Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig340:185450-190601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.93 55 4.2 0.1 2 23 6 27 5 27 0.96

2 14 0.11 6.3 7.2 2.5 1 23 654 677 654 677 0.91

3 14 0.14 8.6 6.8 1.0 1 23 772 794 772 794 0.98

4 14 6.6e-06 0.00039 20.4 1.1 2 23 797 818 796 818 0.96

5 14 2.1e-05 0.0012 18.9 1.0 1 23 824 846 824 846 0.98

6 14 0.00027 0.016 15.3 6.4 2 23 853 874 852 875 0.95

7 14 0.058 3.5 8.0 0.7 5 23 888 906 887 906 0.95

8 14 0.00039 0.023 14.9 4.3 3 23 913 934 912 934 0.97

9 14 0.24 15 6.1 0.9 2 23 950 970 949 970 0.97

10 14 9.8e-05 0.0058 16.7 1.3 1 20 976 995 976 998 0.92

11 14 0.0066 0.39 11.0 1.4 1 23 1006 1028 1006 1028 0.98

12 14 0.025 1.5 9.2 9.2 1 23 1034 1056 1034 1056 0.98

13 14 4.2e-06 0.00025 21.0 0.9 1 23 1062 1086 1062 1086 0.97

14 14 0.00038 0.023 14.9 5.1 1 23 1092 1114 1092 1115 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.93	55	4.2	0.1	2	23	6	27	5	27	0.96
2	14	0.11	6.3	7.2	2.5	1	23	654	677	654	677	0.91
3	14	0.14	8.6	6.8	1.0	1	23	772	794	772	794	0.98
4	14	6.6e-06	0.00039	20.4	1.1	2	23	797	818	796	818	0.96
5	14	2.1e-05	0.0012	18.9	1.0	1	23	824	846	824	846	0.98
6	14	0.00027	0.016	15.3	6.4	2	23	853	874	852	875	0.95
7	14	0.058	3.5	8.0	0.7	5	23	888	906	887	906	0.95
8	14	0.00039	0.023	14.9	4.3	3	23	913	934	912	934	0.97
9	14	0.24	15	6.1	0.9	2	23	950	970	949	970	0.97
10	14	9.8e-05	0.0058	16.7	1.3	1	20	976	995	976	998	0.92
11	14	0.0066	0.39	11.0	1.4	1	23	1006	1028	1006	1028	0.98
12	14	0.025	1.5	9.2	9.2	1	23	1034	1056	1034	1056	0.98
13	14	4.2e-06	0.00025	21.0	0.9	1	23	1062	1086	1062	1086	0.97
14	14	0.00038	0.023	14.9	5.1	1	23	1092	1114	1092	1115	0.96

Sequence Information

Coding Sequence: ATGGAGCGCCTCGTGCAGTGTCCCGTCTGCACGCTCTTCCTCCACCGGGGGATGGCGCTCGAGGTCCATCTCGACACTCATCCGAAGGATCAGGTCATCCGCGCGCTGTGCTCCCTCTCGGGGGCGCGGCCGAGAAGCGAACCGGAGGAGAAGGAGCGCGAGCCCGAATCTCCGGGGGCTCCGTCGCCGTCGTCTTCGTCGTTTCCGTCCGACTGGGGGGCGCGAGAGCAGCGGCGGGCCCCGCTCCATCTCGCCTTCCCCGCGTTCCTCGCGCCGACGGAGCTGAGCGCCGGGGCGCTGCCGGCGCCGTTCTCCTTCCCGACGGGCACCTCGTGCGACGGAAAGTTCTCTTCGCCCGGAAGGGTCTTCGCGGCCCTGCCGAGCGCGTCCTTCCGTCCCGACCTCCAGCTGCGGCCCGTTCTGCAGTCCCCGCCGGTGCGGCCGACCGTCCAGGCGACGATCGAGCCGCGTCCGACTCCGCGGCCTCCGCCGCCCCCGCGCCAGGCGAACTCGGACGCCCCGACCGATCCGGCGGCGTTCCGTCCGGAGGCCGCCGAAGAGCCCGCGCCGGGGCCGCAGCTCCCCCGTCCGCTCCCGTCCTCGAACTCCTCGGGAGCGTTCGCCGGAGGGACGTTCGGCGGGGTCTCCTTCCGAGCGAAGGCCCCCGCGGCGCCGCCTCCGGTGCCGTCGCCGACGGCTTACGTCTACGACGCGGACGTCCCGAGCCGCGAGGCGAGCCCGAGGGCGAGGGCGGAGGTCGGCGAGTCCGGCGGCAGACTCCGCGGCTTCAAGATCCTCAGCGACGTCAAGATTGAGCGCCCCATGCGCAGGGCGCCCCCGCTCGACGGCCGGCGGAAGCGCCCCGCTCCGACTCCGAGCTCCGACGTCGACGTCGAAGCGGACGCCGACGCCGACGCGGACGTCGAGGACGTCGTCTCCCCCGACTCGGGGACCGCGATCGAGGCGCCGCCGCGGCCTCCGTCCTCTTCGCCCCCGCCGTCGCCCGACTTCCGGCCGACCGGTGTGTTCTCCGTGATCAAGAACGTCGGCAGGACGCCCCCGACGGCTCCCGAGACGCCGAGGGCCCCCGAAAATCCGGCGAAGCGCCGCAGCCCGCTCCCGGCGGGACGCGGCCCGAAGCCGAAGAAGCTCGCCGTCAAGTACCTCAAGCCGAAGATCGAGCCCCCGGACTGTCCCGAGGAGCTGCCGCCCGACGTCGACGAGGACTGCAAGCCTTCGATAGCGCGCGTCGTCCAGTTCGAAACCGAGCTCGGCCTCCGTCGCGCGTTCGAAGACCCCGGCGCGTCTCGGCCCGAGGCCGTCCGCCCGGGAAACGTGATCGCCTTCGGCGGACCGGCCTCCCCGGCGGCCTCCGCGGCTTCGGCCGAAGGCTCCCGCTTCGCCTTCTCGCCGACGAGGGCGCCCCTCGAGAGGGACTCGCCTCCGCCGCCGCCGCCGCCGCTGCCTCCCCCTCCGCTTCCGTCGATCGCCGGCAGCATCGGGAAGATTGAATTCCGCTCGGACGAAATCTACTACTCTTCGAGGCGGGTCGCAGCGTTCACGTTCGACCCCGGAGCCTACGCTCCGACGGCGAAGGACGCCCCCGCGCAGCCCGTCGGCTTTAAAGTCGAAGACCCCAAGGAGTCGTTCTTCGACGCCTCCGGCTCGAGCGGCGTTCCCGCGAAGGAAGAGGAGGCGATCAACATCCGCACGGACGAACGCATGCCGCCGCGGGGCGAGCTCTCGGAGCAGGAGAGCAGCGGAGACACCGATGCGCCGTGGGCGGGAATGTATCGAGATATGGGAGGATCGACTTCTTACGATTTGCTAGCCAGAGAGTCTTGGCAGTCCGACGGATCCGATGTCGAGGCACCCCTCAGCCCGCAGAAACTAGCCATTCACGAAAACGAAGTGGAAGATATTCCGATCGTTGTTTCTGTCAAGCCTCCGGATAAAAACTACAAATGCGCCACTTGCGGCAAAGCATTCAACTGTCCCAAAGAACGTCGAGTGCACAGGACGAAGGAGCATCCGATCGGAGCGTCCAATATCATGCTCGAGAGGAAGATCAGAAGAAAACAAGTATTGCTGAAGACGAACATCAAGATAAAAAAGGAAAGAACTGTCAAAACTGAATGCGTCGTCACAACGTCCAGTGTGAATATATTGCGGATCGAAAATGAAAATGTCTCCACTAGATTGGATATTGAACCCGTTGTTCCGGATTTGAAAAATTTGGAAATACTGAATAATTTAGAAAACAAACCCAAGCTGGAGCTAGTAAAAGTCGAAGGAAAGAAAAAACGGCAAGACTACACGTGCGTCACTTGCAAGGCAGAATTTCCGTCGGATAACTTGTTTCATGAACATTTAAAAATTCACCCTCTCGAGTGTCTGACGTGCGGGAAATTATTCAATAGACGCTCTAACTTGCAACTACATATAAAGCGTCATTTGGGAATTAAAAATTTCAAGTGTGATATTTGTGAAAAACGTTTTGTTACAAAACAGAAACTAGTCGAACATTATAATATTCATACTGGGAAATCTCCCATCAAATGTAATCTCTGCGATCTAACATTCCGTCGACATTCGAACATGACACAGCATCGAAACCGACATCATTTTCATATAAAGAGAAGACTACGCGATTATGTGTGTATATGTGGAGAAGTTTTTCATTCGAAAAAGAAATTAGCTTGGCATAAGGAAATTCACGACGACAAACCCAAAGCCTGTCTTCATTGCAACGAAAAGTTTATTCATACGGCATCGTTGACCAGACACATGCGTCGCACTCACAATCGTTATTTCGTACCCGATGAAAAACGGAAAAGTGAAAACGTTCAGTGCCCGGAGTGTAATCATATATATTTGAAATCATCCATAGATATGCATATGAAAACTCATACGGGAATGAAACCCTATTCATGCGTGATATGTAATAAAAATTTTACAACCAAATGGAACCTCAAGTTGCACAAGTGGACTCACGCCAACAGATCGAGCAAACCTTTCAAATGTGCACTGTGCAAAGGTGCGTTTATAAGACATACCGATTACGTATCCCATATGAATTCGCATAAATCCGTTAGACCGTACACCTGCAACCATTGCGGTTGTCAATTTATTAGGAAATACAATTGTCAGAGGCACGTCAAAGAGCACGAAAACGAAAAGAAGTACGTTTGCGAGGTGCCCGATTGCGGCAAAACCTTCCACAGAAGCTATTATTTGACTGATCATTTGAAAGTTCATTCCGGGATCAGACCCTATTCGTGTAATATATGCGGCAAAACATCGAGTACCAAATCTAATCATAATAAACATGTTAAGATTCATCACGCCAGAGAACCCGTCACCACCGAGGGATGA
Protein Sequence: MERLVQCPVCTLFLHRGMALEVHLDTHPKDQVIRALCSLSGARPRSEPEEKEREPESPGAPSPSSSSFPSDWGAREQRRAPLHLAFPAFLAPTELSAGALPAPFSFPTGTSCDGKFSSPGRVFAALPSASFRPDLQLRPVLQSPPVRPTVQATIEPRPTPRPPPPPRQANSDAPTDPAAFRPEAAEEPAPGPQLPRPLPSSNSSGAFAGGTFGGVSFRAKAPAAPPPVPSPTAYVYDADVPSREASPRARAEVGESGGRLRGFKILSDVKIERPMRRAPPLDGRRKRPAPTPSSDVDVEADADADADVEDVVSPDSGTAIEAPPRPPSSSPPPSPDFRPTGVFSVIKNVGRTPPTAPETPRAPENPAKRRSPLPAGRGPKPKKLAVKYLKPKIEPPDCPEELPPDVDEDCKPSIARVVQFETELGLRRAFEDPGASRPEAVRPGNVIAFGGPASPAASAASAEGSRFAFSPTRAPLERDSPPPPPPPLPPPPLPSIAGSIGKIEFRSDEIYYSSRRVAAFTFDPGAYAPTAKDAPAQPVGFKVEDPKESFFDASGSSGVPAKEEEAINIRTDERMPPRGELSEQESSGDTDAPWAGMYRDMGGSTSYDLLARESWQSDGSDVEAPLSPQKLAIHENEVEDIPIVVSVKPPDKNYKCATCGKAFNCPKERRVHRTKEHPIGASNIMLERKIRRKQVLLKTNIKIKKERTVKTECVVTTSSVNILRIENENVSTRLDIEPVVPDLKNLEILNNLENKPKLELVKVEGKKKRQDYTCVTCKAEFPSDNLFHEHLKIHPLECLTCGKLFNRRSNLQLHIKRHLGIKNFKCDICEKRFVTKQKLVEHYNIHTGKSPIKCNLCDLTFRRHSNMTQHRNRHHFHIKRRLRDYVCICGEVFHSKKKLAWHKEIHDDKPKACLHCNEKFIHTASLTRHMRRTHNRYFVPDEKRKSENVQCPECNHIYLKSSIDMHMKTHTGMKPYSCVICNKNFTTKWNLKLHKWTHANRSSKPFKCALCKGAFIRHTDYVSHMNSHKSVRPYTCNHCGCQFIRKYNCQRHVKEHENEKKYVCEVPDCGKTFHRSYYLTDHLKVHSGIRPYSCNICGKTSSTKSNHNKHVKIHHAREPVTTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -