Basic Information

Insect: Stenoptilia bipunctidactyla
Gene Symbol: -
Assembly: GCA_944452705.1
Location: CALYCB010000712.1:2095451-2142372[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.027 3.8 9.4 0.2 1 23 223 246 223 246 0.91

2 10 6.1 8.6e+02 2.0 0.2 8 23 259 274 254 274 0.80

3 10 0.012 1.7 10.5 3.1 1 23 339 362 339 362 0.96

4 10 7.9e-05 0.011 17.4 3.4 2 23 367 388 366 388 0.96

5 10 0.00069 0.097 14.4 2.0 2 23 396 416 396 416 0.97

6 10 2.7e-05 0.0038 18.9 1.3 1 21 422 442 422 447 0.95

7 10 0.00056 0.079 14.7 0.4 1 23 455 478 455 478 0.94

8 10 0.13 18 7.3 0.1 1 12 484 495 484 500 0.85

9 10 0.00049 0.068 14.9 2.1 1 23 532 554 532 554 0.95

10 10 0.0001 0.015 17.0 2.9 2 23 561 583 560 583 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.027	3.8	9.4	0.2	1	23	223	246	223	246	0.91
2	10	6.1	8.6e+02	2.0	0.2	8	23	259	274	254	274	0.80
3	10	0.012	1.7	10.5	3.1	1	23	339	362	339	362	0.96
4	10	7.9e-05	0.011	17.4	3.4	2	23	367	388	366	388	0.96
5	10	0.00069	0.097	14.4	2.0	2	23	396	416	396	416	0.97
6	10	2.7e-05	0.0038	18.9	1.3	1	21	422	442	422	447	0.95
7	10	0.00056	0.079	14.7	0.4	1	23	455	478	455	478	0.94
8	10	0.13	18	7.3	0.1	1	12	484	495	484	500	0.85
9	10	0.00049	0.068	14.9	2.1	1	23	532	554	532	554	0.95
10	10	0.0001	0.015	17.0	2.9	2	23	561	583	560	583	0.96

Sequence Information

Coding Sequence: ATGGTCCAACTGGTATGCTGGGAATGTCTCGCGTTGATGAAGAAGTTCCTGCGGTTCAAGCGGCAGGTGCAGAGTGCACAGGAACATCTCCGAGTTTTGGCGTTGAGTCAGGAGACAGTGGACCACACATATCTCTCCCAGTCCCTCTCAAGTCTGACCAGCAACATGAAGTCCGACTACGATAATATATACTTCGACTATTCTCTCGGAACCATTGAGGGTAGTGAGCAGCAAGTGTGGACAGAAGAGTACATAGTAGCCAGGTCCGGAGATGTCAAGAATGAGAGCTTCGACGTGGCACATGTTGACAGAGATAATGTGGGATTGGAGCTGGGGCAGCATATTTTAGAAGTGCCAGAAATAGTCTTAGAGAACCCGGTGACAGGTGTCATGTCGCACATAGTTGTCAACACTGACGCGCTTGTGACGTCCGGACACGCGGCTTACACTGACGCACAGACTGTTAAGACGGAGATCGTTAATATCGGCAGCATACCGAACTCAGACACAACAGAACAAGTGGTTCTATACCCCGCGACTATTGAGAAGCCCGAGGCTGACAAAAGCGACGCGAAGTGTCCCTACTTCACTGTCATGATGACTGAGGACGAACTTCAGGCTTACAGGGAGGAATGCAAACAGAAGCTGCCATACGCGAGCGCCTATTACAAGTGTGAGCTGTGCGTCATAGGATTCTACCAGCAGAGTCAAGTGGAAGACCATTTCGTGTCGGAACATAAGCCGAGCCCCGGCAAGTCTCGCTGCACAGTTTGCTACAGCTACATATCGAACGCCTCACTAGCGCGGCATGTGTCGGCGCACTACACGCGCTATGTGTGCAAGTTGTGTTCGCACTCGGAGACGGCGCAGCGGCTCATTGTACAACACACGCAAAGTCATATCGGTAGTCAGCCCAAAAGAAGAAAAAAGAAGGAGTTAGAGAAGCAGAAGCCGTCAAGCCCGCCTAAACCCGGAGACCTTAGAAAACTGTTATCAAAGACCACTATTGAAGGATACAAGTGCCTCGAGTGCGATATGTTCTTTAAAAACTCGCGAGCCAGACAGACGCACGTGGCTCGCTGCCACCGAGAAGGCTTACAGTGCGATCATTGCAAAAAGCGCTTCGTCAACAGAACCACGCTTGTCACGCATTTGAAACTCCACGAAGGTCCACCTCCCAGAGAAGAGTGCCCAATATGCCACAAGATGGTTCGAACCAGCCAACTCAAGTACCACATCCGAAGACATCAGAACCAAACTAAGTATACCTGTACCGACTGCAAAAAGGTGTTCTCTCATTTAGCTACTTACCAGGCACATTTGAAATACGCGAGAGCGCATGCTTCCGATAATGTTTTCAAATTCCCGTGTCCAATGTGCAATAAGGGCTACCCCAGTAAAGAACAGATGCAGGACCATTTCAACTACAATCATCTCGGAAAAACTACCCACAAGTGCCCCATCTGTGATAAGGTAACCGTGGATGTAGAACAGAATAGAATATCATTTATTCGTCCTATAGCCTCCCGAAAAAACGTGGAGCGTCACATGGCGCGAGTTCACGAAGTTCACAAGAAAGAGAAGCCGAAAACACACGTGTGCGTGCAGTGCGGGAAAGCCTTCTGCGACAAGAAGTCTATAACGCAACACCTTGTGATCCACTCGGGCGAGCGACCTTTGTCGTGCGAAGTGTGCCATCAGACTTTCAAGCAGAAAGCCTCTTTGTATACACACAGAAAAAGAGTACACAAGTTATTCCCGCAGAAGAAACACGTTGAGTTCATGCCTAAACCCGATACCGCCTCGTAG
Protein Sequence: MVQLVCWECLALMKKFLRFKRQVQSAQEHLRVLALSQETVDHTYLSQSLSSLTSNMKSDYDNIYFDYSLGTIEGSEQQVWTEEYIVARSGDVKNESFDVAHVDRDNVGLELGQHILEVPEIVLENPVTGVMSHIVVNTDALVTSGHAAYTDAQTVKTEIVNIGSIPNSDTTEQVVLYPATIEKPEADKSDAKCPYFTVMMTEDELQAYREECKQKLPYASAYYKCELCVIGFYQQSQVEDHFVSEHKPSPGKSRCTVCYSYISNASLARHVSAHYTRYVCKLCSHSETAQRLIVQHTQSHIGSQPKRRKKKELEKQKPSSPPKPGDLRKLLSKTTIEGYKCLECDMFFKNSRARQTHVARCHREGLQCDHCKKRFVNRTTLVTHLKLHEGPPPREECPICHKMVRTSQLKYHIRRHQNQTKYTCTDCKKVFSHLATYQAHLKYARAHASDNVFKFPCPMCNKGYPSKEQMQDHFNYNHLGKTTHKCPICDKVTVDVEQNRISFIRPIASRKNVERHMARVHEVHKKEKPKTHVCVQCGKAFCDKKSITQHLVIHSGERPLSCEVCHQTFKQKASLYTHRKRVHKLFPQKKHVEFMPKPDTAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -