Basic Information

Insect: Stenoptilia bipunctidactyla
Gene Symbol: clz9
Assembly: GCA_944452705.1
Location: CALYCB010001031.1:17254-19938[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-09 6.6e-07 30.2 0.0 1 39 25 63 25 68 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-09	6.6e-07	30.2	0.0	1	39	25	63	25	68	0.92

Sequence Information

Coding Sequence: ATGGTGCGAACATATCAAAGGAAGTATACCAACACACGTGATGGCAAATCTCATCCACCATATGCAATGTATTCTGAAGAAAATTTACAAAAAGCAATAGAAGCTGTTCGAAATCGTTCATTAAGATTAAAAGAGGCCGCCGAAAATTATAACATTCCTATGAGCACGTTAAGCAGAAAATATAGAAATATAAACTGCACTCAAGAAAAAGCGGGACACCCTACGCTATTTTCAAAAGAAGAAGAGAATGCGTTCATAGAAAATATAAAATTACTTAGTCATTGGGGATTTCCTCTAGATTCAACTGACCTACGAGTCTATGCACAAAAATACTTGAATAAAATTGGAAAAACCATATATAGCATACAGGACAACATGCCCGGCGTAGACTGGGCGCGCAATTTTTTAAACAGGCACAAGGACGTAATTTCAAATCGCGCAGCAACAAATATATCTTGCGATCGCGCTAGAACCACACCACAGACAATAGACAACTTTTTTCAAAATTACACAAAATCTGTCGAAGGAGTCGCCCCAGATTGCCTCATCaactatgatgaaaccaatttgactgacgatccagggagcaaaaattacattttcaagagaggctgtaagtatcctgaaagagtcattaattgctctaagacatcaatttctttaatgttttcgggtactgcagatgggcaaaccttgccaatatatgtagtgtataaagctgatcacttgtgggatcaatgggtgcagggaggtcctgcagaaaccaggtacaaccggtcgaagagtggatggtttgattcggtgtgttttgaagattggtttaataccgttatagtgccatacgcgagaaaaaaaccaggacggaaagttgtgataggagataatttgtcttctcatttctcgcaatcagttttaaaaacttgtgaagaattgaatatatcattcatttgcttaccgccaaagactacacatcttcttcagccattagatgtggctttttacgcccctttaaaaaagtattggcgtgatgtgttaacaaaatggaaGAAAACAGAAGGATTGAAACACAAGACTTTGGTAAAAAGTTCTTTCCCGAAGTTATTAAAGAAACTGAAAGATAAGTTGGCGGAGAATGGCGCGGAATCTGCTAACCTAATTGCCGGATTTAATAAATGTGGTTTATATCCCATAAATCCAGAACGTCCCAAATCACGGTTACCACAAAAAGAAATTATTTCTGAAGACCAGATAGAGAAGACAACAACTTCAGTCGTAATAGATATTTTACAAGAAATGAGAAGTCCTGCAAGTGCCAACGGACAAACAATACGAAAAAGGAAATGCAATGTACCACCAGGAATTAGTGTAAGAGCAGAAGACTTAGTGCACAATCAGACAGAAAAAAACAAACAGCAACTCAAACGGAAAAAGAAAAAAAAGAAAGTGTCGGACAAAAAGAAGAATAGAAATTCTTTAGACGAAGACAATTACATTGATTCTGAAAACACAAGAGGAGCTGCAGAAGAAGTAAATCTGGTTAATACACAGCCAATAGCAGGACCTTCCGGGCTATGTAATCCTTACACGATTAACTCTGACTCCACTCCCTGTAGCTCAGATGATGAAAGATTAAAAAAACCAGAAATTGAAAAATACCAATCAATTAAAGGCAAAGGCAAGGGAAAAAAAACCAAAATCAAAGCAGAAAATAATGAAACTAGAATATTACCATATAATTTGGAAGAGAAACCGGCATCTGAAGATAATATAGCTATTGAAGGCAAGAAAATTAAACCAAAAACAAAGAAAAAGCAGAAGAAAATAAGTGATTTTAAAAATTTGGACTTAGACCCAGAAAGTATTGAAAGATTGATAGCTAGTGTTAAAGCAGAGAAACTCAAAAATAAAAAATCCAAGAGAGTATCAGATTCTGATACTACCAGTGTGTCAGATATCATGAGCATCCATAGCGACTCGGACATTATAGATGTTAAGTTCGGTCAACAAAGTCCTGATGAATGCTACGAACGTTATGAAGACATGAGAACCTGCACAGACGAACATCCCACAGTTGTAGAAAATATCTCCATTCCTGACCACGATGATAAATTGATAGTTATAACAGATGCTTCTGATGAACAAAAGACTGATAGCAACTTGAAGACTAATTATGATAGTAAGTTAGATTATGTAACTGATAAGACTGGAAACAATCCAAGCAATGCAGCGATTTGTGATATTACGGATTTACCCAATCCTATTCCCTTAACTAATATAACTAATAATTACAATAGACAAGAAACGCAAAAAGATACAAATATAACGAATAATTACAATAAAGAACAAATGCAAGAAGATGAGTCAAAACAAGAATGCAATGATTCTCAAAAAGAAAATTTGTATGCCATTAACGACCATGTCTTAGTGCGCTACTGCAACAATATGAAAAGTCAATATTACATTGGATTCATCGAAAATATTAAAATAGATGGATGTAAATTCAAATACACCATTAATTTTTTCAAGACAATAAGAAAACCACAGCTTTCATTTCGGATTGGCAAGAAAATTGATCGAGATGAGGTTGATGATATATGGATTGTGAAAAAAATTCTTCTGAATGAAAACCCTATGAAAACCAAAGAGTATCTACTCTCTGAAAAATGTGATGAGATGTATTTTTGA
Protein Sequence: MVRTYQRKYTNTRDGKSHPPYAMYSEENLQKAIEAVRNRSLRLKEAAENYNIPMSTLSRKYRNINCTQEKAGHPTLFSKEEENAFIENIKLLSHWGFPLDSTDLRVYAQKYLNKIGKTIYSIQDNMPGVDWARNFLNRHKDVISNRAATNISCDRARTTPQTIDNFFQNYTKSVEGVAPDCLINYDETNLTDDPGSKNYIFKRGCKYPERVINCSKTSISLMFSGTADGQTLPIYVVYKADHLWDQWVQGGPAETRYNRSKSGWFDSVCFEDWFNTVIVPYARKKPGRKVVIGDNLSSHFSQSVLKTCEELNISFICLPPKTTHLLQPLDVAFYAPLKKYWRDVLTKWKKTEGLKHKTLVKSSFPKLLKKLKDKLAENGAESANLIAGFNKCGLYPINPERPKSRLPQKEIISEDQIEKTTTSVVIDILQEMRSPASANGQTIRKRKCNVPPGISVRAEDLVHNQTEKNKQQLKRKKKKKKVSDKKKNRNSLDEDNYIDSENTRGAAEEVNLVNTQPIAGPSGLCNPYTINSDSTPCSSDDERLKKPEIEKYQSIKGKGKGKKTKIKAENNETRILPYNLEEKPASEDNIAIEGKKIKPKTKKKQKKISDFKNLDLDPESIERLIASVKAEKLKNKKSKRVSDSDTTSVSDIMSIHSDSDIIDVKFGQQSPDECYERYEDMRTCTDEHPTVVENISIPDHDDKLIVITDASDEQKTDSNLKTNYDSKLDYVTDKTGNNPSNAAICDITDLPNPIPLTNITNNYNRQETQKDTNITNNYNKEQMQEDESKQECNDSQKENLYAINDHVLVRYCNNMKSQYYIGFIENIKIDGCKFKYTINFFKTIRKPQLSFRIGKKIDRDEVDDIWIVKKILLNENPMKTKEYLLSEKCDEMYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01280186;
90% Identity: iTF_01367806;
80% Identity: -