Sbip039704.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- Zfy2
- Assembly
- GCA_944452705.1
- Location
- CALYCB010001220.1:132261-144663[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.2e-05 0.0017 20.0 0.2 1 23 923 945 923 945 0.96 2 12 6.9 9.7e+02 1.8 1.0 5 17 1045 1057 1044 1063 0.86 3 12 0.0007 0.098 14.4 2.0 1 23 1073 1096 1073 1096 0.96 4 12 0.00044 0.062 15.0 1.2 1 23 1100 1122 1100 1122 0.98 5 12 0.00094 0.13 14.0 0.6 2 23 1144 1166 1143 1166 0.94 6 12 0.0051 0.72 11.7 0.2 1 23 1170 1193 1170 1193 0.97 7 12 0.023 3.2 9.7 0.2 2 23 1216 1238 1215 1238 0.93 8 12 1.1e-05 0.0016 20.0 2.6 1 23 1248 1270 1248 1271 0.96 9 12 0.0046 0.64 11.9 1.9 2 23 1287 1308 1286 1308 0.96 10 12 0.014 1.9 10.3 0.6 1 23 1314 1336 1314 1336 0.96 11 12 1.7 2.4e+02 3.8 2.7 1 20 1342 1361 1342 1366 0.91 12 12 0.0035 0.48 12.2 0.2 2 23 1415 1436 1414 1436 0.97
Sequence Information
- Coding Sequence
- ATGTCATCCAATAATATCTATGATGATGGATTGGCAAACTGCTTACAAGAGTCAAATGAAAGCATATTGCCTGAGAATCAAAATCACACAGTAGAAATCAAAATTGAGAATGATTCAAGTGTATTTGAGAATATACAAATAGAAATAAAACGAGAGTTTGACCCTGAGTACTCTGAGTTCTCATCAGATAATACAAAAGAATCAGGAATTGATGAAAACGGTTTAGTTGATGTGAACAGTGTAAAGAGTGATGGAACGTTTTCTCAAATAAAGACGGAAACGAAAAGTGGTGATTCTCCGTTGGAACAGAATGAGCTTCAAAACAATGATGATGTAGAAAGTATGGACAGCAGTGAAGCGGTGGCACTGCATAATGTGGAGGCATGTCTGCAAGAAGAACTGGATATCAAGACGGAACTGGACAATGTGTATGAGATGGCAGATTTGAGAAAAAAAGCTGCTAAAAGGGAATTCACTGAAAGCTCTGAAGAAAATGACCAGCATTTTAACAATTGGTTGGAGGAATTAGAAGAAGAAAAGGAATTTAGTGATGTCGACGGTGAAGATAAAGGTTTTTTTTATGAAAACGAAGATTTGAAAGAGTCTTTCTACTACAGTGTTGATGAAACTGATGAATCGGAAGAAGATATCGCAGAACCAATGGTAAAAAGCACTGACACTCACTATATTGGTAGAAACGGATACTCATGGTCAAAAACTGTTATAGAGCATAAAGCTAACAAACCATCTCCCAGCATAGAAATATCCCAACTAACTGCATATGAAAACAAGTCGATAAGAGAGTGTTTCTTTGACAGCAGTGATGATGAATTTGATGATGAAACTGATGGTGAAAGTGATCTTATATTTGATGATGAAACTGATGAATCGGAAGAAGATATCACAGAAACTAATGAAGATATAGAAGCAATGGCAAAAAGCACTGACACACAGTATACTGGTAAAAACATGGTTGTTGAGCAAACAACTAGCAAACCATCTCCCAACATTGAAATATCCCAACCAACTGCAAATCATGAAGAAGATATCACAGAAAATAATGAAGATATAGAACCAATTTCAAAAAGCACTGACACAAACTATATTGGTAGAAACACCGTTATCGAGCAAACAACTAGTAAACCGTCTCCCAGCATTGAAATATACGAACCAACTGCAAATCCCGTATTCAAAGATATTATAGACATCTGGTCATCAATATTCGACACTGAAATGGTGATAACAATAGTCAACCACACAAATGAAAAACTTCGCTATTTCCGCGAACAATTTGGCAGCTCAAAAGAAGAATTAAAAGACACTAATGAAATCGAAATGAAAAGCTTCATAGGCCTTCTGTACTACAACGCATTGTTCAGAACAAATGGACATGATGCGAATGAATTATTTATTACGGACGGCTTTGGACACGCTATCTTCCCTTGCGTGATGTGTAAACATCGATTTGTTACCTTAACCCGTTGTATTAGATTTGATAATTGCGCCGACAGGCAGCAACGTTTGCAGGTTGATGCCTTTGCAGCAGTTTCGTGGATTTTTGGAAAGTTTCAGACGAATTGCCAGAAAAACTATACTCTTAGTGCAAACACATGCATAGGCACAATGTTTATACCGTTTACAGGAAACTGTAAATTAAAAATTCATTTACGAGCAAAAAAGCCTAGGAGATTTGGTCTCAAATTGGAAATTTTATTCGATGCTCAAACTTTATATGTACATAATGCATATATTAATAGTGGTGAAATTCGTGAAGGCGAAAGTTTATCCGGAAAAAAGATTCAATCAGTTCTTCAGTTGATTAAACCTATTGAAAATACAGATAGAACTGTTACAGCTGGTGATTCATTTAGTTCAGTTGAACTTTTACAAATCCTGCGTTCAAAAGGATTAACCTTTCTCGGAAAGTTAAAACAAAAAAAGCGTGAAATCCCACATGAATTTCTACCGAACAAAATAAGGGAGAAAGGGAGCTGCCTCTACGGTTTTACAAAGGATTGTACTTTACTCTCCTATGTTCCAAAGAAGAAAAAAGTCGATATTTTGCTTTCATCCTTACACCTCGCACCGAGTATGGATCGAAATACCAACGAACCTACTATGGTTGCGAGATACAATAAAATAAATTTTCTAGAGTATTCGATCAAGGAAATTTGTGGCGAATACACATGCAATCGAAATACGCCTCGCTGGCCCAATGCCGTATTCCATACGATCCTAGATCTAGCTTGTTTCAACGCTTCGATCTTGTACGTAACCCAAGGAAACTCATCACGAAACTCGTCGGACAATCGAAGATATAAACTCGTGTTATCTTTGGCAAGAGATTTAGTTCTTCCTAGTTTACAACAGAGAGTTTATACGTACCGACTACCGAGGGAGCTGAGGGAACTCAAAGAAGATGCAGATAAAGTCAACATCAAAGAAGAAGTGGAGGCGGCATCAGAGACTCAGTTAATAAACAATCTGATTAAAACCACCTCCACAGTGACCGCTGCTGGCCGCGAGATGGACCCGGCGCAGCCCTCCAACACTCTCGTCATGGAAATACTTCCATTGCCCATCGGTGATAACGACGTTCACGACAAACTAAACAACCCTGAGGAAATACTGCCGACGATCAACAGTGATGACGAATACGGTGACCATTTCCAACTCAACTCTATCACTGGAAATGTACTCTCTCTAGAACAAGAAGCGTACGGCCTACTTAAAGCCAAAGTAGACAAAACACAACTAGGGGCCGAACATCCTTGTCCGGAATGCGGGAAGATCTACAGATTAAAGAGCGGCCTTAAAAGACACATTGGTGTGCACCGAAGTATAGAAGCCCGCGCCATGGGGATACTCAAAGGAAAATATACGAGAAAATTAAACCAAGCTCGACCGCAACCTGTCATCAACGAATTGACCGAGAAAAAGTTAAGTACTAAAAAAGTTAGGAGAGAGTGTAAATACATACAAATAAAAAACGCGGGTGGTGAAGATAAAGTTAAAGTTGAGAAGAAGACGAAAAAGAAGAAAGAAGACAAAGTTACTACGCCGACGACTAAAACTGAGACTGATAAAGAAATCAAATCAGAGTCAGATGTTAAAAAAGAGGGCTACGCGTGTACTTGTGGCAAAGTATTCCAGAGGCGGAGTCGACTGGAGACTTGCCTCCGCTCTCACACGGAATACGCCGATTCGGAAGCGTGCTACGCTTGTGTCACCTGCTCCAAACAATTCAAAGATAAGGACTCCCTCTCAATGCATCGAAAGAAACAACATAGAAAACGGTTTCCATGTAAATTCTGCCCCACCGACTACAACACGAGGAAAGAACTATTCAGACACTTGCAGATACATCAAAAGGTACAACTGATGGAATACAAAGTCATATCAGAAGCGATGGAAGGAAAACAAAAACTCAAATGCTTTATGTGCACAAAGTCTTTCGTAGAACTATCGGAGCTGAAAACTCATGTTATGGAGAATCACAAGGAACCGTTCGCTTGCAAGTTCTGCAAGGAAGTATTTCCGAAAATAATAGACTTTGCCAACCACATGAAAATGGCACATTCCGAAGTGGAAGGCCAGACTGTGTTGGATGTTCTTGAAGCGTTCTCTAAACTGGTTCAAGCGTGGAAGTGCGAAGATTGTGGCTTACAGTTTCATGAAGCAGACAAACTCGCGCTTCACCAGATCGAGCAACACAACCCAGACTTAAAAGTAGAACCTCAGTTCCAATGTTCGGATTGTAGACGTGTGTTCATCAGTCAAAAAGCGTTAACGTCCCATAGAAGAGTGCACCACAGCGTTGAAAGTACAGAAGAAGTGGAGGTAGAACCACAGGGCGTGATGTGTCTTGAGTGTCGCAAAATGTGCAAAGATATGACCGCCCTCACGTCGCATATGCGTCTTCACTCGCCTGATAGAAAGTATCCATGCAAGTTCTGTGATTTTCGGTTCGCAACTCCAGAAAAACGGAAAACTCACGCTGAAGTTCACACCGGAGACATGAAGTACGTCTGTTTCATATGCGAATACCAATGCACGTCTGAAAACCGTCTCAAACAGCATAAAGTGTCTCTAAAACATTTGAACATGAAAGAGTTTCTGTTGACTGGAAAACCTTTGATAGAAGAAGAGACGACTTCAAAAGAGAAGATTAAAGATACCTCTAAAAAGAAAGACTCAAGGAAAAGAAAGAGTAGTTCTACAATAAGCGAAGAGAGGCTAATCTCCTGCGATGTTTGTGGTGAGCATTTTGCAGACGAGCCTAATATGTTGGAGCACAAACAGACGCATCCGTTTATAGAATTCCCGAACGAAGACACGCCCACTCGGATATTCTTCAAGTGA
- Protein Sequence
- MSSNNIYDDGLANCLQESNESILPENQNHTVEIKIENDSSVFENIQIEIKREFDPEYSEFSSDNTKESGIDENGLVDVNSVKSDGTFSQIKTETKSGDSPLEQNELQNNDDVESMDSSEAVALHNVEACLQEELDIKTELDNVYEMADLRKKAAKREFTESSEENDQHFNNWLEELEEEKEFSDVDGEDKGFFYENEDLKESFYYSVDETDESEEDIAEPMVKSTDTHYIGRNGYSWSKTVIEHKANKPSPSIEISQLTAYENKSIRECFFDSSDDEFDDETDGESDLIFDDETDESEEDITETNEDIEAMAKSTDTQYTGKNMVVEQTTSKPSPNIEISQPTANHEEDITENNEDIEPISKSTDTNYIGRNTVIEQTTSKPSPSIEIYEPTANPVFKDIIDIWSSIFDTEMVITIVNHTNEKLRYFREQFGSSKEELKDTNEIEMKSFIGLLYYNALFRTNGHDANELFITDGFGHAIFPCVMCKHRFVTLTRCIRFDNCADRQQRLQVDAFAAVSWIFGKFQTNCQKNYTLSANTCIGTMFIPFTGNCKLKIHLRAKKPRRFGLKLEILFDAQTLYVHNAYINSGEIREGESLSGKKIQSVLQLIKPIENTDRTVTAGDSFSSVELLQILRSKGLTFLGKLKQKKREIPHEFLPNKIREKGSCLYGFTKDCTLLSYVPKKKKVDILLSSLHLAPSMDRNTNEPTMVARYNKINFLEYSIKEICGEYTCNRNTPRWPNAVFHTILDLACFNASILYVTQGNSSRNSSDNRRYKLVLSLARDLVLPSLQQRVYTYRLPRELRELKEDADKVNIKEEVEAASETQLINNLIKTTSTVTAAGREMDPAQPSNTLVMEILPLPIGDNDVHDKLNNPEEILPTINSDDEYGDHFQLNSITGNVLSLEQEAYGLLKAKVDKTQLGAEHPCPECGKIYRLKSGLKRHIGVHRSIEARAMGILKGKYTRKLNQARPQPVINELTEKKLSTKKVRRECKYIQIKNAGGEDKVKVEKKTKKKKEDKVTTPTTKTETDKEIKSESDVKKEGYACTCGKVFQRRSRLETCLRSHTEYADSEACYACVTCSKQFKDKDSLSMHRKKQHRKRFPCKFCPTDYNTRKELFRHLQIHQKVQLMEYKVISEAMEGKQKLKCFMCTKSFVELSELKTHVMENHKEPFACKFCKEVFPKIIDFANHMKMAHSEVEGQTVLDVLEAFSKLVQAWKCEDCGLQFHEADKLALHQIEQHNPDLKVEPQFQCSDCRRVFISQKALTSHRRVHHSVESTEEVEVEPQGVMCLECRKMCKDMTALTSHMRLHSPDRKYPCKFCDFRFATPEKRKTHAEVHTGDMKYVCFICEYQCTSENRLKQHKVSLKHLNMKEFLLTGKPLIEEETTSKEKIKDTSKKKDSRKRKSSSTISEERLISCDVCGEHFADEPNMLEHKQTHPFIEFPNEDTPTRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -