Basic Information

Insect: Stenoptilia bipunctidactyla
Gene Symbol: -
Assembly: GCA_944452705.1
Location: CALYCB010000663.1:765767-767380[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.036 5.1 9.0 0.1 2 23 11 33 10 33 0.94

2 15 0.011 1.6 10.6 0.3 2 23 54 76 53 76 0.94

3 15 9.7e-05 0.014 17.1 2.1 2 23 82 104 81 104 0.95

4 15 0.01 1.4 10.8 1.4 1 23 109 132 109 132 0.96

5 15 5.3 7.5e+02 2.2 0.1 2 23 135 157 134 157 0.90

6 15 0.00098 0.14 14.0 1.2 2 21 164 183 163 184 0.94

7 15 0.016 2.2 10.2 0.6 1 23 241 264 241 264 0.89

8 15 4.4 6.2e+02 2.5 0.0 3 23 293 314 291 314 0.90

9 15 0.054 7.6 8.5 0.1 3 23 338 360 336 360 0.95

10 15 0.00028 0.039 15.7 0.4 3 20 367 384 365 388 0.90

11 15 0.016 2.2 10.2 0.5 1 23 393 416 393 416 0.97

12 15 0.00024 0.034 15.9 0.3 2 23 422 444 421 444 0.92

13 15 2.2e-05 0.003 19.2 4.9 1 23 448 471 448 471 0.98

14 15 0.00065 0.091 14.5 0.4 2 23 478 499 477 499 0.96

15 15 0.0031 0.44 12.4 3.3 1 23 505 527 505 527 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.036	5.1	9.0	0.1	2	23	11	33	10	33	0.94
2	15	0.011	1.6	10.6	0.3	2	23	54	76	53	76	0.94
3	15	9.7e-05	0.014	17.1	2.1	2	23	82	104	81	104	0.95
4	15	0.01	1.4	10.8	1.4	1	23	109	132	109	132	0.96
5	15	5.3	7.5e+02	2.2	0.1	2	23	135	157	134	157	0.90
6	15	0.00098	0.14	14.0	1.2	2	21	164	183	163	184	0.94
7	15	0.016	2.2	10.2	0.6	1	23	241	264	241	264	0.89
8	15	4.4	6.2e+02	2.5	0.0	3	23	293	314	291	314	0.90
9	15	0.054	7.6	8.5	0.1	3	23	338	360	336	360	0.95
10	15	0.00028	0.039	15.7	0.4	3	20	367	384	365	388	0.90
11	15	0.016	2.2	10.2	0.5	1	23	393	416	393	416	0.97
12	15	0.00024	0.034	15.9	0.3	2	23	422	444	421	444	0.92
13	15	2.2e-05	0.003	19.2	4.9	1	23	448	471	448	471	0.98
14	15	0.00065	0.091	14.5	0.4	2	23	478	499	477	499	0.96
15	15	0.0031	0.44	12.4	3.3	1	23	505	527	505	527	0.97

Sequence Information

Coding Sequence: ATGGAAATCAAAATTGACGTCTCGAATATAAGCTGTAATAAATGTAGTATGAACTTCGCTAATTTTGATGAAATCATTTCGCATCTTATAGTCGAACACAAGTTGCCTTACGATACAGATATAGATATGGCCGTTGAGGAGTATAAACTCATAGATATTAGCTGTTTAGTGTGTAACGAGAAATTTACGTATTTCGGATATTTAGTTTCTCATGTTAATAATAATCATCCCAAAAACTGTCTTATATGTGATAAATGCGATCAGAAATTTAATAAAAAACGCGATTTGTTTTCGCACATGAAAAATTACCACCGAGAAGGAGGTTACAAATGCGAATTTTGCCCGCAAAGCTTCGGATCGCTTAACATTTTGCGTAAACATAGAAATAACAAGCATTTGACTCGATGTTCTATTTGTCTCCTTAATCTTCCTTCGGCTGCTTTGAAGCAGAAACATATAGAGCTTGAACACCCAGATAATGGGTCTTTACAATGTGATATTTGTTCCAAAGAATTTCATACCAAACAGGGCCTTAAAATGCATCTCAAAAAGTGCAAGGGTGATGAGGTTTACGACGTACCAGTTAAAAACGAGGACATTGATATGGACACAACTGGAGAAGATGAAATTAAAAGACCAAGCGTTAAACAGATTCGGGAGAATATTGTCACTGTCATCAATATGTCAACGGCGATACCGTTTAACTTTTTCAAAAATAAATTCAATTGCTTCTACTGCTCAAAAGACTTTCAGGATTCGGACGCTATGAGAGAGCACACGGTATTGGAACATCCAGTTTGCGATGTCAAACAGAAATGCATCAGAAAATGCAGGGAATCAGTTTCGTGCGTTAAAATCGATATTTCGACTCTCGCTTGTAAGATATGTTTCGAATCTATGCCCTCCTTAGATGTCTTACTCGATCATTTAATTGTTAAACACGACGCAAAATATGACAAATCGATTACTACTTGCCTTCAACCTTATAGACTTATCAAAGACCACATGGCTTGTCCAAATTGCCCTGAGGAAGTATTTCGATTTTTCGGAACCTTACTCAAACATATAAACAAAAACCACACGAACAACAATATTATTTGTGTTTACTGCGGTGAAACGTTTCGTAGAGACCAAAATTTGCGAGTCCACATTTGGAGACATCACAGAGATGGTAGGTTTAAATGTAACCTATGCGGAGCTGAATGTAATATTCCTTCGAGGCTTTATATGCACATGGCGAAAGTGCACGGTGTCAAAGCGTCAAAATGTCCGAAATGTCCGGAAACATTTGCAACTCAGTATTTGCGTCAAAAGCATCTCATTGATGTCCATGATTCTGGCCACAAATGCACGTATTGTGGGAAGTTATTTACGAGGAACTCCTTCATGCGTGACCATATTAGACGAACGCATTTGAAAGAGAAGAATGTGGAATGCGCTATATGCAGTATGAAGTTTTTCAATAATATTCTCCTAAGACGGCATATGGTTAAGCATAGCGGTGAGAAGAATTTTCACTGTGATATTTGTGGCGAAAGATTCTTTTGGAGAAAAAGCCTCAGGACGCATATGACCAGACATAGTAAGCAGATCAGCAATGCTATACCGGTATGA
Protein Sequence: MEIKIDVSNISCNKCSMNFANFDEIISHLIVEHKLPYDTDIDMAVEEYKLIDISCLVCNEKFTYFGYLVSHVNNNHPKNCLICDKCDQKFNKKRDLFSHMKNYHREGGYKCEFCPQSFGSLNILRKHRNNKHLTRCSICLLNLPSAALKQKHIELEHPDNGSLQCDICSKEFHTKQGLKMHLKKCKGDEVYDVPVKNEDIDMDTTGEDEIKRPSVKQIRENIVTVINMSTAIPFNFFKNKFNCFYCSKDFQDSDAMREHTVLEHPVCDVKQKCIRKCRESVSCVKIDISTLACKICFESMPSLDVLLDHLIVKHDAKYDKSITTCLQPYRLIKDHMACPNCPEEVFRFFGTLLKHINKNHTNNNIICVYCGETFRRDQNLRVHIWRHHRDGRFKCNLCGAECNIPSRLYMHMAKVHGVKASKCPKCPETFATQYLRQKHLIDVHDSGHKCTYCGKLFTRNSFMRDHIRRTHLKEKNVECAICSMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMTRHSKQISNAIPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -