Sbip018789.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- clz9
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000778.1:1215649-1217628[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-07 0.00011 23.1 0.0 3 39 16 53 14 59 0.91
Sequence Information
- Coding Sequence
- atgcctcgaaaatatattaagaaaaaagaagcagcttacaccattgaaactttacaaagagctgtgcaagaaattaaagagaaaaagactccttttcgacaggtggcagagaagtatggcattcccagagcgaccctgtttgatcaagtaaaaaaagtctgtgttaataccatgccaaaaagaggtaagaagtccgtttttaatgaagctcaagaaaatgaactggtcgaattcattttgaaatcttgcaaagctttctttgggataacaattcctactttaagaaagattgcatttgattttgccgctgctaataatatagcgaatgacttcaataaagataccaaaatggcaggtatagattggtattataattttatggctagacatcccaatatatcactccgaaggccagaagctacttcaataaacagaatcacagcatttaatcaagaagaaacagatatatttttaaaaaatttgaaaacactcatgataaaataccaatttaaatcgaattcaatctacaatgttgatgaaacagggattagtactgtacaacgaaattctaggattctcgcaccgaaaggattaaaacaagtaggtaaatgcaccagcgcagaacgtggttccttgaccacagttataaattgttttagtgctggaggcacatacattcccccgtttttcatatttaagagaaagcgaatgaatgcacagcttatgaaggattgtaatagtaatatggtggcttgtgtttctgactcaggctggataactgaaacacttttcgtcgattggcttcagcatttcaaggcatttgcaaaaccaactgcagatgatcctattttaataatactggacaaccatgaaagccacgtcagtttgagagctcacgaattttgtcgcaagaattttattcatgttttaactttgccgcctcacacatcccacagaatgcagcctttagatttaactttccatggcccactaaaaacagcgtacaaccgagaatgcgaatccttcatggtcaaccatccaggcaccaaaattacggtatacgatgttgtaggcctttatacaaaggcttttaatagaaccacaagtactgaaaaagctataaatggctttaagtctgctggaatttgtccaatggatcaagataaatttaaaaacacttttgaaagttttagtgaTATTTCTTCATCAGTCTCTCTTCTTGAACAACAGGTACAAACAAACACAAATAATTCAAGCCAAGGTGAACCCCAGAATGAATCTCTAGTTGTCATTTCTTCATCAGTCTCTCTTCTTGAACAACAGGTACAAACAAACACAAATAATTCAAGCCAAGGTGAACCCCAGAATGAATCTCTAGTTGTCTGTGATGCTGCCAATGAGAATATTTCTAATCCAATAGAATCTCAAGAAATGTTACAACTTTCCAATAATGAGGCTAACTCTGACGGTTTAAATGAAACAATTCCTACATCTTCTTTAGTGAGTGAGATGAGTGAAGCTGGTGTAAATCAAAATAGAGCAAGTCAATCTTGTCCATCTCCCTTAGTATCACTTAGTAATATAGTGCAGGTACCAACAATAAAAACTACTCGTACATCACGACTAGTtaaaaaaaaacattctattattttcaccagcacaccgcaaaaagcaaacctagaacaaaaagaacaaaagaaaatagaaagaaagagaaagaatctgaaacaagaaaagactaaaactacaaataagaaaccaaaaaacaccaaagaaaaacgaccaaaaggcttaagaaacttaaacaattttgaatgcgataaagaaaatgatgaatatttctgcatttattgccaagaaaagtactgtgatccgcccgcagaagactggattatgtgttccaaatgcaacaattgggcacatgagaattgtagtgctgggtcttcttcaagaggctacgtttgtgaattctgcaaatga
- Protein Sequence
- MPRKYIKKKEAAYTIETLQRAVQEIKEKKTPFRQVAEKYGIPRATLFDQVKKVCVNTMPKRGKKSVFNEAQENELVEFILKSCKAFFGITIPTLRKIAFDFAAANNIANDFNKDTKMAGIDWYYNFMARHPNISLRRPEATSINRITAFNQEETDIFLKNLKTLMIKYQFKSNSIYNVDETGISTVQRNSRILAPKGLKQVGKCTSAERGSLTTVINCFSAGGTYIPPFFIFKRKRMNAQLMKDCNSNMVACVSDSGWITETLFVDWLQHFKAFAKPTADDPILIILDNHESHVSLRAHEFCRKNFIHVLTLPPHTSHRMQPLDLTFHGPLKTAYNRECESFMVNHPGTKITVYDVVGLYTKAFNRTTSTEKAINGFKSAGICPMDQDKFKNTFESFSDISSSVSLLEQQVQTNTNNSSQGEPQNESLVVISSSVSLLEQQVQTNTNNSSQGEPQNESLVVCDAANENISNPIESQEMLQLSNNEANSDGLNETIPTSSLVSEMSEAGVNQNRASQSCPSPLVSLSNIVQVPTIKTTRTSRLVKKKHSIIFTSTPQKANLEQKEQKKIERKRKNLKQEKTKTTNKKPKNTKEKRPKGLRNLNNFECDKENDEYFCIYCQEKYCDPPAEDWIMCSKCNNWAHENCSAGSSSRGYVCEFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276295; iTF_00276285; iTF_01152041; iTF_01166607; iTF_01076376; iTF_01076375; iTF_00809051; iTF_00809052; iTF_00809043; iTF_00208798; iTF_00208789;
- 90% Identity
- -
- 80% Identity
- -