Basic Information

Transcription Factor Domain

TF Family: CSRNP_N
Domain: CSRNP_N domain
PFAM: PF16019
TF Group: Unclassified Structure
Description: This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.0012 26 5.9 0.0 2 42 18 58 17 62 0.90

2 4 0.001 23 6.1 0.1 2 42 60 100 58 106 0.90

3 4 0.0011 25 6.0 0.0 2 42 102 142 100 146 0.90

4 4 0.0011 24 6.1 0.1 2 31 144 173 142 178 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.0012	26	5.9	0.0	2	42	18	58	17	62	0.90
2	4	0.001	23	6.1	0.1	2	42	60	100	58	106	0.90
3	4	0.0011	25	6.0	0.0	2	42	102	142	100	146	0.90
4	4	0.0011	24	6.1	0.1	2	31	144	173	142	178	0.92

Coding Sequence: ATGCACGGTTACTGGAGGAATGGACGCGATGAACAACATTCAACAAAGAGTAACAAGCAGTCTCAAAAGTTTAATATTGTTATAGTGTTTCATTTTGTAGCTCCACAAAAAATAACTGCGGTGTGGATACACGGTTACTGGAGGAATGGACGCGATGAACAACATTCAACAAAGAGTAACAAGCAGTCTCAAAAGTTTAATATTGTTATAGTGTTTCATTTTGTAGCTCCACAAAAAATAACTGCGGTGTGGATACACGGTTACTGGAGGAATGGACGCGATGAACAACATTCAACAAAGAGTAACAAGCAGTCTCAAAAGTTTAATATTGTTATAGTGTTTCATTTTGTAGCTCCACAAAAAATAACTGCGGTGTGGATACACGGTTACTGGAGGAATGGACGCGATGAACAACATTCAACAAAGAGTAACAAGCAGTCTCAAAATTTTAATATTGTTATAGTATTCAATTTTGTTGCTCCACAAAAAATAACTGCGGTGTGGATGCATGGGGGTGCTGTAAAATTTTGTAAACATTACAAATAA
Protein Sequence: MHGYWRNGRDEQHSTKSNKQSQKFNIVIVFHFVAPQKITAVWIHGYWRNGRDEQHSTKSNKQSQKFNIVIVFHFVAPQKITAVWIHGYWRNGRDEQHSTKSNKQSQKFNIVIVFHFVAPQKITAVWIHGYWRNGRDEQHSTKSNKQSQNFNIVIVFNFVAPQKITAVWMHGGAVKFCKHYK

Sequence clustering based on sequence similarity using MMseqs2