Sbip040198.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- -
- Assembly
- GCA_944452705.1
- Location
- CALYCB010001231.1:1328834-1329277[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-08 3.9e-06 27.7 0.0 2 40 16 54 15 58 0.91
Sequence Information
- Coding Sequence
- atggttaacaattacaaacgaaaaactacccaggcctcttgggatgaagctacgatggcccgagcaattaaagaaattaacgaaaaacgcggctcagtaaaatgtattgcaataaaatacggtatccctcgtaccacacttagacgacacctacaaacaggatcagctataaagaaacttggcagatttacaacagtatttactccagaacaagaaaaagagctgctagagtacacgttccatatggacaatctgttttttgggctttcaaaggaagatttcttgcagcttgtgtttcaatacgctgaagctaattacattccacatccttttaagaatcaaaccgctggacacgatttttataaaggatttataacacgtcatcctactttgaccttgagaagaccagaacccacgtcaatcgccagagctcgggggctttaa
- Protein Sequence
- MVNNYKRKTTQASWDEATMARAIKEINEKRGSVKCIAIKYGIPRTTLRRHLQTGSAIKKLGRFTTVFTPEQEKELLEYTFHMDNLFFGLSKEDFLQLVFQYAEANYIPHPFKNQTAGHDFYKGFITRHPTLTLRRPEPTSIARARGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147368; iTF_00147369; iTF_00147361; iTF_01246816; iTF_00404782; iTF_00404772; iTF_00404775; iTF_00404776; iTF_00172800;
- 90% Identity
- -
- 80% Identity
- -