Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig338:219720-223117[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.8 3.4e+02 1.7 7.3 1 23 155 177 155 177 0.95

2 11 0.00012 0.0072 16.5 0.5 1 23 183 205 183 205 0.99

3 11 0.0011 0.064 13.5 0.7 1 23 211 234 211 234 0.97

4 11 0.00014 0.0084 16.2 1.4 1 23 240 262 240 262 0.98

5 11 9.7e-05 0.0057 16.8 1.9 1 23 268 290 268 290 0.99

6 11 0.00066 0.039 14.1 3.1 1 23 296 318 296 318 0.99

7 11 0.002 0.12 12.6 0.3 1 23 326 349 326 349 0.97

8 11 6.9e-05 0.0041 17.2 3.2 1 23 355 377 355 377 0.99

9 11 0.00061 0.036 14.3 1.2 1 23 383 405 383 405 0.98

10 11 0.0012 0.073 13.3 3.2 1 23 411 434 411 434 0.94

11 11 2.7e-05 0.0016 18.5 1.0 1 23 448 470 448 470 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.8	3.4e+02	1.7	7.3	1	23	155	177	155	177	0.95
2	11	0.00012	0.0072	16.5	0.5	1	23	183	205	183	205	0.99
3	11	0.0011	0.064	13.5	0.7	1	23	211	234	211	234	0.97
4	11	0.00014	0.0084	16.2	1.4	1	23	240	262	240	262	0.98
5	11	9.7e-05	0.0057	16.8	1.9	1	23	268	290	268	290	0.99
6	11	0.00066	0.039	14.1	3.1	1	23	296	318	296	318	0.99
7	11	0.002	0.12	12.6	0.3	1	23	326	349	326	349	0.97
8	11	6.9e-05	0.0041	17.2	3.2	1	23	355	377	355	377	0.99
9	11	0.00061	0.036	14.3	1.2	1	23	383	405	383	405	0.98
10	11	0.0012	0.073	13.3	3.2	1	23	411	434	411	434	0.94
11	11	2.7e-05	0.0016	18.5	1.0	1	23	448	470	448	470	0.97

Sequence Information

Coding Sequence: ATGGCTGCGAAGATCGAGCCCGAACCGGAGAGAGAGGTCGGTCGTTTTGAAATTCAGAAATATCTGGACGAATTCAATGAAGAACTCGAACAGGGAGAAAGTCGGGAGGAGAGCGCCAAGCGGGAGAGCGACCCGGGCACCTATTTCATCGACGAAGACGGACAGCTGTACTTTCAACCGGCCGGCGACGACTCGAACGGGGTCGAAAGTGAGACGGCGGCGGAGGACCGCCGGGCCGCCGACGGGGACGACGCCGAGGGGGCCGACGCCGAGGGGCGGGAGAGCGTCAGCTATCTGTACATAGTCGAGGAGGGCGAGGAGGACAAGCCGGAGGCGAAGGAGGAGAACGACATCACGGTGTACGACTTCGACGAGGACAACGACGAGAACGTCTCCGCCGGGGCCGAGCGGGAGCGCGAGGCCGACAAGAGGGGGGCCGCGTCCAAGAAGGCGAAGAGGATGCACTACTGTCCTCACTGCGACTACTGCAACTCCAAGCGCATCCTCGTCCACAAGCACATGGTCATACATTCCGACGAGAAACCGTATAAATGTTTCATCTGCGCCAGGGGCTTTCGCACAGTGGCCTCTCTGACCAACCACGAGAACACCCACACCGGCAACAAACCTTTCAGGTGTCGAGTCTGCAGCGCGAGGTTCACCACCAGCGGAGAGATAGTCAGACACGTGAGATACCGACATTCGAAGTTCCGACCTCACAAATGCAACGAGTGCGACTACGCGGCGGTGGAGCTCTCCAAGCTGCGGAGGCATCAGCGTTCGCACACGGGCGAGCGACCGTACCAGTGTCCCCACTGCACCTACGCCTCTCCGGACACTTTCAAGCTGAAGAGACACCTGAGGGTGCACACGGGAGAGAGGCCTTACAAATGTAACATATGCTGCGCGGCCTTCAGCCAATCCAACTCTCTGAAGACTCACCGTCTGACGCACTTTCCCGAACAGAGGCCCGTGTACCAGTGCGCCCTGTGTCCGGTCACCTGCGGGCGGAAGGCCGACCTCCGGGGCCACATCAGCAAACTCCACACGGCCAGCAAGCCCTACGAGTGCAAGCGCTGCGGCAAACACCTGCCCGACAGATATTCCTACAAGACGCACATCAGATCTCACAGCGGCGAGAAGTCGTTCAAGTGCAACGTCTGCTCCTACGCCTCCGTCTCCAAGATGCATCTGGCCTCCCACATGTACATACACACTAACGAGAAGCCGTACGAGTGCGACCAGTGCGACTACAGATCTCGCCAGAAGCAGCTGCTGAAGAGGCACAAAAATTTCTATCACACTCCCGGATTCGTCCCCCCGGAGGCCAGCGCCGGCTCCCACGAGTGCGAAGTGTGCCAGAAGAAGTTCATTCACGTCGGGAATCTGATAAAGCATCTGGCGGTGCACGATCCCGACTCCAACGTGCACGAGAAGAAGAAAGCCCTCAAAATGGGCAGAAAGTGCAGAGTTTCGACGGCGAACGACGAGGAGATCATAAACGAACTGCCGAGTGTGACGAAGGTGGAGGGATTCGAGGACGACGAGCAGCACTACGTCGTGTTCGAGATGGTCGACGCCGACGAGGAGGAGCAGGAGGAGACCGGAGCCCGGGGACCCGACGGGCAGAGCGCCCCGCAGGACGCCAAGATGGACATGGAGAACTGCTTCGGCTTCGACGAAGAGGAGGACGACGACCGTCGAGACGAAGACGAGGACGAATCTGTCAAATGA
Protein Sequence: MAAKIEPEPEREVGRFEIQKYLDEFNEELEQGESREESAKRESDPGTYFIDEDGQLYFQPAGDDSNGVESETAAEDRRAADGDDAEGADAEGRESVSYLYIVEEGEEDKPEAKEENDITVYDFDEDNDENVSAGAEREREADKRGAASKKAKRMHYCPHCDYCNSKRILVHKHMVIHSDEKPYKCFICARGFRTVASLTNHENTHTGNKPFRCRVCSARFTTSGEIVRHVRYRHSKFRPHKCNECDYAAVELSKLRRHQRSHTGERPYQCPHCTYASPDTFKLKRHLRVHTGERPYKCNICCAAFSQSNSLKTHRLTHFPEQRPVYQCALCPVTCGRKADLRGHISKLHTASKPYECKRCGKHLPDRYSYKTHIRSHSGEKSFKCNVCSYASVSKMHLASHMYIHTNEKPYECDQCDYRSRQKQLLKRHKNFYHTPGFVPPEASAGSHECEVCQKKFIHVGNLIKHLAVHDPDSNVHEKKKALKMGRKCRVSTANDEEIINELPSVTKVEGFEDDEQHYVVFEMVDADEEEQEETGARGPDGQSAPQDAKMDMENCFGFDEEEDDDRRDEDEDESVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -