Sbip024395.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- nfxl1
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000886.1:1122111-1124588[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 4.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.065 1.5e+03 0.6 0.4 4 10 169 175 168 175 0.96 3 20 3.1e-07 0.007 17.6 15.9 3 19 186 202 185 202 0.95 4 20 0.3 6.8e+03 -1.5 1.3 6 10 227 231 226 231 0.90 5 20 8.8e-07 0.02 16.2 13.6 3 19 239 255 237 255 0.91 6 20 0.32 7.1e+03 -1.6 1.2 5 10 279 284 279 284 0.94 7 20 2e-10 4.5e-06 27.8 14.1 1 19 290 308 290 308 0.99 8 20 3.6e-06 0.082 14.2 19.0 3 19 345 361 337 361 0.86 9 20 1.1 2.5e+04 -3.3 0.5 7 11 365 369 365 369 0.87 10 20 7.2e-07 0.016 16.5 17.2 1 18 395 412 395 413 0.97 11 20 7.6e-09 0.00017 22.8 14.6 1 19 422 440 422 440 0.98 12 20 0.0016 35 5.8 8.8 10 19 489 498 486 498 0.91 13 20 0.00012 2.7 9.4 5.8 1 12 508 518 508 518 0.96 14 20 0.34 7.5e+03 -1.6 2.9 14 18 547 551 547 552 0.84 15 20 0.67 1.5e+04 -2.6 1.1 8 12 568 572 567 572 0.83 16 20 3e-06 0.068 14.5 4.1 1 11 588 598 588 599 0.97 17 20 0.75 1.7e+04 -2.8 1.6 15 18 613 616 612 617 0.83 18 20 0.00027 6.1 8.3 14.8 4 18 630 645 628 646 0.85 19 20 2 4.5e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 20 1e-06 0.023 16.0 13.4 1 16 687 701 687 707 0.91
Sequence Information
- Coding Sequence
- ATGTCTCGTAAATACCGCGATGCGGCTGCCAAAATGCAGCAAAATGTTCAAAAACATTTGAAGGAAATGAAAGAATTATCTTCGTCTGAAGATGAGGAAGCTTTTGAATCCAGTGTCTTGGATGGCGTTTTTCAAAGTTATTGGAATGGTGGTGGAGATTCAAAGCTACTCAATCGTACCAAAAACCTTTTAGAAGAAGCGTTGAGTGGAAGATCAGTAACATGCTTAATATGCATTGGATCCATAAAACGTTCTCATCCTATTTGGGCCTGTGATAACTGCTATTGCTATTTCCATATTACTTGCATACAGAAATGGGCCAATGACAGCATTAGCTTACGTTCTGAACAGTCCAATCTACCAATATCAGTAGTTAAACCACAAACCATTGAGTGGTGCTGTCCAAAGTGTAGATATTCATATGCTAAAGATGAGATACCTCGTAAATATATATGTTTTTGTGGGAAAACAAGCGATCCTCAGTTGCATCCATGGCTCTTGCCACATTCTTGTGGAGAAGTTTGTGAAAAGAGACTGTCTAGTGGAAATGACTGCAAACATAAGTGTCTGCTACTTTGCCACCCCGGGCCATGCCCCCCTTGCCCACAAACTGTGCAAGGCATGTGTTACTGTGGAAAAGAAAGCAAGCGAGTTAGATGCAGTGCGGCCAGTTGGTCATGCCAACAGCTTTGCAAGAAGTTTTTGGCTTGTAAATCACATAAATGTGAATTAACTTGTCATGAAGGAGAATGTCCACAATGTACTCATACCAGTGTTCAAAGATGTCAATGTGGTGCAGCTGAATCTAAAAGACCATGTAATAATGTTTTATGGCGGTGTGAAAAGCTGTGTAACAAACCATATGCATGTGGTTATCATAACTGTGAAAAAGTATGCCACTCTGGCGACTGTGGTCCATGCCCAAAATCTGGTCTAATGTCATGTCCCTGTGGGGCCAGTGAAAAGTTTGTCCAGTGCCCAGATACTATGGAAACATGTTTAGGAACTTGTGGTAAAAGCCACGATGTATGTGAACACAGTTGTCCAGAAAAATGTCACCGTGGTCCATGCCCTCCATGTCAAGTTCTAGTTCAAAAGAAATGCCATTGTTCTACACACACAAGATCACTACCCTGCAGCAAAGAATTCAAATGTGATACAAAATGTAGAGGCATGCGAGCATGTGGTAAGCACGCTTGCACTAGAAAATGCTGCAATGGTAATTGTCCACCATGTGAAAAAGTATGTGACAAGTCTTTACAATGTGGGCGCCATAAATGCACTATGGTTTGTCATCATGGGCCCTGCTACCCTTGCTCAAGGGAATCCAAAGTTTCTTGTAGATGTAAAGAGACTTATGTAACAGTACCATGTGGAAGAGAAAAATCTGTTAAGCCCCCAAAATGTTCATTACCATGTAAAATCAAATATAAATGCGGGCATAGTGATGAAAATAAGCACCATTGTCATTTTGGTGATTGTCCGCCCTGCAAGGCTATATGCAATAAATTATACAAAACTTGTGGACATAACTGTAACGCAGTATGCCATGAATATGTTGCTGTAGTATTTAAGCAGGCTGCAAAACCTGCTACTCCCTGGGAAATAGAACCTCCTAAAACTAAAATAATGACACTAGCATGCCCCCCATGTGAGATACCAGTTATGCTAGTTTGTTTCGGAGAACATGAGACAGAGCATCAGCTATGTCATAGTGCTAAAAGGCGCTCTTGTGGTAGAGAATGTGGGAAGCCATTAGCTTGTGGCAACCATACCTGTGCATTACTTTGTCACCTAAACATTGCAGATCCTTTGTATCCAGCAGTGCCCGTTTCTTGTAAGCCTTGCGATGAAGAATGTCTTAAAGTCCGTCCAGGGAAATGTACTCATCAATGTTCTCTAAAAACTTGTCATCCAGGAGAGTGTCCACCCTGTAATGCTCTAGAAAGGATGCCATGCCATTGTGGTATTACAGAAATTTATTTAAGATGTAAAGAGATATCAACCACCTCTGATGAGATTTTTTCATGTAAGCAGCAGTGTCCAAAAAATCTGAAATGTGGCCATAGATGCAAGGCAATTTGTCATCCTGGTCCATGTGGACAGGGTATGGATTGTACTAAAAAAACAAAAGTGGTTTGTTCCTGTGGCAACCTGAAGAGGGAGGTTCCGTGTAATGTAGCAAAAAGAGGAGAATCCAAACCAATGTGTGACGAATCATGTGAAAAAAAGAAAATTGCAACTCAGAAAGAAATTGAAAAGGAACAACTTAGATTAAAACAACTTGAAGAAGAGAGGAATAAAAAGGAGCTTGCAGAATATGAATGGAAACTGAGTGGCAAAAAGAAAAAGTACAGGGAGAAGAAAGTTGTAGTTAGTAGAGATGATAGAATGTGGTTTAAAAAATACTGGATTCCTATTGTTTCTATTTCTGTAGTAATTATTGCGGCTGTGTATTTTACTTTTTGTATTAACTAG
- Protein Sequence
- MSRKYRDAAAKMQQNVQKHLKEMKELSSSEDEEAFESSVLDGVFQSYWNGGGDSKLLNRTKNLLEEALSGRSVTCLICIGSIKRSHPIWACDNCYCYFHITCIQKWANDSISLRSEQSNLPISVVKPQTIEWCCPKCRYSYAKDEIPRKYICFCGKTSDPQLHPWLLPHSCGEVCEKRLSSGNDCKHKCLLLCHPGPCPPCPQTVQGMCYCGKESKRVRCSAASWSCQQLCKKFLACKSHKCELTCHEGECPQCTHTSVQRCQCGAAESKRPCNNVLWRCEKLCNKPYACGYHNCEKVCHSGDCGPCPKSGLMSCPCGASEKFVQCPDTMETCLGTCGKSHDVCEHSCPEKCHRGPCPPCQVLVQKKCHCSTHTRSLPCSKEFKCDTKCRGMRACGKHACTRKCCNGNCPPCEKVCDKSLQCGRHKCTMVCHHGPCYPCSRESKVSCRCKETYVTVPCGREKSVKPPKCSLPCKIKYKCGHSDENKHHCHFGDCPPCKAICNKLYKTCGHNCNAVCHEYVAVVFKQAAKPATPWEIEPPKTKIMTLACPPCEIPVMLVCFGEHETEHQLCHSAKRRSCGRECGKPLACGNHTCALLCHLNIADPLYPAVPVSCKPCDEECLKVRPGKCTHQCSLKTCHPGECPPCNALERMPCHCGITEIYLRCKEISTTSDEIFSCKQQCPKNLKCGHRCKAICHPGPCGQGMDCTKKTKVVCSCGNLKREVPCNVAKRGESKPMCDESCEKKKIATQKEIEKEQLRLKQLEEERNKKELAEYEWKLSGKKKKYREKKVVVSRDDRMWFKKYWIPIVSISVVIIAAVYFTFCIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -