Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963583905.1
Location
OY757310.1:58094396-58127590[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-27 3.6e-23 84.0 0.0 1 89 295 380 295 380 0.95

Sequence Information

Coding Sequence
atgCAAGTAGAGGATCCCCCCTTTTTGTCTGTTGGTACAGCAGTTAGTGCAAAATATAAGGGAGCCTTTTGTGAAGCTAAAGTAAGCAAAGTTGAACATAATGTGAGATGCAAGGTAACTTATAAAATGGGCTTGGGAAATGCTACACTTGCTGATGAACAAATAAAAGGAACTCTGCGTGTTGGCCAGCTGGTTCAGGCCGTACATCCAGATAAGAAAGAGTTAATTGATGCCACAATAACAAAAATCCAAGATTGCAGTTATTATACTGTCGtgtTTGATGATGGTGATATAACAACATTAAGAAGAACAGCGCTATGTTTAAAAAGTGGAAGACATTTCAATGAAAGTGAAACCTTGGATCAGTTACCTTTAACACATCCTGAACATTTTGGAAATCCAGTAGTAGGTGGAAGAAGAGGTAGACGAAATAGGCAGctaaaaGAGGACAGTAGTGATGGAGAGGTCGAAGAAGAGAATGAACCAGACTTAGAAGCATATATGATAGATGTAGGTCGTGTAGTTGGAATTGAATCGATGGAAAAGAAACGCAGCAAGGAGATATGGTTTCCTGGTCTTGTGGTTATTCCTTCAGCACAACCAACTGTTCGAATTAATGTAAAAGACGAGTACTTAATAAGATCTTTTGTGGACGGAAGATATTATACAGTACCTAAGAAAGAAGTGTTGACATTGACCACAGACACAGTAGAAAAGATCTCGAACTCTGGTTTTGGTGAAGCTTTGCACAAAGCTGATAAATTTGTGCGTAGCAATGAACTTCCTGCGTTTTGGGAGAAAAGTTCCTTATTTAACTCAAAGTCTACCGAAAGTGAAAGCGATGAAAATTTCACAGATAGTTCCGATGATGAACCGTGTGAGGAGAAAGATAGGTTTGTGGCCCAGTTATATAAATTTATGGACGAGGCGGGCACACCTTTAAATAAGACACCCACTATTGCAGCTAGAGACATAGACCTTCACCGTTTATTTCGAGTAGTGCAAAAATTGGGAGGGTGTAATAGGGTTACAAACCAAAACAAATGGAGATCGGTCACCTCCAGACTACGTCTCCCAAACAACCAAAACACATTCAATCAAGTAAAATCTGTGTATAAAAAGTGTTTGTCTAGTTATGAGACTTTCTATAGAACTTTGGGAGTAACAATGTTAAATCATACTCGATCTTCCAAAAAAAACCGAGGTAGAAGTCTCATTAGGGATAAAGATAGAAGTACACCGATAAATAGTCCTAAACCAGAGAAGGAGGATGACGTTTCCGAGAAAGTTGAAGAGAAAAAGGAAGTTCCACCGCAGACTCCTGATAATCCCAAATCAAAAAAGAAGCAAGAAGTTAAAgtgaaagaagaaaaaaagaagatAATACATATTGTAGAAATAAGCGACACAAATAGTAGTGATACAACCGATCAATCAGAGCCTGTAGCTACAACCTCAAAGGATACTGGTAGACCTAAGAGAGAAAGAGCTGAAAGTAAATTGGGTaaggagaaaaaaattaaggctGCAACAGGTGAGAAAGTTAAGGCTCTTGTTGAGAAGTTCGAGGAACAGCAGAAGAAGGAGGAAGATGAGAAAGGACAACAAACTCGATCAAAGTCACTTTCTAAATCCAAGGAAGTTCCTCCTCCCGTCCCAGAGAAGAAAGCAGAGAGCAAAGTATTGGTAAGAGAATTAAAAGTGACGACAAATAAACCTAATACTAAGAAAATGCCTGAAGAAGAAAAGAGAAGGGGTAGAAAGCGAACTATTGATGATAAGACTTCTAATGCAGAGAGCAATACAACTGAACCTGCACTAATAAATGTTAATATTGGCGATAAACTGAAAGTTTATTATGGCCCCACTCATGAATCCAAGGTGACATATGAGGCGAAAGTTATAGAAATTGATAAGGATCAAAGTGGACCTGTTTACTTGGTACATTATACTGGATGGAATACAAGatATGATGAGTGGATCCAACCTCAGAGAGTTGCTGAAAATCTTAGTGCAACCACAAAGGCTAAAAGATTAAAACAAAGCATTGCATCCGCTAATAAAACAAATACTGGCAAAGTGGCTACTAAACGAGGTAGGGGAATATCAATCACAGGACGTACTACACTTACAGAAGCTCCCAGATCCACCACACCCTCAAGTGTTACATCTTCAAGTAGCAGAACTAAAAGTCCTGCGACACCAGCCACAAGATCTACCAGATTGACGAGACAAGATTCAACGCGACGGACTAGAAGGATATCCGCTCAAACAGATGCATCCAATCATTCTGAGTCTGATAGTGATGCTTCAGGTAGTGAATCTGAGCTTGCCCGTACTCGAAGCGGAGGAAAAAGTGAAGAGCCAGAGGTTAAAACTTATAAGAGGAAAGTCGGAAAACCTCCAATGACAcCCAAAATTGAGAGACGTAAAGAAAAAGAAGATGATGATACAGAAAAAGAAGAGGAATGCGAGAAACCAAGAAGAAGTAGAAAAATTAAGAGGTCCCCAGAAAAATCAACCGAGGAGAGTGAAGATGAAACAAATCCTCCCAAAGGAAGAGATTTTGATTTAAATCAAATCAGATCAGAACTCAAAGGATTCACTAAAGCTATTAAGGTGCCTTCAATTGAGACAATTGAAAAGGAAGTAGTTTCATCCTCTGATGATTCCACGAATCCACCACCTCCAGAAAAATTAAGTGCCGAAGAAGAGCCAGAAGAAGATAAACAAGAAAAACCATTAGAGAAATCTTCAAGTTCAGAAGATATCTACGAGTTTAAAGAACCAGAACCGTTTGAATTTGAGAGTAGACCTAAACTTGCAGACGATAAAACTGTCAAGAAACGCTTGGTATCTAGAATTTTTGAAGATATAGATAAATCTGTGCCACCGAAAAAGAAAACTATGAAGTCTCCTCCAAGTAAATCAGATAAACAAGAAAGTCCTATTTCAGAGAAGAAGGTGTTCAAGAGAACCTCATTGAGAAAGCACGAACTTGAAGATGATTCTGATGAAGAAGAATGTGTTGTCCAACACATGTCTCCTCCAAAAGAAGAAGATCCTTTTGACAAACTTGTGGAGTCGCCTAGTTTTAATTTGGTCAAAACCTCCTTGGAGAAAGTGGTTGATAATAAGACAAAGGTCGTTAAGAATTTGTTAGAAGAACCGCTGAGTCTTTTCCGCGAACTTCCCGAAACTGTAGATGACTACAGTAGGGATATGGAGCTTTCAGATTGCGAATCTCAAACTCAAATTTTCACTCGGTCTGAAGAATTATTTTCTGACACTTTCTCCAAATCATCTCCAGATCATAATCCTTTAGATTTAGAATTTTCGTCAGGTAAAACCGATGAATGTAAGATGAAAGACAGCGATGATGATGACATGATCAGGGCTCAAATTCAAAGAGTCATTGCTCAAAGTTCTTCTACCGATGATGATAGTAATGACGCCTTATTAATTACCCCTCCTACGACTAGCTATCAAGTCAAAAAGCGGGATATTCCAATTCCCTTAACTAGCATTCTAGGTATCAGTACTACGACTCAAATTATAGAGATGCCAAAAGTGGAGGAAGAAGCTAAAGAAGCACCTCCTCTAGCGCCTCTAATAGAAGTAGAAGAGAAGAAGGAGCTGCCTCCACCTCCTATTGAAAAATCTGCATTTTCTATTGTAAAACAAACTATATCTCCTGCTCTTCAGGAGACGGACAGTTCATTGCTAGAATCGATAGTTTCTCAACCAACAGTGTCGCTGAATGTGAAACTTGAGGAAACGGCAAAAGAACTTAGTAATGTCAAAACAGGGACGAAAATTGCAGATTCGATACTTCAAAAATTCAATtctatcaaaaataaaattgaaggGAAATCACCAAAAAGTGAGACAGCTTCTGAAACAATCGATCAAAATAGGGATGTAATACcggaatttaaatttgagttgcCGAAAGAGGAAGTCAAACCCACGTCGGTGGAAGTAAAACCTAAGTCTACTGAGGTCAAACCTAAATGTGGTGAAACGAAACAAAAAGCCGTGGAAAGTCCACCAAAACTATTGGAGGTTAAACCTAAATCCATAGATCAAATTCCCAAGCTGGAAATGAAAAAACCGGTGTCTCCAACTCCTAAGTTTGAGTCTTCAATGGAACCTAAAAAGCGCAGAAAAGTTGTCAGCAGGGCTTTTATTGAAGAATCTGACTCGGACAGTAGTGACTCTGAACAATTGATTATTGCAAGGTCTGATGAAGACTCACAAACTATCTCGTTAGACAATAAGTTGCAAGCAGAATCTAAAGAAAGCGATAACAGTAATATTTTCACACAGAATTTAACCACAGATGATTCACAGTCGCAAGAGGAACGCAACTTCAATTTTGATATAAAGGAAGAAGAGAAATCTCCTGAGCCTCTCTCACTACCCTCTCCCACAAAAGAAGAAGAAGGTGGTGAAACAGAAATCAAATCTGATAATGTAGAAGAGCAAGAGGCTGCTAAAGAAGAGGAGCCTGATTCACACCTACACTCCTTACTCTTATGTGAAGAAGAAATCCCTAGGAGTCCTGCGCCTGCATCAGAACCTATCAATCCGGTGGAAGTTAAACCGAACAAATCTGTACTTGAAATGCCGTTCGCTAGTGCGCCAGGTACAAGTAATAGCAAGAGTATGTTACATTTGGAACATAAGAAAGTCCATCCTCCACCTTTGGATGTACCAGTAGAAAGAGAAAATCGAGCAGATGTCACAGCTGTTTTAGATCATAGTCCTCCAACTACTCCAGAAAGTACAATTAGTAATCCTAGCGGtgATAATGGTGATTTATCTCCAAATACCGCTGATAATGAGAGTTGTAAATCTGTTGATGTTGAACCTGAATATCCAAGGCAGAGAAGAAATTCCTCCATGAAAGTGTCACCATACAGCGAGGaagGGATTGTGGAAGAACGTTTCTAA
Protein Sequence
MQVEDPPFLSVGTAVSAKYKGAFCEAKVSKVEHNVRCKVTYKMGLGNATLADEQIKGTLRVGQLVQAVHPDKKELIDATITKIQDCSYYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRNRQLKEDSSDGEVEEENEPDLEAYMIDVGRVVGIESMEKKRSKEIWFPGLVVIPSAQPTVRINVKDEYLIRSFVDGRYYTVPKKEVLTLTTDTVEKISNSGFGEALHKADKFVRSNELPAFWEKSSLFNSKSTESESDENFTDSSDDEPCEEKDRFVAQLYKFMDEAGTPLNKTPTIAARDIDLHRLFRVVQKLGGCNRVTNQNKWRSVTSRLRLPNNQNTFNQVKSVYKKCLSSYETFYRTLGVTMLNHTRSSKKNRGRSLIRDKDRSTPINSPKPEKEDDVSEKVEEKKEVPPQTPDNPKSKKKQEVKVKEEKKKIIHIVEISDTNSSDTTDQSEPVATTSKDTGRPKRERAESKLGKEKKIKAATGEKVKALVEKFEEQQKKEEDEKGQQTRSKSLSKSKEVPPPVPEKKAESKVLVRELKVTTNKPNTKKMPEEEKRRGRKRTIDDKTSNAESNTTEPALINVNIGDKLKVYYGPTHESKVTYEAKVIEIDKDQSGPVYLVHYTGWNTRYDEWIQPQRVAENLSATTKAKRLKQSIASANKTNTGKVATKRGRGISITGRTTLTEAPRSTTPSSVTSSSSRTKSPATPATRSTRLTRQDSTRRTRRISAQTDASNHSESDSDASGSESELARTRSGGKSEEPEVKTYKRKVGKPPMTPKIERRKEKEDDDTEKEEECEKPRRSRKIKRSPEKSTEESEDETNPPKGRDFDLNQIRSELKGFTKAIKVPSIETIEKEVVSSSDDSTNPPPPEKLSAEEEPEEDKQEKPLEKSSSSEDIYEFKEPEPFEFESRPKLADDKTVKKRLVSRIFEDIDKSVPPKKKTMKSPPSKSDKQESPISEKKVFKRTSLRKHELEDDSDEEECVVQHMSPPKEEDPFDKLVESPSFNLVKTSLEKVVDNKTKVVKNLLEEPLSLFRELPETVDDYSRDMELSDCESQTQIFTRSEELFSDTFSKSSPDHNPLDLEFSSGKTDECKMKDSDDDDMIRAQIQRVIAQSSSTDDDSNDALLITPPTTSYQVKKRDIPIPLTSILGISTTTQIIEMPKVEEEAKEAPPLAPLIEVEEKKELPPPPIEKSAFSIVKQTISPALQETDSSLLESIVSQPTVSLNVKLEETAKELSNVKTGTKIADSILQKFNSIKNKIEGKSPKSETASETIDQNRDVIPEFKFELPKEEVKPTSVEVKPKSTEVKPKCGETKQKAVESPPKLLEVKPKSIDQIPKLEMKKPVSPTPKFESSMEPKKRRKVVSRAFIEESDSDSSDSEQLIIARSDEDSQTISLDNKLQAESKESDNSNIFTQNLTTDDSQSQEERNFNFDIKEEEKSPEPLSLPSPTKEEEGGETEIKSDNVEEQEAAKEEEPDSHLHSLLLCEEEIPRSPAPASEPINPVEVKPNKSVLEMPFASAPGTSNSKSMLHLEHKKVHPPPLDVPVERENRADVTAVLDHSPPTTPESTISNPSGDNGDLSPNTADNESCKSVDVEPEYPRQRRNSSMKVSPYSEEGIVEERF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00885684; iTF_01289528;
90% Identity
-
80% Identity
-