Basic Information

Insect: Stenurella melanura
Gene Symbol: -
Assembly: GCA_963583905.1
Location: OY757315.1:90212268-90214346[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.9e-10 1.6e-07 33.1 0.2 1 41 15 56 15 58 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.9e-10	1.6e-07	33.1	0.2	1	41	15	56	15	58	0.93

Sequence Information

Coding Sequence: ATGCCTCGTAAAAAAAGTCAGGAGAAAAAAATTGGCAAGCACACACATACCCAGATGGAAACAGCGTTACAATTGATTCAAGAAGAAGGTTTGAGTATTCGCCAAGCTGCGAAGGAAACTAACATTGCCTTCACTACATTACAGCGTTATAGGAAGAAACAAAGGACTGCTGAACCTGATGTAAAGTTGCGTTTAGTCCCTAATTATGCGGTAAATAAAGTGTTTACTGATATCCAAGAAGAATCATTGaaagaatattacaaaaaatgtgctCTGCTCTTTTATGGTCTCTCGGCAAAAGATTGTCGCCAAGTGGCCTATCAAATGGCGAagcttaataatattaaaatgccACTCACTTGGGAGGTCAATGAATTAGCAGGCAATGATTGGTTCAGAGGTTTTCGTGAACGTCATCTAGATCTAAGCCTTAGAAAACCGGAGGCTTGCAGTCTCGCCAGAGCAACAGCTTTTAATGAAGAGACTGTCAAGGCATTTTTCAACAATCTGGAAACAGCACTCCGCAGGACCCCAGAATTTGCCAGTGGAACTCGGATTTTTAACCTTGATGAGACCGGGACGACTACGGTGCAAAGGCCTCAGAGAGTTGTTGGACCAAAAGGGCACAAAAACTTGTGTAAGGTCACCAGTGCTGAAAAGGGGACACTGTGCACGACTTGCTGCATAATAAGTGCCGGTGGTCACGCATTGCCCCCTGTCATTATTTTTCCCCGGAAAAATGTAAACGCCAGAATGGCTACTGGTACCCCACCTGGCACATTAACCTTGGCAACACCATCAGGATGGATGAATGGCGAGCTGTTTGTGAGAGTGATGGAGCATTTCATCAAGCATAGTCACAGCACTCCGGCCACTCCCAGCATTATAATCATGGACAACCATGAGTCACACCTCAGTATTGAGGCGCTTGATTTAGCAAAGAAATCTGGGGTAACCGTCCTTACTCTTCACCCTCATACATCTGCAAGAATGCAGCCTTTAGATGTTGGGATTTTTGGGCCGTTCAAGTGTTATTATCACAATGCAATGGATTCTTGGCTAATGCGCCATCCAGGTTGCCCAGTTACTATTTACGATGTTGGCGAACTAATTGGAATAGCCTTTACAAAGTCAATGACTATTTCAAACATAACTAATGCTTTTAAGAAAACTGGAATATTCCCATTTGATAAGGATGTATTCTCCAGTAATGATTTCTTACCCAGCACAGTGACAGATCGTCCCAACTCAGCATGCTTGACCCCAGATCAGTATGTAAAGCAGTCAGTAAATTCTGACCAAACGTCAGTCAATGTGTTAACAGCAACCGTTCACCTGAATGTGTCACCTCCATCACCTGAATTGAACAAAGACCTATCGTTTATAGAGCCAGATCCCATCACTGGTAATATTGTAGCACACGAGACTGTTGCTGGACCATCCGGCTGtaacaataattttatatcaCCTGAACAGTTCAGACCGCCACTGAAAGCCGCACCTAGAACTAAGAAGAGAAAACCAAGAAAGCTGGGAAGAAGCATGATTGCCACAGACACTCcggaaaaaaatgaaatagcACTGGCTAAGGAAGcaactaaaaaaagaaaaaaagctaAAGAAAGGCAGGTAAAGCGTCAAGTTTTACAAAGCGATTCCGAAGAAGACTGCGATGAAATATTGTGTCAAGACACTGACGACAGTGGGGACTGGTTTGAAGAAGACGAAGTGGAAAACGATGAAAACCTGTTGACTGAGGAGGGTTTGCAAAATTCTTTACCACGAGTCGCAGAACAAGGAGAATATGTGCTTGTTTTATTCTGCACAAAAAAACAAAGAGTTTTTTACGTTGCCAAAGTTTTAGACACTAGAAACGATGATATGGAATATAATGTCAGTTTCCTGAGACTAAAAATGAAAGAGCAACAACAATTTTGTATGCCTGATGTGCCTGACATATCATTTGTGAAAGAACAGGATGTAAAATTTATTCTTCCAAATCCAACAGTTAGCGGTACAGCCAGGAGACAATCACATTTTAAGTTTGCACTTGATTTTTCTCTCTTGAATAtgtgttga
Protein Sequence: MPRKKSQEKKIGKHTHTQMETALQLIQEEGLSIRQAAKETNIAFTTLQRYRKKQRTAEPDVKLRLVPNYAVNKVFTDIQEESLKEYYKKCALLFYGLSAKDCRQVAYQMAKLNNIKMPLTWEVNELAGNDWFRGFRERHLDLSLRKPEACSLARATAFNEETVKAFFNNLETALRRTPEFASGTRIFNLDETGTTTVQRPQRVVGPKGHKNLCKVTSAEKGTLCTTCCIISAGGHALPPVIIFPRKNVNARMATGTPPGTLTLATPSGWMNGELFVRVMEHFIKHSHSTPATPSIIIMDNHESHLSIEALDLAKKSGVTVLTLHPHTSARMQPLDVGIFGPFKCYYHNAMDSWLMRHPGCPVTIYDVGELIGIAFTKSMTISNITNAFKKTGIFPFDKDVFSSNDFLPSTVTDRPNSACLTPDQYVKQSVNSDQTSVNVLTATVHLNVSPPSPELNKDLSFIEPDPITGNIVAHETVAGPSGCNNNFISPEQFRPPLKAAPRTKKRKPRKLGRSMIATDTPEKNEIALAKEATKKRKKAKERQVKRQVLQSDSEEDCDEILCQDTDDSGDWFEEDEVENDENLLTEEGLQNSLPRVAEQGEYVLVLFCTKKQRVFYVAKVLDTRNDDMEYNVSFLRLKMKEQQQFCMPDVPDISFVKEQDVKFILPNPTVSGTARRQSHFKFALDFSLLNMC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -