Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig049:172581-175880[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0012 0.072 13.3 4.4 1 23 247 269 247 269 0.97

2 11 7.5e-05 0.0045 17.1 3.3 2 23 276 297 275 297 0.97

3 11 8.5e-07 5.1e-05 23.2 3.1 1 23 303 325 303 325 0.99

4 11 2.5e-05 0.0015 18.6 0.8 1 23 334 356 334 356 0.97

5 11 1.5e-06 9e-05 22.4 2.6 1 23 362 384 362 384 0.98

6 11 1.9e-05 0.0011 19.0 7.6 1 23 390 412 390 412 0.98

7 11 4.5e-09 2.7e-07 30.4 0.7 1 23 418 440 418 440 0.98

8 11 2.1e-06 0.00012 22.0 1.6 1 23 446 468 446 468 0.98

9 11 2.8e-07 1.7e-05 24.8 0.3 1 23 474 496 474 496 0.96

10 11 4.1e-06 0.00024 21.1 4.2 1 23 502 524 502 524 0.98

11 11 0.0093 0.55 10.5 2.8 3 23 532 553 530 553 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0012	0.072	13.3	4.4	1	23	247	269	247	269	0.97
2	11	7.5e-05	0.0045	17.1	3.3	2	23	276	297	275	297	0.97
3	11	8.5e-07	5.1e-05	23.2	3.1	1	23	303	325	303	325	0.99
4	11	2.5e-05	0.0015	18.6	0.8	1	23	334	356	334	356	0.97
5	11	1.5e-06	9e-05	22.4	2.6	1	23	362	384	362	384	0.98
6	11	1.9e-05	0.0011	19.0	7.6	1	23	390	412	390	412	0.98
7	11	4.5e-09	2.7e-07	30.4	0.7	1	23	418	440	418	440	0.98
8	11	2.1e-06	0.00012	22.0	1.6	1	23	446	468	446	468	0.98
9	11	2.8e-07	1.7e-05	24.8	0.3	1	23	474	496	474	496	0.96
10	11	4.1e-06	0.00024	21.1	4.2	1	23	502	524	502	524	0.98
11	11	0.0093	0.55	10.5	2.8	3	23	532	553	530	553	0.95

Sequence Information

Coding Sequence: ATGGAAAATTTCAATGCTAATTATGGAATTCCATTCTCCTCAATTTGTAGAACATGTTTAAATACCAAAGAAGATATGAGACCTGTGCATGAAGCTTCCATAGCTGATATGCTTATGTACAGTGCTTCGGTTCAGGTGGTGCACGGGGATGGGATGCCTAATTTTATTTGTTTACAGTGTTTAAGACAAATCAACAGGTCATATTCGTTCAAACAATTGTGCGAAAAATCAGATGCTATATTGAGACAATATGTTTTGGATGGTTTTCTGCCAACTCAGTTGCAGGACCAAAGTGATATGCATATTGAGAAAATAGACATTCCAGGATGTGATGCATCAGCTAAATATTTACGTCAGCAAGAACTTATCCTCACAACATTTGACGATGAAAATGATTTATTAAGACCATCAGAATCATTTGCAAAATTATCTCAACAGCAATCAGAAGATGAGGACACGACAGGTTTTATTGACTGTCCAGAGTTAGATTTGGAACCAGAATGTAATTTGGTAGAAAATGCTTTGGCAGCTTTACAAGAAGACTTAGAAAGAAGAGATGAAATTCCAGATACTGAAGAGTCACAGTGGTTTCAACAAGATGATTTATTAAAGAATTCCAAATCAGATGGGTCTGATTTTAGTAAACTCACAAAATCTAGTAGTTCAACTGCACATTTCAAAAATAAATCAGCAGCACAACTTTACAGAAAAAATGTAATTGATGCATCCGAAAAAAAACACCATTGTTTGCAATGTACGGAAGGATTCACAAATGCTCATGATCTATCAGTGCATATGTCTACACATCCAACTGATGGAAATATTAAATGTTGCATATGCAATAAACAGTTCATTCGCATGAGGATGCTAAAAAGGCACATAAAAATTCATATGTCATGGAAAGCTTATAAATGCCATATATGCTCAAAGGAATTCACGGAATCTGGTTCATTAAATAAACATATCAAAAGACACGAAGGCCTCGTAAAGGAAAAAAACCATGTCTGCGTAACGTGCGGAAAAGGATATCAAGATTCTTATTATTTGGCAATACATATGAGAAAACACACCGGTGAAAAGCCATTTTCTTGCGAACATTGTACGAAATCATTTTCTGATCAGAGACTGCTGGCTTCCCATATTAAATCGCATAATCAAGATAAATCACATCAATGCATGTTTTGTTCCAAAAGTTTTACTCATTCATCGACTCTTACCACTCATCTAAGAACACATACTGGAGAAAAACCTTATATTTGTAATATATGTGGTAAAAAATTCATACAATCATCAAATTTATCATTGCATATGCGAACTCATACGGGCGTTAAACCGTACTTTTGTGGAATATGCAATAAAAGTTTTGCATCATCATCGACGCTCACATATCATTCCAGAACACACACTGGAGAAAAACCATACCTTTGTTCGGTTTGCGGAAAATCTTTTGCAAGATCGGAAGACGTCACACTGCATATGCGAACGCACACAGGTGAAAAACCGTTTCAATGTCCTACGTGTCAAAAAAAATTCACCACTTCTAGTCATAGAAATCAACATATGCTCATCCATTCCGGAGAGAAACCACACTTGTGTCGGATTTGCAATAAGGGTTGTACATCTCTGGCGCAGATAAGACAACATATGCTTAAAGCTCATGGTGAAACAATCGAAAATTCTAGCAAAAACAAAGAAACTAATGATATAAAACCAATCGTGCCAACTAATGATACTGACAAAGAAGAAAAGTTATAA
Protein Sequence: MENFNANYGIPFSSICRTCLNTKEDMRPVHEASIADMLMYSASVQVVHGDGMPNFICLQCLRQINRSYSFKQLCEKSDAILRQYVLDGFLPTQLQDQSDMHIEKIDIPGCDASAKYLRQQELILTTFDDENDLLRPSESFAKLSQQQSEDEDTTGFIDCPELDLEPECNLVENALAALQEDLERRDEIPDTEESQWFQQDDLLKNSKSDGSDFSKLTKSSSSTAHFKNKSAAQLYRKNVIDASEKKHHCLQCTEGFTNAHDLSVHMSTHPTDGNIKCCICNKQFIRMRMLKRHIKIHMSWKAYKCHICSKEFTESGSLNKHIKRHEGLVKEKNHVCVTCGKGYQDSYYLAIHMRKHTGEKPFSCEHCTKSFSDQRLLASHIKSHNQDKSHQCMFCSKSFTHSSTLTTHLRTHTGEKPYICNICGKKFIQSSNLSLHMRTHTGVKPYFCGICNKSFASSSTLTYHSRTHTGEKPYLCSVCGKSFARSEDVTLHMRTHTGEKPFQCPTCQKKFTTSSHRNQHMLIHSGEKPHLCRICNKGCTSLAQIRQHMLKAHGETIENSSKNKETNDIKPIVPTNDTDKEEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -