Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig095:37095-44432[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.19 11 6.4 1.2 1 23 246 268 246 268 0.93

2 16 0.04 2.4 8.5 3.5 2 23 278 300 277 300 0.94

3 16 0.12 7.1 7.0 0.1 3 23 412 433 410 433 0.94

4 16 4.8e-06 0.00029 20.9 1.2 2 23 540 561 539 561 0.97

5 16 0.055 3.3 8.1 1.8 1 23 567 592 567 592 0.94

6 16 0.00071 0.042 14.1 8.0 1 23 597 619 597 619 0.97

7 16 0.00073 0.043 14.0 9.3 1 23 625 647 625 647 0.98

8 16 0.00049 0.029 14.6 0.5 1 23 653 675 653 675 0.95

9 16 6e-06 0.00036 20.6 0.8 1 23 681 703 681 703 0.98

10 16 7e-06 0.00041 20.4 1.1 1 23 709 732 709 732 0.93

11 16 0.047 2.8 8.3 0.2 3 23 757 777 756 777 0.98

12 16 4.1e-06 0.00024 21.1 0.1 1 23 781 803 781 803 0.98

13 16 6.8e-06 0.0004 20.4 0.8 1 23 810 833 810 833 0.95

14 16 3.1e-05 0.0018 18.3 0.2 2 23 841 862 840 862 0.97

15 16 4.4e-07 2.6e-05 24.1 0.1 1 23 868 890 868 890 0.98

16 16 0.00091 0.054 13.7 0.4 1 23 896 918 896 918 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.19	11	6.4	1.2	1	23	246	268	246	268	0.93
2	16	0.04	2.4	8.5	3.5	2	23	278	300	277	300	0.94
3	16	0.12	7.1	7.0	0.1	3	23	412	433	410	433	0.94
4	16	4.8e-06	0.00029	20.9	1.2	2	23	540	561	539	561	0.97
5	16	0.055	3.3	8.1	1.8	1	23	567	592	567	592	0.94
6	16	0.00071	0.042	14.1	8.0	1	23	597	619	597	619	0.97
7	16	0.00073	0.043	14.0	9.3	1	23	625	647	625	647	0.98
8	16	0.00049	0.029	14.6	0.5	1	23	653	675	653	675	0.95
9	16	6e-06	0.00036	20.6	0.8	1	23	681	703	681	703	0.98
10	16	7e-06	0.00041	20.4	1.1	1	23	709	732	709	732	0.93
11	16	0.047	2.8	8.3	0.2	3	23	757	777	756	777	0.98
12	16	4.1e-06	0.00024	21.1	0.1	1	23	781	803	781	803	0.98
13	16	6.8e-06	0.0004	20.4	0.8	1	23	810	833	810	833	0.95
14	16	3.1e-05	0.0018	18.3	0.2	2	23	841	862	840	862	0.97
15	16	4.4e-07	2.6e-05	24.1	0.1	1	23	868	890	868	890	0.98
16	16	0.00091	0.054	13.7	0.4	1	23	896	918	896	918	0.98

Sequence Information

Coding Sequence: ATGAGTGTCCAGGTCGAGGCTAAATTTGGAAAAGTCTGTCGAACATGCTTGTCAGAGGGTATAACGATGAAGAAGATATTTGATTTGGACGGAGAAGCATCCATAAGATACCATGAGATGATTATGTCTTGTACTCAAATAGTGATAAGAGAAGACGATGGACTTCCTTCTCTACTGTGTGAAAATTGCGCAGCGAAGGTTAGCAATCTCTTTTCATTTAAATCTCAATGTGAAAATGTAGATGCTAACCTCAGACAGTATCTACAAGATCCATTACGCGGATTGAATACAAAATCAAATGGTGTTTCGAATTCACTAAAAACTCCCGACAATGAAGAGAATACACTTTTATTTGTTAACATGGATGATTCTCTCGCGTCGAGTGATTGTAATTATTATTTAGAAGATCAAAAAAGGTGCAATAATACTCGTCCAAAAATTAATTCATTTATTAAAAAAGCCATTAACAAAAATAATGTAAGAGGTTTAAACACAAAGAAAAAGAAACTTTTATTGGGGGTGGATAATTTGAGAGTAATGGCTATTAAAAAAAATATTTCAAATGCCTCAATTAAATCTTTAAATAAAAAAGTATCCCAAACGAGAGCCCTGCAATTAAATGAAGAAACCGGCAGTGTTAGTAATGAACAAATAGAATTACCGATTGAAGAAACCCACAATGATATAAAAATGAACAATTCCAAGAAAAATAAACGAGTTTCAAGTGCTGTAGCTTTTCCATGTCGAAAATGTGATTTACATTTTCTCACTTGGGGAGAATTGGATAGACATAATTCTCAACACATGCCTGAAGAATCAAATCAAAAGCTATCGTGTAAATATTGTGGAAAAGTCTTTCTTCATCAAAGGCATATAAACCCACATATAAGAAAGATGCACAGTGATATTGAACGATTCCAATGCGGATATTGTGGTAATCGGTGGAAAGATGTACGAATATTAAAGATCCATTTAACAAAACACTACGATGAACATTTTTCATCGCGATTTGACGATAAGACAAAACAAATCGAAATGAATGAAGATGTACATATAAATAATCTAATAAGTATAGACGATGTTGCAAGTGTACCGAAAGAAGATAAAAATTCTACAGAAAAATTAATTTTAGATTCCCCCGACAATAAAGAGGATCAAGAGATTCTCGATCAAAATAGATCAATCGAAAATACAGTTAAGGACGTATTTTCAACAAAAGCAGACAATCTTATTTGTTATTCTTGTAGGCAATTATTTATTGATTTAGAATCATTAGAGTCTCATATTATAACTACTCATATTGAGTCAGAGAATGTATCATATGGATCTATAAATCTCACAAAATCAACTATAAATAACGCATCTAGTGAATTTGGAAATAACATAGTAGAACCTTCTAAAACCAATACAAACTTTAATTGTACTAGTAGCGATTTTATAGAGGAAAATATAATTGCAATTGGCAATAACAATGATACACCTGAAATAGCTAATTTGAATATTTTGTCATCAATTTCGGAAGAACAAATAGTAGACCAAGTTAAAAATAACGTATCTACTTTTGATGAACACTCCCAAGATTTGTTGCTCATTAAAAATGTGAAAAAGTTTAAAAATAAATGCACTATTTGCAACAAAGTCTTCAAATCGTTGAACGATTTAAAGCGGCACGAAGCCACGCACGATCCCGATAAACCTTTTCATTGTCAGTTCGGAAGATGCCGTTGGTCGTTTGCATCGGAACATGAGCTTGCTGTTCACACAAATGTAAATCATTCCGACGGAACTCACGAGTGTAGATTTTGTCATAAGATTTTCAAACATGCCCGAAATCTTCGTCAACATATGTTACAACATCAATTAACTAAAAGATTTGAATGTAAACACTGTAGTAAAGGTTTTAATCATTTACATCACTTACAAAATCATGAAAGAATACACACGGGTGATTTGCCATTTTTATGTCAAGAGTGTGGTCGAGCGTTTGCAACCAAAGATAGATTGATATTTCATATTCGCCGTCATTCTGATGTTCGCCCATTTAACTGCAACGAATGTGGGAAGAAATTTGTTTCTACCGCAGATTTGAAAGTACATAGCAAAACTCATACAGGTGATCGTCCATATATGTGTTCAGTGTGTGGAAAAACATTTACTGCGCGATATAATTTAAACAAACATTCAAAGGCTCAACACGCAGGCGTAGGTTCAGGGTCTTTAAAAAGCAATAACAAAGGAGGGGATCGGCATGAACAAATAATATCGGCCTGCAATATATGCGGTTTCCTCGCAGAAACTCTTCAACAGCTTGATCAGCATATGAAGACTCACACTTGCCAATATTTTTGTCCTATGTGTCCTAAATCTTTCCCGTTGACCAGCGCTCTTGAAGCTCATATTAAAACGCATTCAATGGGTGACAGATCGCACGCTTGTAATACATGCGGTTGGGCATTTAATCGAGCGGAACATTTAAGGGCTCACATTGCGAGACGACATAGTATCGGAGGACGAACTCTCACTTGCAGTCGTTGCCCGCGCACATTTACACGACTCCCTGATTTAACAGCTCATGCGCGTATACACGATCATCGAAAACCATATATATGCACGGAGTGCGGACGTGGATTTTCACAATCAGGCGCTTTACGAGTTCATTTGAGGATTCATAGCGGTGAAAGGCCGTATATTTGCGGAGTTTGTCATCGAGCGCATCGATCGGCTGGAGCATTGGCAGCTCATATGCGCACTCATAGCAGTAATGTTCCACATACTTCCGCAATATCAACAGAAATTAAAACTGCTGCAGAAAATTCATCCGCAATAACCACTTCTCAAATAAATATGGAATCGACTGAAGTTCCGACTGCGTTAAATGTAATCGACGTTCCTACTACGGTTACGTCTATTAGTTTTCAAGAAATGAACGAAATTAGTGATTCACCGGAAAATTTAAATCTATCTGCCAATTTGAATATGGAGAAACAAATGCCGACTATGACTCTCGATCAGTTAGTCACGAGGGATGAAAATATTAACATCATGCAGACAGTGGATAATAATGGCGAAATAATTTACAACCATAATGAAAACGGACAGTTTAGTTTACACGAAAATATGGAATAA
Protein Sequence: MSVQVEAKFGKVCRTCLSEGITMKKIFDLDGEASIRYHEMIMSCTQIVIREDDGLPSLLCENCAAKVSNLFSFKSQCENVDANLRQYLQDPLRGLNTKSNGVSNSLKTPDNEENTLLFVNMDDSLASSDCNYYLEDQKRCNNTRPKINSFIKKAINKNNVRGLNTKKKKLLLGVDNLRVMAIKKNISNASIKSLNKKVSQTRALQLNEETGSVSNEQIELPIEETHNDIKMNNSKKNKRVSSAVAFPCRKCDLHFLTWGELDRHNSQHMPEESNQKLSCKYCGKVFLHQRHINPHIRKMHSDIERFQCGYCGNRWKDVRILKIHLTKHYDEHFSSRFDDKTKQIEMNEDVHINNLISIDDVASVPKEDKNSTEKLILDSPDNKEDQEILDQNRSIENTVKDVFSTKADNLICYSCRQLFIDLESLESHIITTHIESENVSYGSINLTKSTINNASSEFGNNIVEPSKTNTNFNCTSSDFIEENIIAIGNNNDTPEIANLNILSSISEEQIVDQVKNNVSTFDEHSQDLLLIKNVKKFKNKCTICNKVFKSLNDLKRHEATHDPDKPFHCQFGRCRWSFASEHELAVHTNVNHSDGTHECRFCHKIFKHARNLRQHMLQHQLTKRFECKHCSKGFNHLHHLQNHERIHTGDLPFLCQECGRAFATKDRLIFHIRRHSDVRPFNCNECGKKFVSTADLKVHSKTHTGDRPYMCSVCGKTFTARYNLNKHSKAQHAGVGSGSLKSNNKGGDRHEQIISACNICGFLAETLQQLDQHMKTHTCQYFCPMCPKSFPLTSALEAHIKTHSMGDRSHACNTCGWAFNRAEHLRAHIARRHSIGGRTLTCSRCPRTFTRLPDLTAHARIHDHRKPYICTECGRGFSQSGALRVHLRIHSGERPYICGVCHRAHRSAGALAAHMRTHSSNVPHTSAISTEIKTAAENSSAITTSQINMESTEVPTALNVIDVPTTVTSISFQEMNEISDSPENLNLSANLNMEKQMPTMTLDQLVTRDENINIMQTVDNNGEIIYNHNENGQFSLHENME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -