Sbip013989.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- -
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000711.1:1140750-1142061[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-08 1.6e-05 25.8 0.0 3 37 17 51 15 57 0.94 2 2 9.3 1.5e+03 0.3 0.0 22 30 142 150 128 151 0.78
Sequence Information
- Coding Sequence
- ATGTCTGGAAAGTACCAGAGAACCACTCTTCGAACATCGTGGAGTGCAGACGATTTAGATAAGGCGATGCGATGTGTTCTAAGTAAAGAAATGGGTGTAAGCGAGGCATCCAGAAACTTTGCCATACCGTCACGGACCCTGAGAAGGCACCTATTATCGGGACAATCGAAAGGTCCTTTAGGACGAAAACCAGTGTTTTCTGCTGAACATGAAAAAAAACTGGTTGCCCATATAAAAAAATTGGAAAAAGTTGGATTTGCCCCTGATCGCAAAGACGTTAAAGAAATGGCTTTTCAATTAGCCAAGAAACTCAAAATTAAAAATCCATTTTCATCAACTTCGGAGTCAGCCGGAAATGTGTGGTTTTCGGGATTCATGACTCGGAATACAGAATTAAGCCAAAGAAAATCAGAAGCTCTATCACTTGCTCGAGCTTATGGCGTTAATAGAAAAGATGTTCAAGATTTTTTTGATTTATTGGCCAAAATTTACGAAGAAAACGATTTTGCTAATCACCCTGAAGACATTTTTAACATGGACGAGTCCGGCATACAAGTGAATAACAAACCAGGAAAAGTGATCGCCACAAAGGGAGCCAAAGATGTCTACACGCTCACTAGCAGTGAAAAGGGTGAAAACGTAACGGTAATTGCTTGTTGCAATGCTCAAGTCTTAGACGGTCACAGCTCGCACAGTAACAATATTCGCCTCCTGGAAGTAGCTAAAGAAAATAATGTTATTCTCTTATGTCTACCAAGTCACACTACGCAAGTTTTGCAACCTCTCGACAGAGCCTTCTTTAGGCCATTAAAGGTATACTTCACCCAAGAACCGAAGGCATGGATGGTAATGAACAAAGAAAAGAAGTTGACGCGCTATGACGTGTCTAAGTTAATCGGACGAGCTTGGGGCAAAGCTGCCACTATTTCTAACGGAGTTTCAGCATTGAAATCATGTGGTATTCATCCGTTTGACCCGAGTGCTATTCCTGATCACTATTTTTCACTCTCTGATTCGCTGCAAGAACAAAATTTAGTAGTTGAAGATGACAATGGGTCAAGGATTTCACCAGAGTCTCTATCATTGCTTCAAGAGTATGATAATTGTTTACCAACTGTGTTCGATACAATCTGTACATAA
- Protein Sequence
- MSGKYQRTTLRTSWSADDLDKAMRCVLSKEMGVSEASRNFAIPSRTLRRHLLSGQSKGPLGRKPVFSAEHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLKIKNPFSSTSESAGNVWFSGFMTRNTELSQRKSEALSLARAYGVNRKDVQDFFDLLAKIYEENDFANHPEDIFNMDESGIQVNNKPGKVIATKGAKDVYTLTSSEKGENVTVIACCNAQVLDGHSSHSNNIRLLEVAKENNVILLCLPSHTTQVLQPLDRAFFRPLKVYFTQEPKAWMVMNKEKKLTRYDVSKLIGRAWGKAATISNGVSALKSCGIHPFDPSAIPDHYFSLSDSLQEQNLVVEDDNGSRISPESLSLLQEYDNCLPTVFDTICT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -