATTTGATTAGGGTATTTGTCGCTCAAAAAAGACTAATAAGACTAATTTTCTCCCTACAGCTACTGGAAACCTGTCGAGGAGtgttcagagagaaaaaaatactgACAGTGCCTTCGATATTCATACTGAAGTGCATAATGcacatacacaaaaataaaaatgactttGAAACACTAACCAATAATCATTCTCACAATACCCAACATGGTAACACTCTCTGCATCCCGAGTCATAGAACCACTTCTTATAAACACTCTCCACTCCACAAATGTATTGCTATTTACAATAAGTTACCGAACCACATAAAAGATATCCaaaatgataataaatttaaGAGGGTAACAAAAGATTTCTTAATTGACAATGCTTACTATTCTGTAAAAGATTATTTAAttcaaatggagaGAAAACGAAAGAATTATACCGATGAGTCATTGAAAATTGCTCTAGATGCTATTAAAAATGGAATGAGTATTCGAAAAGCTTCAGACAGGTTTAAAATACCAAAAACTACTTTGATAGATAAAATTCACCACAAATACCCAGCCGGTTCAACTAGCGGCGCGTCAACTGTCCTTACTAAAACTGAGGAAGAAAATATAGTGCAATGGATTTACCATCTAGAGAACGTAGGATTTCCAGTGACAAAAAGCCAGATGTTGGAGAGTGTTGCTAAATTAGTAAAACAACTTTATCGGGAGACACCATTTAAAAACGGCATTCCAGGACGTCACTGGTATGAAAATTTCTTGAAGAGACATCCTGAACTGTCTACCCGAGTATCTCAAAATCTCACTCAGCCACATGCTAACATTACTGAAAAAAGTATTCGGGATTGGTTTTCTAGAGTTCAAAATTATATATCCGAGCACAATTATGACGAGGTATTAAAAGACCCCAGGCGAATCTTCAACTGTGATGAATCAGCTTTCTATTTATCACCTAAAAATAAacaaaaaaaaatatgtcacGAGCATGACAAGAAAAATAATGAGAGTAATACGGAACATGATGAAACTTTAAACGCTAATTTACCTCCGCTAATCGTTAGTGACAATGAATCAAAGCTCTTTGTAGATTTAATTAATGACTCTATTTGGCTAGAAAACCACGATATTTTAGACTTAGAGGTACAACCTGATGGCACAATTGAGATTCCAAGAGTTGCAAATGAGCTGAACACCACCATTAAACAACCTCTTGCTGATATTTCTACGGTTCCTGATGTTCCTATGAAAGCTAATGCTGATCAGCCGGCAAATTACATCTCTACCCCGATTAATGAGAACGGAGATCCATTCTTGCTAAGCCCTCTGAACATCAAATCATTGGAAATGGCCAGATAA
Protein Sequence: METKLYAMGIRGNLLNWILSYMSDRKMLVSCNGAVSNTRNVEMGVPQGSVLGPLLFLLYVNDLPQHITKGMVLMFADDITITLSAITPEELASYIAITCDELEAWSQRNPLILNKAKTVYINFHLRSPLPENFISENNLTLSQTSKFLGLWLDDKLNWSRHIEHVCSKLNSAFYAIMQLKSCLNTEGVLDIYYALAFSHIANNIVSWGGGNDLIRVFVAQKRLIRLIFSLQLLETCRGVFREKKILTVPSIFILKCIMHIHKNKNDFETLTNNHSHNTQHGNTLCIPSHRTTSYKHSPLHKCIAIYNKLPNHIKDIQNDNKFKRVTKDFLIDNAYYSVKDYLIQMERKRKNYTDESLKIALDAIKNGMSIRKASDRFKIPKTTLIDKIHHKYPAGSTSGASTVLTKTEEENIVQWIYHLENVGFPVTKSQMLESVAKLVKQLYRETPFKNGIPGRHWYENFLKRHPELSTRVSQNLTQPHANITEKSIRDWFSRVQNYISEHNYDEVLKDPRRIFNCDESAFYLSPKNKQKKICHEHDKKNNESNTEHDETLNANLPPLIVSDNESKLFVDLINDSIWLENHDILDLEVQPDGTIEIPRVANELNTTIKQPLADISTVPDVPMKANADQPANYISTPINENGDPFLLSPLNIKSLEMAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -