Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig403:973496-977267[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.9e-06 0.00011 22.1 0.2 2 23 166 187 165 187 0.97

2 16 1.2e-05 0.00071 19.6 1.5 1 23 193 215 193 215 0.98

3 16 6.5e-07 3.9e-05 23.6 1.8 1 23 221 243 221 243 0.98

4 16 3.8e-06 0.00022 21.2 3.1 1 23 249 271 249 271 0.97

5 16 3.6e-07 2.1e-05 24.4 1.3 1 23 277 299 277 299 0.98

6 16 3.8e-05 0.0023 18.0 1.6 2 23 306 327 305 327 0.96

7 16 0.00028 0.017 15.3 2.9 1 23 333 355 333 355 0.98

8 16 1.4e-05 0.00085 19.4 0.4 1 23 361 383 361 383 0.98

9 16 5.1e-07 3.1e-05 23.9 0.8 1 23 389 411 389 411 0.98

10 16 9.4e-06 0.00056 19.9 0.3 1 23 417 439 417 439 0.95

11 16 0.00019 0.012 15.8 0.7 1 23 624 646 624 646 0.98

12 16 0.0019 0.11 12.7 0.2 3 23 654 674 652 674 0.97

13 16 4.7e-05 0.0028 17.8 3.7 1 23 680 702 680 702 0.96

14 16 5.9e-06 0.00035 20.6 0.8 1 23 708 730 708 730 0.98

15 16 9.2e-07 5.4e-05 23.1 2.5 1 23 736 758 736 758 0.99

16 16 2.3e-06 0.00014 21.9 1.7 1 23 764 786 764 786 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.9e-06	0.00011	22.1	0.2	2	23	166	187	165	187	0.97
2	16	1.2e-05	0.00071	19.6	1.5	1	23	193	215	193	215	0.98
3	16	6.5e-07	3.9e-05	23.6	1.8	1	23	221	243	221	243	0.98
4	16	3.8e-06	0.00022	21.2	3.1	1	23	249	271	249	271	0.97
5	16	3.6e-07	2.1e-05	24.4	1.3	1	23	277	299	277	299	0.98
6	16	3.8e-05	0.0023	18.0	1.6	2	23	306	327	305	327	0.96
7	16	0.00028	0.017	15.3	2.9	1	23	333	355	333	355	0.98
8	16	1.4e-05	0.00085	19.4	0.4	1	23	361	383	361	383	0.98
9	16	5.1e-07	3.1e-05	23.9	0.8	1	23	389	411	389	411	0.98
10	16	9.4e-06	0.00056	19.9	0.3	1	23	417	439	417	439	0.95
11	16	0.00019	0.012	15.8	0.7	1	23	624	646	624	646	0.98
12	16	0.0019	0.11	12.7	0.2	3	23	654	674	652	674	0.97
13	16	4.7e-05	0.0028	17.8	3.7	1	23	680	702	680	702	0.96
14	16	5.9e-06	0.00035	20.6	0.8	1	23	708	730	708	730	0.98
15	16	9.2e-07	5.4e-05	23.1	2.5	1	23	736	758	736	758	0.99
16	16	2.3e-06	0.00014	21.9	1.7	1	23	764	786	764	786	0.95

Sequence Information

Coding Sequence: ATGGAATCCGTAGATGATAATCAAGAAGATCATATTATAAATTATGATTTGGCCCCCGACACCAAAAATGAAAGCCAAATGAATGTCAAAGACTTACTTCGAGATTTTATTGTAAAAGAAGAATTATCATCCGACGATGAAACACTCAGTATAGCTACACTGAAAAAAAATAAGGATTATAATAATAGAGAGAAAAATAGTATATTTATAAATTGTAAGAGCGAATCTAATGATCCCTCGTATGGCAAAATTAAGAAGAAAAAAGGGGTAAAAAAGCGAGGCAGGCCTAGAAAAAATGCAATTCAAGATGTTAATAATTTAGACGTTGAGAAAAGCACAGAAAACGATGTGAATTTCGATATTTTAACTAGTGAAGAAATAGCACTCGCAGATGAAAATAAAACGTCTCAGAAGAAAGAGAAAAAAAAGGATAAAAAACATAAAAAAGAACTAGTTGATTCAATAAATAAACGCGTTAGAGAACCAGGAGTTTGGCCATGTGATTATTGTGATAAAATATACACTCAAAAAAACGCATTAAAACTGCACATACGGATGCACACCGGTGAAGATTTATTCAATTGCTCTTACTGCGAAAAAAAGTTCTCCGTACAAAGTAAACTAGTATCACATTTAAAAGTGCACACGGGAGAAAGACCGTTTCCGTGCGAGCACTGCAAGAAACGCTTTGCAGATCGCAGCACGCTGATTAAACATGTTAGAATTCACACTGGCGAATTTCTTTTCTGCTGTCAATATTGCGGTAAAAGATTTATTCAAAAATCTGGATACCAAGCCCATCTGAAAATACACACGGGAGTCGACCTTTTCCCATGCGAATTTTGCGGCAAGAAATTTAATAGAAAATCTACGCTTGTATCGCATATTAAAATGCACACCGGCGATAAATTATTACATTGTACCGTATGCGCTAAGGTATTTACGGTGCAAAGTAAATTGATGTCGCATATCAAAACTCATACGGGCGAAAAACCGTTTCAGTGTGATATATGTGAGAGACGCTATACCGAAAAACACACTTTAGTAAGTCACTATAGATTGCATTTAGAAGGTAAGCCATATACCTGTGAAATTTGTGCGAAAAAATTCAGTAAAAAGGTTTCGCTGGATCGTCATATATTAATACATAGCGGCGTTAAACCGTTCACTTGTGAAGTATGCGGGAAAAAGTTCACTCAGAAGAGCCAAATGCAAGCCCATGGTAAAATACACACCGGGGAGAAACCGTTCTTGTGTGACTTTTGCGGGAAAGCATTTCAAAGAAAGGACGCTCTTATTGCACATAGGAAAATACATACTTTGAGCGGATTGATTAATGCCGACGATGGAGAATTGGTAAAATTAGAAGTTACGCCGCTCATTTGTGGCTTGGATGGACGACCTTTATGTCCGCCAGTTATGAATGCTAACGAAAGTAATGAAACGTGCACAAATCAAGATGTAAAAATGAAAGCAGAGATGCCAAATCAAAGCCAAAACAAAATGATTCCCATATCCGAAGTAGAGAAAGAAATATTTGGTTCTTTAGAAAAGGGGTCATTCAGCGTAGAAATAGACTCGGACGCCCAAGACTGCGAAGATTATGTGCCCAACAATAATCCTGCATCCGATTCATCTTCTTCAGATTCGTCTGATTCTTCAACGTCATCTTCGTCATCGTCATCAAGTGACGATAGCTCTTCGGAGGATTCATCTGATGACACCTCTCAAAATAAAGGAGGAGAAAATGTATCAGAAACTATAGGAGTGATGGAACATCCAGAAAAAAATGAAATGGAAGTCGAAGATGCAGAAAACCAGTCGACTGAAGACCATATCAAGAAAAAAATAAGAAAAAAAGGCGATAAATTTCCTTGTTTCATGTGCGGTAAAAAATATGCAAAGAAAAATGGATTGTCAATGCATTTACGTCTTCACACTGGTGAAAAATTAATCGCTTGTGATCATTGTCCAATGGTTTTTGTCGCTCCAAGTAAATATTTATCACACGTCAAGACGCATACGGGAGAGCGTCCTCATGCATGCGATATTTGCGACAAGCGATTTACCGAACGGCATTCGCTTCTTACACATTATCGAATACACGTCGGAGACAAACCGTACGAATGTCCAACATGCCAAAAAAAATTCACGAAAAAGATTTCGCTCGATCGACATATTCTCATACATTCTGGAGAAAAACCCTTTCAATGTGATCTCTGTGAAAAACGATTCACTCAAAAAAGTCAAATGGTAACGCATCAACGAACTCACACTGGAGAACGTCCATTCTTATGCAATTATTGCGGCAAAAAATTCAACAGAAAGGATGCTCTTCAGACGCATAGTAAAATACATACGCTCAAGCATTTGTTAGCCGATGAAAAATTCAGAAGAGGCGGCGGTGCAACTGTGAGAGATAGACCGCTTTTACCAATTTCCAAAATGGAAGAACAAAAACAATAA
Protein Sequence: MESVDDNQEDHIINYDLAPDTKNESQMNVKDLLRDFIVKEELSSDDETLSIATLKKNKDYNNREKNSIFINCKSESNDPSYGKIKKKKGVKKRGRPRKNAIQDVNNLDVEKSTENDVNFDILTSEEIALADENKTSQKKEKKKDKKHKKELVDSINKRVREPGVWPCDYCDKIYTQKNALKLHIRMHTGEDLFNCSYCEKKFSVQSKLVSHLKVHTGERPFPCEHCKKRFADRSTLIKHVRIHTGEFLFCCQYCGKRFIQKSGYQAHLKIHTGVDLFPCEFCGKKFNRKSTLVSHIKMHTGDKLLHCTVCAKVFTVQSKLMSHIKTHTGEKPFQCDICERRYTEKHTLVSHYRLHLEGKPYTCEICAKKFSKKVSLDRHILIHSGVKPFTCEVCGKKFTQKSQMQAHGKIHTGEKPFLCDFCGKAFQRKDALIAHRKIHTLSGLINADDGELVKLEVTPLICGLDGRPLCPPVMNANESNETCTNQDVKMKAEMPNQSQNKMIPISEVEKEIFGSLEKGSFSVEIDSDAQDCEDYVPNNNPASDSSSSDSSDSSTSSSSSSSSDDSSSEDSSDDTSQNKGGENVSETIGVMEHPEKNEMEVEDAENQSTEDHIKKKIRKKGDKFPCFMCGKKYAKKNGLSMHLRLHTGEKLIACDHCPMVFVAPSKYLSHVKTHTGERPHACDICDKRFTERHSLLTHYRIHVGDKPYECPTCQKKFTKKISLDRHILIHSGEKPFQCDLCEKRFTQKSQMVTHQRTHTGERPFLCNYCGKKFNRKDALQTHSKIHTLKHLLADEKFRRGGGATVRDRPLLPISKMEEQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -