Stie008545.1
Basic Information
- Insect
- Stenopsyche tienmushanensis
- Gene Symbol
- -
- Assembly
- GCA_008973525.1
- Location
- Contig123:945979-958158[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0047 0.28 11.4 0.9 3 23 161 182 160 182 0.95 2 23 0.99 59 4.2 1.4 2 21 475 494 474 495 0.92 3 23 0.23 14 6.1 0.5 1 21 503 523 503 524 0.95 4 23 2.5 1.5e+02 2.9 0.6 1 23 576 599 576 599 0.86 5 23 0.023 1.4 9.3 1.0 2 21 609 628 608 629 0.94 6 23 8.6 5.1e+02 1.2 0.1 2 23 637 659 636 659 0.88 7 23 5e-05 0.003 17.7 2.1 2 23 681 703 680 703 0.96 8 23 0.38 23 5.5 5.9 1 23 709 732 709 732 0.94 9 23 0.013 0.77 10.1 0.2 1 23 756 779 756 780 0.96 10 23 0.017 0.98 9.7 0.4 1 23 784 806 784 806 0.97 11 23 0.011 0.67 10.3 2.9 1 23 812 835 812 835 0.97 12 23 0.00041 0.024 14.8 1.4 1 23 845 867 845 867 0.98 13 23 0.0019 0.11 12.7 2.0 1 23 914 937 914 937 0.97 14 23 4.4e-05 0.0026 17.8 0.9 1 23 999 1022 999 1022 0.98 15 23 0.0012 0.07 13.3 1.0 2 23 1055 1077 1054 1077 0.96 16 23 0.001 0.061 13.5 0.1 2 23 1083 1105 1082 1105 0.96 17 23 0.0093 0.55 10.5 0.7 1 19 1152 1170 1152 1173 0.95 18 23 0.00012 0.0073 16.4 0.3 1 23 1182 1204 1182 1204 0.94 19 23 0.011 0.63 10.3 0.1 3 23 1310 1331 1309 1331 0.87 20 23 8.2e-08 4.9e-06 26.4 1.7 3 23 1338 1358 1337 1358 0.98 21 23 1.9 1.1e+02 3.3 2.4 1 23 1389 1412 1389 1412 0.94 22 23 6.9e-05 0.0041 17.2 2.6 1 23 1461 1484 1461 1484 0.98 23 23 3.4e-05 0.002 18.2 2.0 1 23 1492 1515 1492 1515 0.97
Sequence Information
- Coding Sequence
- ATGGAAAAACCCCTGCAGTCCATCATCTGCTATAGCCCTTATCAAGCTGAGGTGGACGAAGATGACGGTTTGCCATCGCAGATATGCAAAAAATGCATCAACAACGTCAATAATTGGCACGCTTTTAAGAAAGTATGCGAAGATTCACAAGTGAAGCTCCGCGACTGGTTGAGGGGCGATTCGGCCCCCGAACAATCCCTGGAAGTGAAAGTGAAAAATGAACCCACGTCGGAGGACGATGAAATTCTCATCGATGCATCGTATCCGGGCATCGACGCGATTGAAGAGGGCGGACGTGTGCGGCTGCAGCCCGAAGGACCTCCTATTTTGGCATCATTGGGTCTTGCACCTAGAAGTGAAAAGGAGAGTGACGAAGAGTACAATATTGGAAATGCTCTGACTATGGGGTCAATGGGGTTAGCAACGACAGCTGATGCAGAACACCGTCCAGTACCCGTCGAACAATTAGCGTCAAAGGATTGCTTAGTGTGCGGACGCGCCTACCGTTACTCTCACAATGCACGACGACACGAACGCAACGCCCATTGCTATGACCGCTATACCAACAAAGTGGAATCCGGCTCTCCATCTGCGAGCATTCGATCCATTCCGTACAAATCTAAAGCACGACTTTTGCATAATTCCGGTGAGAACATCAGCTCGAAAACCCCGCCATTGGACGGAACTTATTCGATGAAACGTAAGTTGCTTTCTGATTTTCGAAATAAGGGCGGACAGCCTGAAATTCTTAAATCTCTTCTCACTGCCAGATCTGAAGTTGTCGTTTCCGAATCGGAGAATGTTCATTCGGGATCTGAAAGTCCCGAAACATTCATTTCTGAACCGGAATTACCGCCATACCAAGTAGAAGCGATACTCTCCGTTCCCGATACTTACATGGAGAATTCAGATATGTCCGATGACGATAACGATATGGAGCGATCGCGGATGGATTCTGATGTCGAAGTAGATATAAGTTCACAGTTAGATATAAATAGAATAATTGGAATAGAACAAGATATAGATAAAGATGATTGTATTGCCGAAGAAATGCCACATGATATGGCCGAAGATGAAGGTAATCTTGACGAAGAAGATGAGCACGAATCTCGACTGGAGATTGATACAAGTATAGTACCTGATAGTGAAAATAAACCAAATAATAGTGATGTGACTCATGACGATGTTGATGACGATGACGACGATGATATTCCTGTTCCTATAGTACCAATCGTTGAAATTGACGAAAATCCTCATCCCGATAATTTAGAAAGCGACGAAAGTGAATCAGACGATGAATCTCCAGACGATAATAGGTTGACCGTTGTTGAAAATAATTCCGAAGACAGCTTAACAATTACGTCTGCTCAAAAAGCGTTCATTGTAAAGTACAGGGATTTAATTGAACAGATCAATACGATGAAGTGCAAATGTTGTGATAGAGATTTTCCACGCAGAAAAGCCGTCATTCAACACTTACAGAAGAACGGTTGTAAAATTCCAAAGCACACGTGCTACTCGTGCGTATTGCCGTTTACTCATATCGGTGCTCTACTAAGCCACATGCGGTATAACTGTTGCAATGACACGTGGAAATTGATTTATAGGGAAGACGGAATACCCGATAATATAGTCGTGGATGAGATACCTCCGACTGACATTCAGGATTGCGGCTCGGAGGAAATTCTTAAAACGCAGTACAAGGATATTTTAAGTGCAAGATCTTATTCGTGCAAACTATGTCCGGCTCAATTCCAGCTGAAGCAGTTTATAATGAGACACATATACGATATGCACGAAAGTGCAACGCCTCCGGTACATTTGCAATGCTTTAATTGTAAATATAAATTTATAGATAACAGACTGTGGAAAAAACACGTTCGCAACGGCGAATGTACCGTCAATATTTCTTGCGATTTGTGTTCTGAAAAATTTTTAACGATGCAAGATTTCAACGAACATGCCATATCGGTTCACACCGAAGATTTCGTCAATCAATCGAATGAGAATCATGCTCGCGTGCTGGACGGAAGACCTACGCACTGTCCGATCTGCGATAAGAGTCTCTCAAATTATCACAATCTTGTCAAGCATTTAAAAGTCGTACACAACGAAGATAAACCTCACATGTGTCAACACTGCGATAGTAAATTTGGTCACGTCACCGAATTAAACCACCATATTTACATCGAGCATTCGGAAAGAATGTTAAACGGCGATGACATCGATCTAAGCATAGTCAAGGAGGAAATAACAGCTTATAATTATTCGTGTACTGATTGTTCGGCCGTGTTTGAAACGGTCGACGGTTGGACCGAACATCAAATTAGTGTTCATCATCATATCGCGCACGAGTGCGATCAGTGCGAGAAGAAGTTTTGGGACGAAGGAGAATTGGAGGAGCACAAAAACGTACATTTAAGGGTTAAATTATATAAATGCATGCTGTGCTCTAATTCGTACAGCTCGTCACACAAACTCTCCGAACATATGAATCAATTACATCAAGAATCGACGCCTGAAAAAGCGCAATTTTATTGCGACATTTGTATACGCTCGTTTAAGAGCAGGCAGGCGTTTTCAAATCACATGCGGATCCATGCTAAAGTTCCTACTACTAATCGTCGATCCGGCGAAGTTAAACGCAATCCGGATATTCAGTATAGAACACCAAATCATGTACAGCATCAGCCGCCTCCGCTTCCGGTGAAAACGACTCGTCATTCAGATCAAGCGCCGTATTCTTGTGATATTTGCGGCAAGGGATTTTTACATAAGAAAAATATTTGGAAGCATAAAAAAATGCTACATCCGGATATAATAAATCGGTCGAAGGAAAACATCGGAAGCGTCAATATTAAAAATGCTTCCACCGAAGAGGACGATTATATGAACGACGATCAGTACGGCCGTCTTTCCATACCGCAGTTTGATAGTTTTGTTACTACCGTTTACGATCAACCTGAAAATAGCGGATCTGAAAACGTTTTACTCTACCAATGCGATCTCTGTGATAAAAGATTCGCCGTTAAGAGTAGCATTTGGAAGCATAAAAGGGTCAAACATGGAGTTTTAAACCCCGGCCAGCAGGAAGTTAATAAATATGATCTTATCAAACCGGAATTGAAAACGGAGAATGCCAAATCGGATATAGCTAGAACTAGTTGTACTATTTGTAAAATAAACTTTCCGGATAAAAAAGCATATTATAGACACAGAAAAACGGCGCATAAAGTTAGCATTCAAGTCTGTAAAATATGCGGCATCACTCTAAATACGTCGATGGAGCTTTTTGAGCATTTGCAAACGGCGCACGCTAAAGAACTGTTAGGATATAATGCGAGTCAAGGAAAACCACCAAAATCAATGCTCCCGGTGAGAAGTCAGAATTCAAGTGATGAAGATGATATTTCTCAGGATACTAGCATATCGGATAACCATAAAGATGGCAAATATTCGTGTGAAACTTGCGGGAAAGGTTTCCAGGATATGGTTACATTGCAGAATCATAATTGCCTCCAACGAGTTGCTATATCCGAGACTTACGATTGTGAAATATGCAATAAAAGCTACACATCTATATCGGCTCTCAAAAGTCATAGGGGATGGCATCTCCGTTCTCCCGATGGTAGAGCAGCTTTTAGTAATTCCGGCTTATGGATGCCGCAGAACAAAGTCACAAACAAAGTGAGCAAGCACGAAGTCATTGAAACGACCCCCACAAAATCACCCGTAAAACCTCCACCGCCTCCATTGCCGAAAGAAATGTCACCCATGCAAATCAAGAGGAAACTACCGCCAGACGTTCAAGTCACGGTATTAAAAAAGAAAAAGCTGAACGACGACGTTGTCCTAGAACCGGCCGTCACACCTCGCTCTGAAGCATCGCCTGCGACTCGTCAACTAGCCATCACCGAAGACCGCTACTGCGAACCGTGCGGAAAAATATTCACGAAAAAAGCCGCGTATCAGCGACACGTTGACGAAGTACACAAACCAAACACCGTGTTTTGCCCCATCTGCAACAAGAGCTTCACTAGAAAATCAACGCTCCTCGTGCACATGCGAAAGCATGACACCGGAGACACGTCAGAGCCACCCGACATGGACGACAGCGACGACGATCACGACGATAACGAGGAGATCTTCTCAAAGTTGCAGTCGTTCAGATGCGACATCTGCAACATCCAACATAATTCATTGAAGGCGCTGCACGTTCACATGGGAAAGTATCACGGAACGGGCGACCCGGATAATCCGAGACGTCTCGATTCCGGCGGCGACTCTCGGATAATCGAAGACGGCGTCGTTAAAGAGTATAAATGCGGGTCGTGCAAGGAAGAGTGGGATACCGAGGAGGAAGTGTGGAATCATTCTCATTACCGTTGTACGATTTGTGGTTTATACTTTTCGCAACAACAATATCTCGCGGTGCATACGCGTTCGTGTCACCCCGACAAGGAACCGAGTTTATTTCCGTGCGGGAAATGTGACCGTTTCTACACAAACAAAAGGAGCTTGCAAAGACACTTGGACACATTTCATTAG
- Protein Sequence
- MEKPLQSIICYSPYQAEVDEDDGLPSQICKKCINNVNNWHAFKKVCEDSQVKLRDWLRGDSAPEQSLEVKVKNEPTSEDDEILIDASYPGIDAIEEGGRVRLQPEGPPILASLGLAPRSEKESDEEYNIGNALTMGSMGLATTADAEHRPVPVEQLASKDCLVCGRAYRYSHNARRHERNAHCYDRYTNKVESGSPSASIRSIPYKSKARLLHNSGENISSKTPPLDGTYSMKRKLLSDFRNKGGQPEILKSLLTARSEVVVSESENVHSGSESPETFISEPELPPYQVEAILSVPDTYMENSDMSDDDNDMERSRMDSDVEVDISSQLDINRIIGIEQDIDKDDCIAEEMPHDMAEDEGNLDEEDEHESRLEIDTSIVPDSENKPNNSDVTHDDVDDDDDDDIPVPIVPIVEIDENPHPDNLESDESESDDESPDDNRLTVVENNSEDSLTITSAQKAFIVKYRDLIEQINTMKCKCCDRDFPRRKAVIQHLQKNGCKIPKHTCYSCVLPFTHIGALLSHMRYNCCNDTWKLIYREDGIPDNIVVDEIPPTDIQDCGSEEILKTQYKDILSARSYSCKLCPAQFQLKQFIMRHIYDMHESATPPVHLQCFNCKYKFIDNRLWKKHVRNGECTVNISCDLCSEKFLTMQDFNEHAISVHTEDFVNQSNENHARVLDGRPTHCPICDKSLSNYHNLVKHLKVVHNEDKPHMCQHCDSKFGHVTELNHHIYIEHSERMLNGDDIDLSIVKEEITAYNYSCTDCSAVFETVDGWTEHQISVHHHIAHECDQCEKKFWDEGELEEHKNVHLRVKLYKCMLCSNSYSSSHKLSEHMNQLHQESTPEKAQFYCDICIRSFKSRQAFSNHMRIHAKVPTTNRRSGEVKRNPDIQYRTPNHVQHQPPPLPVKTTRHSDQAPYSCDICGKGFLHKKNIWKHKKMLHPDIINRSKENIGSVNIKNASTEEDDYMNDDQYGRLSIPQFDSFVTTVYDQPENSGSENVLLYQCDLCDKRFAVKSSIWKHKRVKHGVLNPGQQEVNKYDLIKPELKTENAKSDIARTSCTICKINFPDKKAYYRHRKTAHKVSIQVCKICGITLNTSMELFEHLQTAHAKELLGYNASQGKPPKSMLPVRSQNSSDEDDISQDTSISDNHKDGKYSCETCGKGFQDMVTLQNHNCLQRVAISETYDCEICNKSYTSISALKSHRGWHLRSPDGRAAFSNSGLWMPQNKVTNKVSKHEVIETTPTKSPVKPPPPPLPKEMSPMQIKRKLPPDVQVTVLKKKKLNDDVVLEPAVTPRSEASPATRQLAITEDRYCEPCGKIFTKKAAYQRHVDEVHKPNTVFCPICNKSFTRKSTLLVHMRKHDTGDTSEPPDMDDSDDDHDDNEEIFSKLQSFRCDICNIQHNSLKALHVHMGKYHGTGDPDNPRRLDSGGDSRIIEDGVVKEYKCGSCKEEWDTEEEVWNHSHYRCTICGLYFSQQQYLAVHTRSCHPDKEPSLFPCGKCDRFYTNKRSLQRHLDTFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -