Basic Information

Gene Symbol
HIVEP1
Assembly
GCA_008973525.1
Location
Contig367:73081-99185[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.042 2.5 8.5 2.8 1 21 234 254 234 258 0.86
2 17 0.0024 0.15 12.4 0.3 1 21 491 511 491 512 0.96
3 17 2.6e-06 0.00016 21.7 2.0 1 23 1293 1315 1293 1315 0.99
4 17 1.2e-05 0.00074 19.6 5.2 1 23 1321 1345 1321 1345 0.92
5 17 2.2e-05 0.0013 18.8 0.2 2 23 1789 1810 1788 1810 0.96
6 17 0.0031 0.19 12.0 1.4 1 23 1816 1840 1816 1840 0.91
7 17 0.002 0.12 12.6 3.1 1 23 1861 1885 1861 1885 0.93
8 17 0.011 0.65 10.3 5.4 1 23 2166 2189 2166 2190 0.94
9 17 5.4 3.2e+02 1.8 1.4 5 23 2198 2216 2197 2216 0.95
10 17 0.00063 0.038 14.2 0.2 2 20 2223 2241 2222 2244 0.92
11 17 0.0027 0.16 12.2 4.2 1 23 2252 2274 2252 2274 0.98
12 17 0.00011 0.0066 16.6 0.2 1 23 2283 2306 2283 2306 0.93
13 17 4.5e-05 0.0026 17.8 0.4 1 23 2312 2334 2312 2334 0.95
14 17 0.00019 0.011 15.8 4.8 1 20 2340 2359 2340 2362 0.94
15 17 0.011 0.63 10.3 0.4 1 23 2367 2389 2367 2389 0.98
16 17 0.00012 0.007 16.5 2.0 1 23 2395 2417 2395 2417 0.97
17 17 0.0013 0.079 13.2 2.6 1 23 2423 2446 2423 2446 0.97

Sequence Information

Coding Sequence
ATGACGCAACGTCCGAAGTGGCTATTACTACAAGATAAGATGAGATGGTTCAATATTGTTGTCGTTCGCGGAACTCGAGCGCCTTGCCACAGATTCTCCCGTGTATGTTTATGTGGAGATAATTTGTTTGGATATTGTGCTCCAGCGTCGGATGATAATGAGTCGAGAAGTGAGAATCAAAATGACAACCGGGTACAGGTCCTGGAGGACAAACCACGAGAGGAGTTTCATACGTTCAACAATAACAATGACAGTAAATATCTGCATAAGAAGTTCAAAAAAATGGCCTCTGCAACTTCAACGACTGCTCTACAGGAGGATCATACCAATATAAATCGTGTTCCGAGTCTGCACGAGAACGTATCGAACCGTCAGAGTTCTTCTCATCCGTCTTCCTGTCAAGATGCTGTGCACCCCTTCAAGCGGTCCGAAAACCCGGCGATTCTGACGGCGGCTGTGCTGGCGAACAGTTCGCTGTTCAAATACAGTGTCGGTAAAAACAGTGAAACCGAAAATAATGTACAAATTAATCATAAGGATTACTTAGGTGACAGCAATTCGACTGCGATAAGAGACAGTGTGAAAAATAACGTAAACTCTGAATACTGTGCCGGCCAACGACGGCAAACTCTCGGGAGTGATTGTGCCAAACCATCCGTTTTACAAAAACATATCCGCGCTCATACTAATGAGCGACCCTATCCTTGTGTTCCTTGCGGTTTTGCATTTAAAACAAAATCAAATCTTTATAAGCACTGCAGATCGAGATCTCACGCTCTGAGACTGCACGGGACGGAAGAAACGCCCAACAACGAAGAAGACTGGTCCCTCGGATCCGAAGCCGACGCAGCCAACGCGGCCAAGTCGGAATCGGCATGGAGCTCCGACAGAGGAAGCGTCCAAGGAGATCCGTCGGGGGCAAACGAGAATTCTGGCTCGGAATTAATATCATCTGAACGCATTTCACCATCAAATTTGACCAATTTGCAAGTAGATTCTAAACCTAAATCTATATATAAGCCAAAGTTTCATAAAGCTTCTTCATTCTATCAGGAAGAGGAAGACGGACCCCATAAAAGCGTTCTGTCGCCCAATCCTGATTTTTTAAACCGACATATCTCGAAGATAATATCAGACAATGAAGCTATAGTTGATACGATAGATAGTCCTTTTCATAGAAAATATAGTAAGGATAATAGTAATCAGAAACAATCGATGAACGAAAGCAATGCTGATCTCAAAAACGATAATCAGCCTTTAAATTTAACAAAAAATTCAGAAGTACCTGAAGTAATTCAGAGGAAACGATGTTATTCGGAGAGTTTTGCCATGTTGGAGTCGCAAAAAGTCTCTCAACATCCACTAAATCCGGAAAGATCGATCATCAAGGACTTGCTACTCAAAGTTAGAGCTCAAGGTACCGGACTTTTACCTGTGACGAGTGAATCGTACGACGTTCCAGATTCATTGTATGTCTGCTCCTTGTGTCAAATTCCGTATAAAAGTGCGGATAACTTGGAAACGCATAAACGTCATTACTGCAAAGGTGTTACGAGTAATAGTTCAAATAGTGTTTTAAACGGAAACGTTTCAAGTGTAAATGAAATCATGAAATTTTCAAGGCCGGACTTTATGAGAAGTAATTCTGTTCATGTCACTCTTCCGGAAACGTATAGCCCTAATACGTTAGCGAAAATTGCAAGTTCTACGTTGAAGTCGCCCTTTAAACGCGCAAATAAACCTGAAAATTTAGTTATTTTTAAAAGTGATCAAATGGAAGTTGCAACGCCGCTACCGTCACCGGGACCTCTATTGGGAAACACTCGCTTGGTCGACACTCAAAATATTTCGGATGGATTAAGACCTAATTTGTTTTTGTCCGACGAAATGGAAAAACTCACACGGTCATCTCCGATATTGAAAAGAAGATCAGAGTCGCAGTCGAGCGAGAGCATGTCTTCGCTTTCTAAAATCAGTGATGAAGGATATACCCGTTCTGAAATTTATAGTCCGCCCAATAAAATAAGGTGCACTGAAACGCCCACTCTGCGATCGCTAGAAGAATTGTCGTTATCGCCTATGCGTCAAAATGCAACTTCTTTACAAATGTTTGGAGGTGAAGTGAAAATCGTGGATAATGCCGGAGGAACGACGACAATGAGAATTGAACCGACGTCACAGCATTCGCCGACGTTTATCTCGCAAAGCAGAGTATCGCCATTACCATCGGGTCCTGAAACGAGCAGTATTCTCGTACGATCAGGTCTACATTCAGGCGCTACGATCGTACATAATCCTCCGACACCCAAGGAACCCCTACCTTCTCCTCATCCACAAACTCCTAGATTATTAGTTTCCATGGCCCCGAATATATCAACTCCTAATTTGGGTATGGCAGGAATACCAGCACCCAATATTCCTACTTTTCAATTTCCCATCGGTCCTATTACCGCATATAATCCGTTGACTTTACCTGCGCTCAGTCCCGTCGCTTCTCCGAGTGGGGCTACCACTATTCTGCATCGCGGTAAATTGATACCATATGTACCTGGAATGCCCGGACCTAATACTTTAGGGACGTATTCTTCACCATCGCAAAAATTGAACTCAAAGATGAGCAGTTCAATATGTACGTCCAATACTATGTCTATGGATTCTGGAATTATAAGAAGCGAAAAGAATTTTAAAGATAAATTAAAAAATATGAATAACTCTGATGGCGAGTTAAATCTTAAAATGACTGATCTTAAACTTCCTCCCCATGTTAATATGAAGAATTCTATTAATTCATTAAGAAATAATGAACACTTAGATAAGAAAGAGACGTTGAACAAGTATGGCGATATAATTAGTCAGAATAGTCCTGTGTCTAAATCTATTCCTACGATAAAAATGAACTGTTGCGAAAAAACACCTGAAATATTGCAGAAAAATCCCACAAACAATATGGATTTTAATAGCTCTAAAACGATGAGAACTGATTTCAAATCCTTTCAGAAGGTAGATAAAATGTCCGAAGAACATATTGAAAATAAAGCATCGCCTGGCTTTTCTATGTCGAGCGATAGAGAAAAAAGACGCATTATAGGTGCGGAGCAATTTAATTTTGAGAATCTTATATCAAAATCGGAAATTTTAAATAAACCTATCGAATCAGTTCTTCATTCAAAGTCTACGCCCGAGGATAACTCTTCTAAAGCTCCCGAAAGATCCGAAACGTCCTATTTTAAAAAGAGCATAAACGCATCTTCAGTCGGAAGCTTGAAACAGGACAGTCAGAGTTCAAAATTTCTCCGACCGACGACTCTTCCTCTGAAACCGGGCACATTCACACCGAAAAAACACCATGGAATCACCCCGAACTCCAATACTTTGACGCTAATATCTCCAGAAACGCCACGTCCGGCTAAAGCATACGGACAACTATATTTAAATGGCCACGCATATACATATTTAGGATTAAAATGCTCAGCTAAAGTATACTACTGCACGTTGAATAGACCGCAGCCAACATATGTTCCTAATCAGCATGCGCTTTCCATGTACAGCAATTGGCAGGTATGCTCTGAATCTACTCCGCATCCTCTGGGATTAGCGCCGGGGCAAGCAATGGCGCATTATGATTCGCGTCACAGGCCACAGAGCGTTACGGTTTCAAAAATAAAACAAGATCATTTATTGACGCATTCTTCTCAATGGTCCGTAACTGTGCCGAATCAGCAATTGCCAGCGACGTCTGAATCTGATAGAGTCGATGATATGAAGACGCCTTCCACTGAACCATCGTCTGTCACGATTAAAAATGCTAAGAGCCTCGCTGGAGGTTTTGAAAGCAACGAAGAATACACTTACGTTCCTGGAAGAGGTCGTGGACGGTACGTCTGTTCTGAATGTGGAATTAGGTGTAAAAAGCCATCAATGTTAAAAAAACACATCAGAACACATACGGATGTGCGTCCTTTTACGTGTAAACATTGCTCTTTTAGCTTTAAAACTAAAGGAAATCTCACCAAACATATGAAGAGTAAGGCTCATTACAGAAAATGCAGTGAATTAGGTATAAATCCGTTAGAAGGTGTCGACGGTGCTGATATGTCACAAAATATGGGAGATTCCGATGATGATTCTGATACGCATGACGATGGAAATGAAGGCGAAACAGAATCCAGTGACACAGATTCGTGCAAATCTCGTCTTGAACACGAAGCTGCTCATTGTTTGTTATCTTTGTGGGGAGGTCGACCTGCACCTGGACTCCTGTCAACTGCTAGACCCACAACATATCCTTATACTCCAAACAACACAGATATTCCTTCTACATCGGAAGATTCCAAATTCTCAGAGCCACCTGTTACATCTCCACTTAACGAAAACACATCCGTAATTAGAAAACATCCAATTACGCAACAATTGAATTTAAAATCAGACAAATCCTTGATCGCCCGAAGAAGTAATTCTGTGGCTCCTATGGATCTTAGCAAACCGAAAGATTTTAGTAAAAACGATTTAAAAGAAAACAATATGAGACACGAAAAGCCTTTAATGCCGTATCATCCCGAAGATATCTTGACACCCGTTGAAGAACCAGATCTATTGGCATCTCTTGCATTGAGTAGTTCAAAGCTTCCACGAGTTAATAATTGGAATAACGATGAGCCCATGTTCCAAGTATATTTAACGGAAAAGGCTTTACAGGATTCTAGAATCAAGCAGTGCCAATATACAAACGGTCGACTCAGGCAGCATGAAGTGGAATTGGATTCACCGTTTAAAGACAATATGAATTTTAAAAAAGCAGCACCTTTAGAACCCATATCCAATAACCACCAAAAATCAAAAGCTAGAGACTCTTCAGTTATTACTACGTCGTCCATCATATTACAAGCACCGCCGACGTCTGATTCTTTGTCGGAAGCGCAGCCAAACGATAATTCGGGGATTCAAACTTTAGCAGAAATAGCAGCTAATTCTGTTCGGCTCAAGACTCCGCCGGTTGCAAACGTCGTTGAAAAAAAGATTACAAATGCAGTCTCAGAAAAAATGTCAGGAACTGAAAATGCCAAGTTCGTTGCTTCGGAATATTTGAAAGTAGCCTGTGGAAAATCCATGTCTGATCATGAGCCGCATTTGAATAGTGCAATAAACAACAAATCAGATTGTGATTCTGATAATAGAATGAATTTTGAAGAAAGTATTTCGGAGAAAGATTCCGAAATCCAAAAAATGAACGCCGAACATATCGGCGTAGCTCCAAAGGTTGTCGTCGGCGCTGGAGGAGTCGGATTCAAATTAACCACTCCGTCCAGTGAATTTTCTTCGTTAGCTTCTTTTTCAAAAGGTCCTCTCACAGAAGACGGCAGATCAGTTTGCGTCGTTTGCAACAAGACATTTTCAAAACCTTCTCAACTCCTCTTGCATATCAATATACATTACATAGAGAGACCGTTCCGATGCAGCGCCTGCGCCGTAAGCTTCCGTACGCGCGGTCATTTACAAAAACACGAACGATCGGGCTCGCATCACAATAAAGTCTCGATGACCTCGACGTTCGGCGCTGCTACAACGACCAATCCGAGACCTTTCAAATGTTCCGATTGCAAAATAGCGTTCAGGATACACGGACACTTGGCGAAACATCTCCGAAGCAAAATGCACGTAATGCGGTTGGAATGCTTAGGGAAGCTGCCTTTCGGTACCTTTGCCGAGATAGAAAGGGCCGGCGTGAGTCTGACTGATATAGATACAACAGATTGTGATAATTCATTAGCGAGTTTACAAATTTTAGCTCAAAAATTGCACGAAAAAGATCCGACTAAATTAGAAAAATGGGATCCCACGACGATGACTCCGCCGTTGCTGCCGCCCGGACCCGAGTCGTCCGACGAAGAGGAACCCAATAGTCCGTCGCCGCATATTATGAGTTTGGGTGATAACGAATCGAAAATTGTGAACGATAGTGATAGTCCTGATGAGACAAATATCACAATCAATGATCAACTACCGATGCATGTTTGTCAAAAGTGTCGAACTAAGATGATCTCGTTTAACAAATTTGCCATAAAATGCAACGAGAGTCAAATAACTTTGAACGCCATTCTCAACCAAAGTTTGAGTGCGGATAAGGTTTTGGAAAATGTCAAATCTGAAATCAAAGAAGATGATATTTTAGAAGACGTAAAAACTGAATTAGGCGATGATTTTTCTATTAAATCTGAAGATTTTAGTGACAATTGTAATGATGACAATGATGATTTTATTCCAATTTCACAACTGGTAAAAAAGAAATCTCGCAAGAAAAGAACAAAAAATGATTCCATTAAAAGTAAACGAGTTAAAAAAAGTAATTCTTCCATTGAACAGAGCGTAGAAAATTTAGATGATATAAGTCTCATTGATGAAATGAACGGCGAAGATTTAAAAACTTCGGCTGATGATGATATAGAAAGGAAAAAACGGAAAGGCAGAAGCATCATGATCAATAATTCATTTTTTAAGTTTTTTTGTCATGTTTGTTCTGGTCATTTCACAAATTGGTCTGCATTGAAGAATCACACCAAAGAAGATCACCATACAAAAGCAAAAGTCTTGTGCATGTGCGGTAAATATTTATATACTCGTCATGCCATAAACAGACACATAGTGAAGCATGACAAATCAGTCGGAATTAAGTGTGATAGTTGTGATAAGACGTTCTCCAATGAAAAGGCCCTACAAGCACATACACCAGTACATTTACCCAAAGACCAGTATCCTCATGTTTGCAGTCATTGTGCGAAGCGATTTGCCACGATGTTTTCTCTTAAAATACACGAAAGAACTCACATACCAAAAGAATTGAGATATATTCATCCGTGTGAAATTTGCGGCGTTAAGTTTACATCAAAAAGCAGTGTAAAGGCTCACATTAGTGCAGTTCATGAAAAACATCGACCTTTTGTTTGCGACGTGTGCGGACACGCTTTCAATAATAAAGGCAATTTACAAGATCATAGGGTTCTTCACAGTGATGAAAAATTACATTCGTGTCCAAAATGTCCAAAGAGGTTCAAGACTAAGGGAACATTGCAACGTCACCTTGATTGTCACGGTGGTACATCGTACAAGTGTCCCAAGTGTCCGGCTTTATTAAATTCTCGTAGAACGCTTCGCATGCATATGTACGTCCACGAAGACCTCTGTCGTTATATTTGCGCTTTTTGTAATAAAGGATACAAAAGAAGAAAATCTTTGAAATCGCACATGAATCTGCATACGGGTGAACGACCGTATTCGTGTCCGTGGTGCTCAAGAACATTCGCCGATAATTCGAATTGTAGGATTCACAAACGAAGGATGCATCCGACGGAATTAGCGGAATACGAAGCCATTCATGGGAACGCTCATGATGTAACTAAAGACGATGTGGCCGAGGAGAAGAAAGTAATATATAATATGACGTTCAAGCCATATGATACGAGACCGATTGTAGTACCTCAACTCGATGTTAAACCAGATTTAATGAAATCGTTGGAAGAATCAAACCCTTAA
Protein Sequence
MTQRPKWLLLQDKMRWFNIVVVRGTRAPCHRFSRVCLCGDNLFGYCAPASDDNESRSENQNDNRVQVLEDKPREEFHTFNNNNDSKYLHKKFKKMASATSTTALQEDHTNINRVPSLHENVSNRQSSSHPSSCQDAVHPFKRSENPAILTAAVLANSSLFKYSVGKNSETENNVQINHKDYLGDSNSTAIRDSVKNNVNSEYCAGQRRQTLGSDCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRSHALRLHGTEETPNNEEDWSLGSEADAANAAKSESAWSSDRGSVQGDPSGANENSGSELISSERISPSNLTNLQVDSKPKSIYKPKFHKASSFYQEEEDGPHKSVLSPNPDFLNRHISKIISDNEAIVDTIDSPFHRKYSKDNSNQKQSMNESNADLKNDNQPLNLTKNSEVPEVIQRKRCYSESFAMLESQKVSQHPLNPERSIIKDLLLKVRAQGTGLLPVTSESYDVPDSLYVCSLCQIPYKSADNLETHKRHYCKGVTSNSSNSVLNGNVSSVNEIMKFSRPDFMRSNSVHVTLPETYSPNTLAKIASSTLKSPFKRANKPENLVIFKSDQMEVATPLPSPGPLLGNTRLVDTQNISDGLRPNLFLSDEMEKLTRSSPILKRRSESQSSESMSSLSKISDEGYTRSEIYSPPNKIRCTETPTLRSLEELSLSPMRQNATSLQMFGGEVKIVDNAGGTTTMRIEPTSQHSPTFISQSRVSPLPSGPETSSILVRSGLHSGATIVHNPPTPKEPLPSPHPQTPRLLVSMAPNISTPNLGMAGIPAPNIPTFQFPIGPITAYNPLTLPALSPVASPSGATTILHRGKLIPYVPGMPGPNTLGTYSSPSQKLNSKMSSSICTSNTMSMDSGIIRSEKNFKDKLKNMNNSDGELNLKMTDLKLPPHVNMKNSINSLRNNEHLDKKETLNKYGDIISQNSPVSKSIPTIKMNCCEKTPEILQKNPTNNMDFNSSKTMRTDFKSFQKVDKMSEEHIENKASPGFSMSSDREKRRIIGAEQFNFENLISKSEILNKPIESVLHSKSTPEDNSSKAPERSETSYFKKSINASSVGSLKQDSQSSKFLRPTTLPLKPGTFTPKKHHGITPNSNTLTLISPETPRPAKAYGQLYLNGHAYTYLGLKCSAKVYYCTLNRPQPTYVPNQHALSMYSNWQVCSESTPHPLGLAPGQAMAHYDSRHRPQSVTVSKIKQDHLLTHSSQWSVTVPNQQLPATSESDRVDDMKTPSTEPSSVTIKNAKSLAGGFESNEEYTYVPGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCKHCSFSFKTKGNLTKHMKSKAHYRKCSELGINPLEGVDGADMSQNMGDSDDDSDTHDDGNEGETESSDTDSCKSRLEHEAAHCLLSLWGGRPAPGLLSTARPTTYPYTPNNTDIPSTSEDSKFSEPPVTSPLNENTSVIRKHPITQQLNLKSDKSLIARRSNSVAPMDLSKPKDFSKNDLKENNMRHEKPLMPYHPEDILTPVEEPDLLASLALSSSKLPRVNNWNNDEPMFQVYLTEKALQDSRIKQCQYTNGRLRQHEVELDSPFKDNMNFKKAAPLEPISNNHQKSKARDSSVITTSSIILQAPPTSDSLSEAQPNDNSGIQTLAEIAANSVRLKTPPVANVVEKKITNAVSEKMSGTENAKFVASEYLKVACGKSMSDHEPHLNSAINNKSDCDSDNRMNFEESISEKDSEIQKMNAEHIGVAPKVVVGAGGVGFKLTTPSSEFSSLASFSKGPLTEDGRSVCVVCNKTFSKPSQLLLHINIHYIERPFRCSACAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATTTNPRPFKCSDCKIAFRIHGHLAKHLRSKMHVMRLECLGKLPFGTFAEIERAGVSLTDIDTTDCDNSLASLQILAQKLHEKDPTKLEKWDPTTMTPPLLPPGPESSDEEEPNSPSPHIMSLGDNESKIVNDSDSPDETNITINDQLPMHVCQKCRTKMISFNKFAIKCNESQITLNAILNQSLSADKVLENVKSEIKEDDILEDVKTELGDDFSIKSEDFSDNCNDDNDDFIPISQLVKKKSRKKRTKNDSIKSKRVKKSNSSIEQSVENLDDISLIDEMNGEDLKTSADDDIERKKRKGRSIMINNSFFKFFCHVCSGHFTNWSALKNHTKEDHHTKAKVLCMCGKYLYTRHAINRHIVKHDKSVGIKCDSCDKTFSNEKALQAHTPVHLPKDQYPHVCSHCAKRFATMFSLKIHERTHIPKELRYIHPCEICGVKFTSKSSVKAHISAVHEKHRPFVCDVCGHAFNNKGNLQDHRVLHSDEKLHSCPKCPKRFKTKGTLQRHLDCHGGTSYKCPKCPALLNSRRTLRMHMYVHEDLCRYICAFCNKGYKRRKSLKSHMNLHTGERPYSCPWCSRTFADNSNCRIHKRRMHPTELAEYEAIHGNAHDVTKDDVAEEKKVIYNMTFKPYDTRPIVVPQLDVKPDLMKSLEESNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-