Basic Information

Gene Symbol
-
Assembly
GCA_944452705.1
Location
CALYCB010001157.1:317713-319848[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.56 1.4e+03 0.8 0.0 3 19 158 174 156 177 0.86
2 6 3.2 7.9e+03 -1.6 0.0 22 33 231 242 228 245 0.87
3 6 3.2e-08 8e-05 24.0 0.1 1 46 262 309 262 309 0.92
4 6 1.4e-08 3.5e-05 25.1 0.2 3 44 317 362 315 364 0.93
5 6 9.6e-06 0.024 16.0 0.0 2 41 369 408 368 412 0.94
6 6 2.6e-08 6.4e-05 24.3 0.1 3 45 420 466 418 467 0.89

Sequence Information

Coding Sequence
ATGGATTGGTATAGTGATAGTGATGGTGATGAAGAGTCAGAAATTAAGGATTTAGAACAGCTAAATGCAGTGCTTACTGACGAACCGTATATAAGCGAAATTACACCTCAATTACAACGCTCGGCAGCAACAAGTACAATCAGTAGTTCTTCTGTAACAACAGAGGAGTCTAGAATAGAGACTGCATTAGCCTTAAACAAACTAACCGATGAAAAATTGTGTCGCCTAGAGAAAAACTTGGTTCTGCGCTTACTTGAATGCCGGGAAAAACTAAAGATTGTTCAAAAAAATAGTGCTCTTGATCGTAAAAAGTCTTCGAAATCTATGTCGAAATATGAACACTTCAGGTATGTGCACTGTGGCATGCCTTATTTTAAAGATAAAGATATGTTTCCCGGCCCAGACAATGAAGATACTATTCTAATACGTAATTTAAACATGCTTAACTTTTCCTTATTGCCACTAAATTTAAATTGGACTATAAAAGAAAAAAAACAATTTGTTAGTGTCATATTAAAGTTGTCTAAGGATATGAAAATAAAAGAACTAGAATCTAAAGCTGCTGCATTAAAACGAGCCCACCTCACTGAAGATACCGATAGTGCAGAGTTAAAACAAATTAAGAATGAAATAGCAAATGTTTCTAAAAAAAGTTTGTCAGAAGTTGTATTGCCAATAAATGAAGAATATGATTGGGATTTAATTTCAAATGCCTTGAATTCTAAGCACAATGGATTAGAACACATGTCATTCTGGAAATTGTTTTTACATCCAGCAATTAACAAATCTGAGTGGAGTGATGATGAAATTAAAAGACTATTTACTCTCGCAAAACAAAACAACAATCAAAATTGGGACAAAATTGCTATAGATTTGAATACATCTAGATCTGGTTTGCAATGTTTTATGAAATTCCGGTCTCATTTAGTTACTCGGGAAAATTCCGCAAAGTGGACAAGAGAAGAGGAAGAATATCTTAGAAGAGTAATCGATTTTTATAGAGAAGATGGGCATATTCCATGGAATAAAGTTAGTGCTGTTGTTCAAAACCGAACCAAAAACCAAATATACACTAAATACCTAAGATTATATTCAAAGCGCACTGGAAGATTTCTTCCTGAGGAAGATGCTGTGCTACTCATTTGTGCTGATCTTTTTGGGAAAGATTATAATAAAATGACACAATACATACCAGGACGGTCTGCATTGCAACTTCGGGTGAGACACAATGTTTTAATATATCCTCCTAACACTGTAACATGGACATGTGAAGAGGATAATAAACTGCTTAAATTAATAGAGAATTCTAAGTGTAAAGAATCTCACAGTTTCTCCCAAATAGTGAAGTATTTTGAAGGTAAGACAAGAGTGCAATTGCGAACAAGATACATAACACTTAAAACTTGGATGAGAAGAAATCCTAAGAATGATATTACAATGGCACCACGTCGACGTGCCCGTGATTTATATAATAACTGTGACCCATCCAATTTGAGTGATGCAATTGAATGTTTGAGAAAAAGACTAGAAATAGAGGTAGAAAATAAAAAATCATCAGTTGTTTCCGCATACTCACCAGAAGTTGAAATAGATAGAGCAATTTCGGATACATTAATCAAAACAAGATTATACAAATTACCCAAGCGTGATAACTTTACTCCAGACAACTTTCATTTAGTTGATGCATCTGTTTCCAAAAAAAATGGCAATATCCATAATATCAAATGTATTCTTATCCTTTTATATGCTAAGTTAAATAAGAGCAAATTTCCAGAAACTGAACACTTTAAAACATACCCAGGGTTGATCGAAGAGTCTAAAGCTAGGAAATCTTATTCTAGAATAGCTCAAGTTGCCAAAGCTGCTGACATATGGGGTGAAAATCCAGTTCCTCTGCATGATTATGTAATACCTCCTAACTATGACACTATGATTGCCTGCAGAAAGTTGTTCTCATTATTGAAATATGACCCATCGTTAAAAAAAAAAGTTATGTATGTAGGTCACTTTGTTAAAAATAAACCTGAAGTTACCAATCAATATACCATACTACTTTATAGACTTAAGATCCTATTTTCTTGGGTTTTTAAAATTTGTAAAGTAGATCCGAATGCTCTAAACTACTCAGGATATTGA
Protein Sequence
MDWYSDSDGDEESEIKDLEQLNAVLTDEPYISEITPQLQRSAATSTISSSSVTTEESRIETALALNKLTDEKLCRLEKNLVLRLLECREKLKIVQKNSALDRKKSSKSMSKYEHFRYVHCGMPYFKDKDMFPGPDNEDTILIRNLNMLNFSLLPLNLNWTIKEKKQFVSVILKLSKDMKIKELESKAAALKRAHLTEDTDSAELKQIKNEIANVSKKSLSEVVLPINEEYDWDLISNALNSKHNGLEHMSFWKLFLHPAINKSEWSDDEIKRLFTLAKQNNNQNWDKIAIDLNTSRSGLQCFMKFRSHLVTRENSAKWTREEEEYLRRVIDFYREDGHIPWNKVSAVVQNRTKNQIYTKYLRLYSKRTGRFLPEEDAVLLICADLFGKDYNKMTQYIPGRSALQLRVRHNVLIYPPNTVTWTCEEDNKLLKLIENSKCKESHSFSQIVKYFEGKTRVQLRTRYITLKTWMRRNPKNDITMAPRRRARDLYNNCDPSNLSDAIECLRKRLEIEVENKKSSVVSAYSPEVEIDRAISDTLIKTRLYKLPKRDNFTPDNFHLVDASVSKKNGNIHNIKCILILLYAKLNKSKFPETEHFKTYPGLIEESKARKSYSRIAQVAKAADIWGENPVPLHDYVIPPNYDTMIACRKLFSLLKYDPSLKKKVMYVGHFVKNKPEVTNQYTILLYRLKILFSWVFKICKVDPNALNYSGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-