Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig387:103066-105168[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.7e-06 0.00022 21.2 0.4 1 23 224 246 224 246 0.96

2 13 1.3e-05 0.00079 19.5 3.5 1 23 251 274 251 274 0.97

3 13 0.0024 0.15 12.4 0.2 1 23 294 317 294 317 0.96

4 13 0.0018 0.11 12.7 1.8 1 23 392 414 392 414 0.98

5 13 0.00012 0.0072 16.5 7.6 1 23 425 447 425 447 0.98

6 13 3.8e-06 0.00023 21.2 1.7 2 23 454 475 453 475 0.97

7 13 6e-06 0.00036 20.6 4.4 1 23 481 503 481 503 0.98

8 13 2.1e-07 1.3e-05 25.1 0.9 1 23 509 531 509 531 0.96

9 13 2.1e-05 0.0013 18.8 0.4 1 23 537 559 537 559 0.97

10 13 9.4e-07 5.6e-05 23.1 0.3 1 23 565 587 565 587 0.98

11 13 0.00012 0.007 16.5 0.3 1 23 593 615 593 615 0.98

12 13 1.6e-06 9.4e-05 22.4 2.6 1 23 621 643 621 643 0.98

13 13 0.00069 0.041 14.1 1.8 1 23 649 671 649 672 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.7e-06	0.00022	21.2	0.4	1	23	224	246	224	246	0.96
2	13	1.3e-05	0.00079	19.5	3.5	1	23	251	274	251	274	0.97
3	13	0.0024	0.15	12.4	0.2	1	23	294	317	294	317	0.96
4	13	0.0018	0.11	12.7	1.8	1	23	392	414	392	414	0.98
5	13	0.00012	0.0072	16.5	7.6	1	23	425	447	425	447	0.98
6	13	3.8e-06	0.00023	21.2	1.7	2	23	454	475	453	475	0.97
7	13	6e-06	0.00036	20.6	4.4	1	23	481	503	481	503	0.98
8	13	2.1e-07	1.3e-05	25.1	0.9	1	23	509	531	509	531	0.96
9	13	2.1e-05	0.0013	18.8	0.4	1	23	537	559	537	559	0.97
10	13	9.4e-07	5.6e-05	23.1	0.3	1	23	565	587	565	587	0.98
11	13	0.00012	0.007	16.5	0.3	1	23	593	615	593	615	0.98
12	13	1.6e-06	9.4e-05	22.4	2.6	1	23	621	643	621	643	0.98
13	13	0.00069	0.041	14.1	1.8	1	23	649	671	649	672	0.96

Sequence Information

Coding Sequence: ATGATTGTATTGAATTGCATGAGAATGCGCAGCGTACACATAATGGCGGATGCTTACGTTGTTATGGCCAAGCAAAAGAGAGGGGGAAGGGGAAGGGAGTGTGACGCGCGGACACGATCTCTGTCGAAGTTGGTCGTCTTCACGCTCGAAGCTGTTCGAAATGTTCGCTTCACCGTGTGCCCGAGTGTGACACGATATGAAATGGATGTAAACTTCGACAAGATGTGTCGCACTTGCATGTGCGAAGGAAAAACGATGATTCCGATTTTTCCGATGGCGGACGACGCGCCGAGCTACTCTGACATGCTGATGACGATTACGGCTGTCAGGATCTCGACGAGTGACGAACTGCCTCGCCAGCTATGCGATGCGTGTGCGATATCCCTCGACAGAGCGGTCGCTTTCAAAAAGCTATGCGAGGACTCCGACTCGCAGCTCCATCAGTTCATTTCGGAGAGAACGGCGGAAGCGCTGGCTCATCAAGCCGTCGTGAAGGACGAACTGCAGGCCGAGATTCAATACGAACCAGAAAGCATGGACATGGGTCACGAATACGACGATGAATTTTTCATGTTCAAAGTGGAACCAGAAACTCAGTTGGACGAGAAAACGAGAACCGAAACGGAAGTGAAAGACGATTCCACCAGTCTTATCAAGCGAACGAAGCTCTATCCGTGTCCACTCTGTCGCAAATCTTACTCAAATTCAAAATCGCTCAAAAGACACGCAGCCGTCCATCAAGGTGAGGGTTTCAGGTGCGACCGTTGCGAAAGAAACTTCGCCAGAAGAGATCACCTAAGAAAACATCTACAAAGAGTGCACTCAATCACTGACATAGATGCCGTTATGAACACCATATCGATGAAGCCAACGATGAAATATTATTGCCAGTTCTGTGGTATCGATGTTCCAAATAAGGCATCCATGAATAAGCATCTGAGAGCCCGTCACAGAGACAAACTGCCTAAACACAAAACATGCTCAATAGATGACTTTGATGCATTCAAACTGGAAGGCAGCAGTGAAAATGACGACGACGTCGAAGATGACACGGACGACGAATCAAAGACAATCGGACGGGTAACGACAAGCGGTGGCGGTGCAGTTGCCACAATCAAAGAGGAGAGGACGAACACGGGCGATGGAGAAACGCGACTTGTGCTCGAGGTCACCTACAAGTGCGCATTGTGTAATCTTCAATATGACAATCAACACTCATACGCTGCTCACATGACAAAACATTCCGGACCGCTGCCGAAAGGTCAGACACAGTTCACCTGCACGCTCTGTCATAAAGTATTTCACAAAAGAAAAAATCTCAAGCAACATCTTCTGACGCACAACGAAGAGAAGGCAAACAAGTGCACACTCTGTCATCGAGCTTTCACGAGGCCCGACCAACTGATTCTGCACATGAACAATCACACCGGAAAGAAAAGACATCAATGCTCGCATTGCGACAAGGGCTTTAACATGCTGTCTACGCTAAAAGACCATATCAGAACACACAGCGGAGAGAAACCTTATCTGTGCTCGATATGTGGAAAGGGATTTTCCCAAAATACTAATTTAAAACAGCATCTGATGCGACATTCAGCAATCAAGCCATTTGCATGTCCAACCTGTCATGCGAAATTTGTATCTAAGGGTGAACTTGACGCCCATATAAGAAAGCACACAGGCGAACATCCGTTCGTTTGTGACACATGCGGCGTCGGCTTTACCACCAGTAGCTCTCTCGTGAAGCACAGACGAATCCATTCTGGAGAGAGACCCTACGCTTGCGATCTGTGTCCGCTTCGGTTCACCGCCCTCGGCACGCTCAAAAATCACAGGCGCACCCACACCGGAGAGAAGCCGTTTGAATGCACTCACTGCAATAGAGCGTTCACGCAGAAGAGCGACATGGTATCTCATGTGAGAACCCACACTGGCGAGCGTCCCTACGTGTGTTCCACCTGCGGGGCTCACTATCTTCAGTCGTCTGCTCTAAAAGCGCACATTAAATCTCATCATCCGAACTTGAAACAGACAACGCCAGTGGAGATTGTCATCGCTCCGTTGATGGTGGCCGATTTAACGGAACAGTTTCGATCAGACTGA
Protein Sequence: MIVLNCMRMRSVHIMADAYVVMAKQKRGGRGRECDARTRSLSKLVVFTLEAVRNVRFTVCPSVTRYEMDVNFDKMCRTCMCEGKTMIPIFPMADDAPSYSDMLMTITAVRISTSDELPRQLCDACAISLDRAVAFKKLCEDSDSQLHQFISERTAEALAHQAVVKDELQAEIQYEPESMDMGHEYDDEFFMFKVEPETQLDEKTRTETEVKDDSTSLIKRTKLYPCPLCRKSYSNSKSLKRHAAVHQGEGFRCDRCERNFARRDHLRKHLQRVHSITDIDAVMNTISMKPTMKYYCQFCGIDVPNKASMNKHLRARHRDKLPKHKTCSIDDFDAFKLEGSSENDDDVEDDTDDESKTIGRVTTSGGGAVATIKEERTNTGDGETRLVLEVTYKCALCNLQYDNQHSYAAHMTKHSGPLPKGQTQFTCTLCHKVFHKRKNLKQHLLTHNEEKANKCTLCHRAFTRPDQLILHMNNHTGKKRHQCSHCDKGFNMLSTLKDHIRTHSGEKPYLCSICGKGFSQNTNLKQHLMRHSAIKPFACPTCHAKFVSKGELDAHIRKHTGEHPFVCDTCGVGFTTSSSLVKHRRIHSGERPYACDLCPLRFTALGTLKNHRRTHTGEKPFECTHCNRAFTQKSDMVSHVRTHTGERPYVCSTCGAHYLQSSALKAHIKSHHPNLKQTTPVEIVIAPLMVADLTEQFRSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -