Stie003278.1
Basic Information
- Insect
- Stenopsyche tienmushanensis
- Gene Symbol
- Zfy2
- Assembly
- GCA_008973525.1
- Location
- Contig108:328707-336889[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0017 0.099 12.9 0.5 1 23 317 339 317 339 0.99 2 11 0.15 8.9 6.7 0.5 2 23 347 368 346 368 0.96 3 11 0.19 11 6.4 1.1 1 23 372 395 372 395 0.93 4 11 1.8e-06 0.00011 22.2 0.8 1 23 402 424 402 424 0.99 5 11 1.5e-05 0.00092 19.3 0.3 3 23 432 452 430 452 0.97 6 11 4e-05 0.0024 18.0 0.7 1 23 458 480 458 480 0.97 7 11 1.3e-05 0.00076 19.5 2.7 1 22 486 507 486 511 0.94 8 11 3.9e-05 0.0023 18.0 0.2 1 23 519 542 519 542 0.94 9 11 5.9e-05 0.0035 17.5 0.6 1 23 548 571 548 571 0.98 10 11 2.1e-05 0.0013 18.8 0.6 3 23 582 602 580 602 0.96 11 11 0.00038 0.023 14.9 0.4 1 15 608 622 608 624 0.94
Sequence Information
- Coding Sequence
- ATGGCGGAGGCGGTCGGGGCGGCTGCGGCGGTTGCGCCGGAGGCCGAGTGGTGTGGCGCCTGCCTGAGCCGCTCCCGCCTGCGCCGCCTCGTTCCGGGAAGCGACGCTGCCACACTCTTCGCTCAGATCTTAGCTACGAAGAACTACAGCCTTCCAAAATGGATCTGTGGAGGATGCCTTCTTTGTATAATTAAGTTTAATAACTTTAAAGAAAAATGCCGAAAATCACACGACATTACTCTCGCTTTGCTGAACGGTTCTGCCCTCGATGAAAAGACTCGTATGGAGAAACTAGAGAATGAGAGAGAAAATATACTGTCACCACGGCTCTCGCTTTCGAAAATGCTCGTCTTGGATGTGACACGCAATGAAAGGGGAGACAACCTGTGCACAGAAGGTTTCTCGCTGCATTACGATGATACCGCGGGGAGAAACCTCTGCAATGACTTGTTTCCCTTTCGCGAATCAAAATGCGAGATTATCCTACCAAACGCAGTGATTGAAAATGATGATCGTGGACACGGCATGGGCATTTCATTAGAGCGAAACAAAAGAGATGATTTGATTGGTTTTCAAGTAAAATTAGAAGATACGGAAAACATCTATGATGATTTTCGTTTCAACGGTGAAGGAAGCGGGGAAGGAAAGAGCGACGAAGATGACGAGGAGGAGGAAATGTTGTGCGAAAAAAGAAAAAGACGTTCCATAACCGGCGTAGAGACGACCAAGAGATCAAAGAGGCCAAAGAGACAAGGAGACTCAAAACGGAAAAAGAGAAAATCACCAAAAAAATTCATATTCGAAACAAAAGAAAACATCTCAAACGAAAAGTTCAGTAGCCGTATGAAATTGGAGACTGAACAATATAAGGTCATAAAATTGACCCGGGAGGATCTGATCATGGAGAAAATGGCAAACGCACAAAGCGAAAGATACTTAAATGCACCGTACAAGTGTAATTTGTGCATAAAAGGTTTTAATTATGAAGATGTACTCCAAAATCACATGATAAAACATGATCCGAAAAGTGGTCAACTTGAATGTGACATTTGTCATCAATTTTTGCCATCCGCTGTTTCAATGCGTGGTCATAAAAAATCTCATTGCACAAAGTATCAATGTAAAAAATGCGACGTTATCAAAGCATCACGTCAACACTTGCTTGAACATTACATGCTAATTCACGAAGGCGCACCTCGAACTTATGTGTGTAATGTTTGTGGAAAAGCATTAACTAAAAGGACCATGTTTCAGAAACATATGCGAATACATTATCCTTCTAATAAAATTGCTTGTGATAAATGTGGGAAACTCTTTAAGACAATTGAAACTCTGCGAGCGCATATGCTGCGACATGCTGATGTGAAGCGATTTTCGTGCGATCAATGTCCCAAAGCATTTCGATACGCATCCTTGCTCTACACTCACAAAGTGACTCATATAACTACAAAGAACTACTATTGCGTCGAATGCGATATGCATTTTAAAACTCAGTCAAATCTTCGTCTGCATTTAAGAAAATCGCTAAAGCACATTGATCCAAACAGTCTGAGATTTGCGTGTGAACAATGCGATAAACGATATGAAGATGAAAAAAGTCTACGTCGACACATCGAATGGGTGCATCTCAGACAGAAGAATTTCAAATGCGCCAAGTGTGAAATGCAATTCGGATCACAAGACGGCTTGAGAAGTCACATGAAAAAAATTCACGATGGAATTAAACCACCTCGTTCTCATCTCTGTGAAATTTGCAACAAATCATTTAGGGCAAAAGCCGTTCTCATCAAGCACATTAGAGTTCACACTGGGGAGAGACCCTACGAATGTCATGAATGTGGGAAAAAATTCGCTCAAAATTCGAACAATGTCTACTCATATCAAATTAGTTCACCTAAAAATACAAAGACACGTCAATAG
- Protein Sequence
- MAEAVGAAAAVAPEAEWCGACLSRSRLRRLVPGSDAATLFAQILATKNYSLPKWICGGCLLCIIKFNNFKEKCRKSHDITLALLNGSALDEKTRMEKLENERENILSPRLSLSKMLVLDVTRNERGDNLCTEGFSLHYDDTAGRNLCNDLFPFRESKCEIILPNAVIENDDRGHGMGISLERNKRDDLIGFQVKLEDTENIYDDFRFNGEGSGEGKSDEDDEEEEMLCEKRKRRSITGVETTKRSKRPKRQGDSKRKKRKSPKKFIFETKENISNEKFSSRMKLETEQYKVIKLTREDLIMEKMANAQSERYLNAPYKCNLCIKGFNYEDVLQNHMIKHDPKSGQLECDICHQFLPSAVSMRGHKKSHCTKYQCKKCDVIKASRQHLLEHYMLIHEGAPRTYVCNVCGKALTKRTMFQKHMRIHYPSNKIACDKCGKLFKTIETLRAHMLRHADVKRFSCDQCPKAFRYASLLYTHKVTHITTKNYYCVECDMHFKTQSNLRLHLRKSLKHIDPNSLRFACEQCDKRYEDEKSLRRHIEWVHLRQKNFKCAKCEMQFGSQDGLRSHMKKIHDGIKPPRSHLCEICNKSFRAKAVLIKHIRVHTGERPYECHECGKKFAQNSNNVYSYQISSPKNTKTRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -