Basic Information

Insect: Stenoptilia bipunctidactyla
Gene Symbol: prg
Assembly: GCA_944452705.1
Location: CALYCB010001125.1:1143398-1145195[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.31 44 6.1 1.8 1 23 176 199 176 199 0.87

2 10 0.01 1.4 10.7 0.6 1 23 205 228 205 228 0.97

3 10 2.8e-05 0.0039 18.8 2.7 1 23 234 256 234 256 0.94

4 10 3.6e-07 5.1e-05 24.7 4.9 1 23 262 284 262 284 0.99

5 10 0.0038 0.54 12.1 0.2 1 23 290 312 290 312 0.96

6 10 0.00069 0.097 14.4 0.4 1 23 318 340 318 340 0.94

7 10 0.0023 0.32 12.8 0.4 2 23 428 450 427 450 0.93

8 10 5.3e-05 0.0074 17.9 1.5 1 23 456 478 456 478 0.96

9 10 2.2e-06 0.0003 22.3 2.3 1 23 484 506 484 506 0.97

10 10 0.0014 0.2 13.5 0.0 3 23 515 535 513 535 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.31	44	6.1	1.8	1	23	176	199	176	199	0.87
2	10	0.01	1.4	10.7	0.6	1	23	205	228	205	228	0.97
3	10	2.8e-05	0.0039	18.8	2.7	1	23	234	256	234	256	0.94
4	10	3.6e-07	5.1e-05	24.7	4.9	1	23	262	284	262	284	0.99
5	10	0.0038	0.54	12.1	0.2	1	23	290	312	290	312	0.96
6	10	0.00069	0.097	14.4	0.4	1	23	318	340	318	340	0.94
7	10	0.0023	0.32	12.8	0.4	2	23	428	450	427	450	0.93
8	10	5.3e-05	0.0074	17.9	1.5	1	23	456	478	456	478	0.96
9	10	2.2e-06	0.0003	22.3	2.3	1	23	484	506	484	506	0.97
10	10	0.0014	0.2	13.5	0.0	3	23	515	535	513	535	0.92

Sequence Information

Coding Sequence: ATGGAAGATTCATATATTATTGCAAACTTTCACACACTTTGTAGGTTCTGTCTCCATAAAAGTACACTAGCTGTATCGGTTTTCGGGTCAGTTCCAGATAGTGACGCGAATGTGCCCCTTATGTCGAAAATTAGTGAATGTTTTGATCTTCAGATGGATCCCAACGACGGGCTACCAGGCAAAATGTGCTACAAGTGCTTATTTAAGCTTGATAAATGCTCACAGTTCAGAATTCAATGTGTTCAAAGTGAAAGAAGATTGAGGCAGATAGCTCAAAGAGCTAGTGAGCTGGACACATCAAATTCTTCAGAACTAAGTAGTAATTATAATTACAAGACTTCTCAGGAATCCGTTTTGCAAAAGGCAGATGAATACATTGTAGAAGATAGTGTTGTGATGGTAGTAGACCCTAGTATGGACTATGATTCATCTGAAGAATCTGAACCCACTGCTGAAAAAGAAGCAGTAGAAAGAGATAATACTCCTGAAAATGAACCTGTAGCAGAAAATTATCTAAAAAATGTGTTCCTATGTCAATACTGTGATCAAGCATTTGTGTCTGATGATAAGCGGAAAGAACATGAGAAAGCATGCCATGACCCAAATATGCCATATAAATGTTTTGAGTGTAGTCTGGTGTTTGCAGAGAGAACCCAAAATATTCAGCATTTAAAACAAGTTCATGGTAATGACAAGCCTTACCTCTGTAGAGAATGTGATAAGTGCTTTGGCCGCAGATCTGACCTGAAAAAGCATTCTATAGTTCACACAGGCATCAGGCCTTACCAATGTCATTACTGCTTAAAAAGTTTCTCTCGAAATACAAATTTAAGCAAACATTTAAGAATACACTCTGGCCATAAGCCACATGTTTGTTTGCTGTGCCCAAGAAGTTTTGTTGCAAAAGTTGATTTAGATAAACATGCTCAAGTTCACTCCAGAGTTAAGCCCTTTGCTTGTAAAAGCTGTCCACTTACTTTTGCAAGGAGAGACAAACTAGCAAAACATGAAGTAAAGCATAAAGTAAGTAGTACTAAACCAAACAAAGATGATATGGTTGTGAATGTGAATCCTTTTAGGAACCTTATGACCTCACCGCCTTCAATGCATCGAGATAATCTTACTGGTGAGTATGAATTACCAAGGGTACCGGAACACATTTTTGCTGAAAATAGTTTTGTTAATCAAGTTAACAAAAACCCTTCCACATCAGGAAAACCAAACCCAAATTCCCCACCTAAACCAAAGCCTATCTCTAATAAGAATAAACCAAAGAATATAAAATGCCATCAATGTCCTAAAAGACTGTCTTCTTTAGATGCCTATAAAGCACATGTTTCCCTTGCACACATTGGCTCCAGAGTTTTCCAATGTAAGATATGCTTTAAAAAGTTTGCGAGAAAGAGGGAACTGGATCGTCATTCTGCTATACACTCTGAAATTAAGCCATTTGCATGCAGTCAATGTGATAAGAAGTTTACTAGAAAAGACAAATTGACCAAGCATGAAGAAACACATGAATGCTTGGTCGTGAACATGCCTTGTATAGAATGTGGGGCTACATTCGAAAAGAAAGCTGATCTCGTGGCCCACATTAAATCACATTTCACAGATGACTTTGATGAAAAAATTGCAATTGAAAACTCTGATATTAAGAAGGAAGATGATGCTGATTTCCCACTCGATGAAAACTTTTATGATTTGGAAACCTGA
Protein Sequence: MEDSYIIANFHTLCRFCLHKSTLAVSVFGSVPDSDANVPLMSKISECFDLQMDPNDGLPGKMCYKCLFKLDKCSQFRIQCVQSERRLRQIAQRASELDTSNSSELSSNYNYKTSQESVLQKADEYIVEDSVVMVVDPSMDYDSSEESEPTAEKEAVERDNTPENEPVAENYLKNVFLCQYCDQAFVSDDKRKEHEKACHDPNMPYKCFECSLVFAERTQNIQHLKQVHGNDKPYLCRECDKCFGRRSDLKKHSIVHTGIRPYQCHYCLKSFSRNTNLSKHLRIHSGHKPHVCLLCPRSFVAKVDLDKHAQVHSRVKPFACKSCPLTFARRDKLAKHEVKHKVSSTKPNKDDMVVNVNPFRNLMTSPPSMHRDNLTGEYELPRVPEHIFAENSFVNQVNKNPSTSGKPNPNSPPKPKPISNKNKPKNIKCHQCPKRLSSLDAYKAHVSLAHIGSRVFQCKICFKKFARKRELDRHSAIHSEIKPFACSQCDKKFTRKDKLTKHEETHECLVVNMPCIECGATFEKKADLVAHIKSHFTDDFDEKIAIENSDIKKEDDADFPLDENFYDLET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -