Sbip016939.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- Mblk-1
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000747.1:477153-509494[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-12 9.1e-10 39.4 0.0 1 38 171 209 171 214 0.92 2 2 1.1e-17 1.7e-15 57.7 0.0 1 43 359 402 359 404 0.95
Sequence Information
- Coding Sequence
- ATGTTTGTGCGTCCTCGGCCGCCATTGGTCGAGGCCGCGAGTTTAGAATTAGAATGTGTAGACCCCACCATTTGGCGAACGAGTCCAGCATCAGAGTCGGACAGCAGCTCGGTGTCGGGCGCCAAGTCCCCGGCCGCTGCGCCGCCGCTGCTGCAGCATCTCCTCCAGATGCAGCTGCAGGCGCAGACTCCGCAAGCTATAGCCCAGTTCCAGCAGATGGTGGCGGCGCTGGCGGCGCTGGGCACGGGGCTGGTGCCGCCGGCGCTGTCGCAGGCCTGGCTCATGCAGCGGCTGGTGCGCCCGGGAGTCGACAGCAGGCCACCAGATGGCATCGACAAGCCGATGCCCAGTTCCTCACCAGCGCTGGCCGAGCAGCCGTTGGACCTCAGCGCTAAATCTACCTCCAGTACAAGTGGCACGCCGCCGCCCGATGTCAAGAATGACCATTCCAGGTTAAAACGCCTGTGCGAGGGCGGCGGCGGCGGGGGGGGCAGCAGCCGGCGCGCGTACTCGGAGGACGAGCTGCAGCTGGCGCTGCGCGACATCGCGGCGGGGCGGCTGGGCACGCGCCGCGCCGCCGCCGTGTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTCAGCAAGCTGGGCGCGCCCGCCGACCCGCCCGACTCCGACGCCGACACCGACCCCGACCGCGACTCGCCGCCGCCCACCATCCTCAAGATACCCACCTTCCCGCCGCCCGACGACGCCCCGGCCGTCGCCCCCGTCACGCCGCTGCTGCAGCCGCAAGCGCCGCCGCCGCTGCTGCTGGCGCCTTCCGTGTTCGCAGACCCGCCTTCGACGCTCTTCACCTCGCTCAGCGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCACTGGAGCGACCGCACCCGGAGCTCGGTTTCGCGCTGCGGCCAGAGCGCCACGTGTCCGTCATCAAGACGCCGCCGGACGGCGCGCGTTACCCGGCGCCTGGCAACTCGCGCGCGCCCAACAACGGCCAACCAGCGGCCGGCGGAAAGGGCACGCGGCCGAAACGCGGCAAATACCGCAACTACGACCGCGACAGCCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCAGCTACTACGGCGTGCCGCACTCCACGCTCGAGTATAAAGTCAAGGAGCGCCACCTCATGCGCCCGCGCAAGCGCGAGCCCAAGCCGCAGCCGGACCTCAAGCCACAGCCGCCCAAGCCGCAGCCGCCCAAGCCGCCCGGGAAGCCCTTCTCCAACGGCATGAACGGGCCGGACGGGTACCCGGGGTACGGGTTCTGGGGCGCGGGGTTCGCGCCGCCGCCGGCGCCCGAGCTGTACGCGTCGCACATGATGCGGCGGCTGCGCGAGGAGGCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCCAGCCTGGAGCGCGGCGCGGGCGGAGCGGGCGCGGCGGGCGGGGAGGAGGAGCCGGCGGCGCGGCGGCCGCGGCTGGACGCGGCGGGGCTGGCGGCGGACATGCGCGACGCGGTGCAGCGCCTGCGCGCGGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCCGCCGCGTCGCCGCCCGCGCCGCCCGCGCCGCCCGCCCACCCCGCGCCCGCGCCGCCCGCGCCCGCGCCCGACGCCGTCTAG
- Protein Sequence
- MFVRPRPPLVEAASLELECVDPTIWRTSPASESDSSSVSGAKSPAAAPPLLQHLLQMQLQAQTPQAIAQFQQMVAALAALGTGLVPPALSQAWLMQRLVRPGVDSRPPDGIDKPMPSSSPALAEQPLDLSAKSTSSTSGTPPPDVKNDHSRLKRLCEGGGGGGGSSRRAYSEDELQLALRDIAAGRLGTRRAAAVYGIPRSTLRNKVSKLGAPADPPDSDADTDPDRDSPPPTILKIPTFPPPDDAPAVAPVTPLLQPQAPPPLLLAPSVFADPPSTLFTSLSDVIAKSISQKFQQPLERPHPELGFALRPERHVSVIKTPPDGARYPAPGNSRAPNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLKPQPPKPQPPKPPGKPFSNGMNGPDGYPGYGFWGAGFAPPPAPELYASHMMRRLREEAPPANGSFLEGIIRSSLERGAGGAGAAGGEEEPAARRPRLDAAGLAADMRDAVQRLRADKLRPRNGTPTPPAASPPAPPAPPAHPAPAPPAPAPDAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -