Smel078201.1
Basic Information
- Insect
- Stenurella melanura
- Gene Symbol
- Kdm5_1
- Assembly
- GCA_963583905.1
- Location
- OY757318.1:4688759-4698469[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-24 2.8e-20 74.7 0.0 2 89 117 200 116 200 0.94
Sequence Information
- Coding Sequence
- ATGACCACAAAGGTAGAGAAACAGATGAATGGCAATAATGGTATCAAGTGCCATCCTGGAAGTTCAAAAAGTTCGCCAGTAAAATGCAATGACCACTATTCTCAATATAAAGAAGAAACATTTCAATTTGAAGTACCTCCAGAGGCCCCAGTTTTTTACCCTACAGAAGAAGAATTTCAAGATCCTTTAGCCTACATAGCTAAAATCAGACCTATAGCCGAAAATACAGGAATTTGTAAAATAAAACCACCTGCAcaTTGGCAACCACCGTTTGCTGTAGATGTAGATAAATTAAGATTTACCCCCAGAATACAGAGACTAAACGAGTTAGAGGCAAAAACTCGTGTGAAATTAAACTTCTTAGACCAAATTGCCAAATTTTGGGAACTGCAAGGGTCATCCCTGAAAATTCCTATGGTAGAACGAAGAGCTTTGGACTTATATACATTACATAGAGTTGTACAAATAGAAGgGGGCTTCGATTGTGCTACGAAAGATAGGAAATGGTCAAGAATCTCCCAAAGAATGGGGTATCAAATTGGAAAAAGTATTGGAACTATATTAAAAACGCATTATGAAAGATTGCTTTATCCATTTGATGTATTCAAACAAGGGAAGGCTGTCAACATAaaaattgaaCATAGTTCGGAAGACACTGAAAAGGCTGATAAGGACTATAAACCTCATGGTATTGTAAGCCGAATGCAAATCAAACCGCCTCCTGAGAAAAATGCAAGGCGCTCCaaacgttttgaaaatgatgAAAGCAAGAATGACAATTTGGGACTTAGGATAAAAGAAGAAAAAGCTGATGATGATAAAGATGGAAATAAGGAACTTAGACGGCTGCAATTTTATGGCGCAGGCCCAAAAATGGCTGGATATGATGATAAAAAAGAAGCCAAACCTAGAACCAAGAATATCAAATATGATTTCGATCCATTAGCCAAGTATGTTTGCCATAATTGCAACCGTGGCGATGCAGAAGAATACATGCTATTATGCGATGGTTGCGACGATAGTTATCATACATTTTGCCTTATGCCACCTCTGTCAGAAATCCCAAAAGGCGATTGGCGTTGCCCAAAATGTGTAGCCGAGGAAGTGTCCAAGCCTATGGAAGCTTTTGGTTTTGAACAAGCTCAACGTGAATATACCCTTCAACAATTTGGAGAAATGGCTGATCAGTTCAAATCTGAATACTTCAATATGCCTGTACATaTGGTTCCAACAGGTACCGTTGAGAGGGAATTTTGGAGGATCGTGTCTTCTATAGATGAAGATGTTACAGTGGAGTATGGAGCAGATTTACATACCATGGACCATGGCTCGGGTTTTCCAACAAAATCTTCCAGTAATCTTTTTCCCGGAGATAAGGAATATGCCGAATCCAGCTGGAATTTGAACAACTTGCCTGTATTAGAAGGCTCCGTCCTCGGGTACATTAATGCTGATATATCAGGAATGAAGTTGGTCATTGACGAACAACAGAAGGAGCAGAAAACTAATTCCAATGTTCACATTAGGGCTTCCTAG
- Protein Sequence
- MTTKVEKQMNGNNGIKCHPGSSKSSPVKCNDHYSQYKEETFQFEVPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPAHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFDCATKDRKWSRISQRMGYQIGKSIGTILKTHYERLLYPFDVFKQGKAVNIKIEHSSEDTEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFENDESKNDNLGLRIKEEKADDDKDGNKELRRLQFYGAGPKMAGYDDKKEAKPRTKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKLVIDEQQKEQKTNSNVHIRAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106971;
- 90% Identity
- -
- 80% Identity
- -