Sbip014030.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- -
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000711.1:1388144-1390486[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-07 0.0001 23.2 0.0 4 38 13 51 12 56 0.88 2 2 6.8 1.1e+03 0.7 0.0 24 34 151 161 139 167 0.86
Sequence Information
- Coding Sequence
- ATGCCGAAAGCCCCAAAGCAACCATATTGTTTTAAAAACCTAGAAAAGGCCGTTAAAGAAATAAATAGCACCATTGATAAGAAAAAAATCTCGATACGTAGCATAGCTAAAAAATATGGAGTGCCTAGATCAAGTTTAAGCTATCATCTCAAACATCCGGGGCAAAAGACGTCGATGGGCCCCTCTCCAGTTTTAACGACTGATGAGGAAGATCGTTTAGAGCAATGGGTTATACAAGACGCTATTTATTATTCAAAGTGCTTAGGTGGCAATTCAGCAAAACCTCTCTTTCCCAAGGTCTCTTCGGACGCAATGATCAGCTTCTCGACATTCTCGGATATAATCGGACCCACACTTCTAAATGATCTTACAAATAACGCTGAAACAACTGAGACAAAGACTGTCAACATAGAAGTAATAGAAGGGAAACTTATTTTAGAAACTAGTAACTCCATTTTCGACGTTAGTGCATCAGTTTTAAACAAGGAGCAATTTGAACAAGTTACTTTAAGTGATCCAATAACAGCCATTATCGAAGATACAGACACCACCGAACCCACAGTTTTAAAAATCACATCTCCATCCATTTTAGTAAAACAGAAACGACAAAAAGAAAATATTCCTTGTAAAGGCGACAGCGCAAAATATACATTCGATTCCAAAAATTCATTACCAAGTATGTCTAAAAGTGAGCTTGCCTACTTGCCGAAACATAACAGCGTTTTTGAAACTCCAATAAGAAAAGGCAAACGAAAATCAGAAAGACAACCTTATGCTATCACATCTAAAAATTTTAAGATCGCTGTGGAGAAAAAGAAGTCTGACAAGGAAAGAATTGAAAAAGAAAAAGAAGAGAAGAAACAATTAAGAGGACAGAAAAAGACAGAAAAGGGTAAAGCAATAAAACCAAAGGAAAATAAACCAAAGATGACAGAAAAATATTAA
- Protein Sequence
- MPKAPKQPYCFKNLEKAVKEINSTIDKKKISIRSIAKKYGVPRSSLSYHLKHPGQKTSMGPSPVLTTDEEDRLEQWVIQDAIYYSKCLGGNSAKPLFPKVSSDAMISFSTFSDIIGPTLLNDLTNNAETTETKTVNIEVIEGKLILETSNSIFDVSASVLNKEQFEQVTLSDPITAIIEDTDTTEPTVLKITSPSILVKQKRQKENIPCKGDSAKYTFDSKNSLPSMSKSELAYLPKHNSVFETPIRKGKRKSERQPYAITSKNFKIAVEKKKSDKERIEKEKEEKKQLRGQKKTEKGKAIKPKENKPKMTEKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -