Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig165:210158-216658[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.3e-05 0.00075 19.5 2.1 1 23 29 51 29 51 0.99

2 18 3.1e-06 0.00019 21.5 2.9 1 23 57 79 57 79 0.98

3 18 6.3e-06 0.00038 20.5 4.5 1 23 85 107 85 107 0.98

4 18 0.028 1.7 9.0 4.4 1 23 113 135 113 135 0.95

5 18 9.7e-05 0.0058 16.8 3.3 1 23 154 176 154 176 0.97

6 18 2.1e-07 1.2e-05 25.1 1.4 1 23 194 216 194 216 0.99

7 18 2.7e-07 1.6e-05 24.8 1.3 1 23 222 244 222 244 0.99

8 18 2.7e-07 1.6e-05 24.8 0.9 3 23 252 272 250 272 0.98

9 18 0.00012 0.0071 16.5 7.9 1 23 278 300 278 300 0.99

10 18 0.00011 0.0068 16.5 0.2 2 23 483 504 482 504 0.96

11 18 0.0045 0.27 11.5 3.1 1 21 725 745 725 747 0.93

12 18 0.00021 0.013 15.7 6.3 1 23 753 775 753 775 0.98

13 18 6.5e-06 0.00039 20.4 0.2 1 23 781 803 781 803 0.99

14 18 0.0007 0.041 14.1 6.1 1 23 809 831 809 831 0.98

15 18 2.4e-08 1.5e-06 28.1 3.6 1 23 837 859 837 859 0.99

16 18 7.6e-06 0.00045 20.2 1.2 1 23 865 887 865 887 0.99

17 18 2.8e-06 0.00017 21.6 1.3 1 23 893 915 893 915 0.98

18 18 2.1e-06 0.00012 22.0 2.2 1 23 921 946 921 946 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.3e-05	0.00075	19.5	2.1	1	23	29	51	29	51	0.99
2	18	3.1e-06	0.00019	21.5	2.9	1	23	57	79	57	79	0.98
3	18	6.3e-06	0.00038	20.5	4.5	1	23	85	107	85	107	0.98
4	18	0.028	1.7	9.0	4.4	1	23	113	135	113	135	0.95
5	18	9.7e-05	0.0058	16.8	3.3	1	23	154	176	154	176	0.97
6	18	2.1e-07	1.2e-05	25.1	1.4	1	23	194	216	194	216	0.99
7	18	2.7e-07	1.6e-05	24.8	1.3	1	23	222	244	222	244	0.99
8	18	2.7e-07	1.6e-05	24.8	0.9	3	23	252	272	250	272	0.98
9	18	0.00012	0.0071	16.5	7.9	1	23	278	300	278	300	0.99
10	18	0.00011	0.0068	16.5	0.2	2	23	483	504	482	504	0.96
11	18	0.0045	0.27	11.5	3.1	1	21	725	745	725	747	0.93
12	18	0.00021	0.013	15.7	6.3	1	23	753	775	753	775	0.98
13	18	6.5e-06	0.00039	20.4	0.2	1	23	781	803	781	803	0.99
14	18	0.0007	0.041	14.1	6.1	1	23	809	831	809	831	0.98
15	18	2.4e-08	1.5e-06	28.1	3.6	1	23	837	859	837	859	0.99
16	18	7.6e-06	0.00045	20.2	1.2	1	23	865	887	865	887	0.99
17	18	2.8e-06	0.00017	21.6	1.3	1	23	893	915	893	915	0.98
18	18	2.1e-06	0.00012	22.0	2.2	1	23	921	946	921	946	0.96

Sequence Information

Coding Sequence: ATGAGCGATTTAGTTGTGGAAATTTCCAACACAAAGTCGTTAAAAATGGAAGATACCGATTTTAATGTCATCGATGAGAAACCATTCAAATGTGAATACTGTCCGAAAAGTTTTAAATTGAGCTATATACTAAAGACTCATATAAGAACTCACACTGGTGAAAAACCATTTGAATGTAAAATTTGTAGCAAAAAATTCACTCAATCGGGACACTTGATTGAACATTCTAGAACACATACAGGCGAAAAACCTTTTCATTGTACCGACTGCGAAAAATCATACATGAGCGCGTCTCATTTAAAAATACACATGCGTTCGCACACCGGAGAAAGACCGTATTCGTGCAAGTTCTGTTCGAAAACATTCAGTCATCCAAACAGCATCAGATTCCATATCAAACTACACACCGGAGAAGCGTACAAATATTCCTCTGAAGACCGTAAAAATCTTCCCAACAAGCATAAATGTGGTATCTGTGGAACCGGTTTCAAATTTAGTCATGCTCTTAAAAGGCATCTATTCATTCATTCCGGAGAGAAACCATTTATATGCGATCTTTGTTCCAAAGGCAAAAAACCGTACAAATGTGGTATATGCGGACGTGGTTTTACATCTCAATTTTTTCTCACATCTCATATGCGAACGCACACTGGAGAAAAACCGTATCAATGTGAAATATGTTCTAAAAGATTTTCACAAAGGTCTGTACTTGTTCGTCATTTGAGGACACATAATGGTGACAAAAGATACGGTTGTGATGTGTGTAATAAGAAATTTGTCAGTCGATCTGACCTTACAAAGCATATACGGACGCACACGGGTGAACGGCCTTATAAGTGTGAATTTTGCAGTTCGTGCTTTAGTCGCAGCAGTCATTTGACTCGGCATACAAAAATACATTTCGTAAGTAAAAAAACGGCAAAAAAATCCAACTCCAAATCGTTAAACAAAACATCGCTGAGAAGTACCAGTCCAAACTCGGAATTAATCAAGGCTTTGAACGGCACAGACTTAATGACGGACCAAAATGGATTGATTGATTTTGAAAATATATCATCCGTTGAAAATACGCTCAACGAGCCTAGAAATATTGTGCACGAAGAAGGCGTTTGTCTAAACAGTGACAATATGTTCTGCGCGGGGGAATATTGTAAATTTCAAACTCTACCATTTGACGATGCACAAAATAATTTACATATTAAGAGTGATATCCAAAGTGTTTACGGGGAGTGCAATCAATTCGACCACTTTAGTGATATTTATATACATACAGATAGTTTGAACTTCGACGGAGAAAAAATTGATAAATCCATCAGCAGTGATTCTATGAAAAAATTTGCAATTGTTAAAAATACCAGTAAGTGGTTGAACCAGAATTCAAATTGCCATTTGAAAAGTAGCTGCGAGGAAGTGAAGTTGCAAACGGTAGAAAATTGTAATCCGTGGCAATGTGGAATATGCGATATGACGTTTTCAGAACAGGGTAAATTGACTACACATGTCAACAATCATAGCTCCGACGAGCATTCTGTAAAATATACTAAACTGGTAAAAAATCCGATGTCTGGAATACTCGAAGTAAAAGAAGTTATCCCTAGAGAAAAGCCAAAAATTATTCCTAAAGAAGAACTCAAACCAATATTAGATAATTTTTTATTAAACAAAAATAGTAGAAACATTATCCCCAAAGAAAATAAAACACTAGATGAGCTAAAGCTCCATTGTGAATTAAGTTCGTCTTCAAACGTAATAAATAATTTCAACCCGTTTAATGGAAACGCAGTATCAGATGTAGCTCAAAACGTCAGCTATACTAATTTTCAAGTAGGTGAAGTATTAGCATCGTACAAAAGTGATTTCAAAACGGAAAGTGTTTCTGAAAAATCCGACAGTGATATTAATGGAGGATTTTCTAGCGACGATGAAAAGCCTTTAAACGATTTGCAAATCAATCTAAATGAAAATAAAAGTCAAGATAAATCCGAGCAACCAAATAGTAATCTTTATAAAAGAAACAAATTAAAAATATCAAATAGCAGCAATTCTCCAAAATGTACCAAAATCGAAGCCAATCTTCAATCTAATGAGAATCTTTTAGAACCTGAAATTACGTTGTCTGAAAATCCAATTGAAAAAATACCAAAGAAACCGAGGAATAAGGGCGTCAAAGAATTTCCATGCAGCGATTGTCCGAAAATATTCAAATTTTCCCATGCGTTGCTGGTGCATAGTCGGTGTCACACGGGAATACGCCCATTCGTATGTAAATGGTGCAACCAGACCTTCGGTCAAAAATGCCATTTAAAGCAACACGAACGCACTCATACGGGAGAGCGACCTTATGTGTGCTGGCAGTGCGGAGCTTCATTTTCAATAGCAGCTCATCTCAATTCACACATGATGACTCATTCTGGAGAAAAACCTTTTGAATGTGATCTATGCCATAAACACTTTGGAAATAAGATGGGCTTGAAACATCATCAGAATATTCACACGGGAGAAACGCCTTATAAATGCGAGCATTGCGGAAAAGGTTTTCGTCAACCGTCATCTCTAAAAACACATTATCGCACACACACTGGTGAAAAGCCGTACAAATGCGACTTTTGCGCTAGATCATTCGGACAGAAGTCGACGCTGACGGCGCATCGAAGAATACACACCGGAGAGCGACCGTACAAATGCGAAGTTTGTCAGCAAGGTTTCTCTTCGAGGAGCGATTTAAAAAAGCATTATGTCACGCATTCCGAAGATCGTCCATACGTCTGCACCATTACGCCGACTTGCCGCAAAGCATTCAATAGAAATTCTCATCTTAAACGGCATATGGAAACGCATAAAATAGTCGAGAGCATTGAAACCAAAAAAGAAGTTCAAACTTGCACCACAATAATTACCAATGAAGAGTTCATTGTGGAGTATGTCAATGAAATTAACAAGGAACAATAA
Protein Sequence: MSDLVVEISNTKSLKMEDTDFNVIDEKPFKCEYCPKSFKLSYILKTHIRTHTGEKPFECKICSKKFTQSGHLIEHSRTHTGEKPFHCTDCEKSYMSASHLKIHMRSHTGERPYSCKFCSKTFSHPNSIRFHIKLHTGEAYKYSSEDRKNLPNKHKCGICGTGFKFSHALKRHLFIHSGEKPFICDLCSKGKKPYKCGICGRGFTSQFFLTSHMRTHTGEKPYQCEICSKRFSQRSVLVRHLRTHNGDKRYGCDVCNKKFVSRSDLTKHIRTHTGERPYKCEFCSSCFSRSSHLTRHTKIHFVSKKTAKKSNSKSLNKTSLRSTSPNSELIKALNGTDLMTDQNGLIDFENISSVENTLNEPRNIVHEEGVCLNSDNMFCAGEYCKFQTLPFDDAQNNLHIKSDIQSVYGECNQFDHFSDIYIHTDSLNFDGEKIDKSISSDSMKKFAIVKNTSKWLNQNSNCHLKSSCEEVKLQTVENCNPWQCGICDMTFSEQGKLTTHVNNHSSDEHSVKYTKLVKNPMSGILEVKEVIPREKPKIIPKEELKPILDNFLLNKNSRNIIPKENKTLDELKLHCELSSSSNVINNFNPFNGNAVSDVAQNVSYTNFQVGEVLASYKSDFKTESVSEKSDSDINGGFSSDDEKPLNDLQINLNENKSQDKSEQPNSNLYKRNKLKISNSSNSPKCTKIEANLQSNENLLEPEITLSENPIEKIPKKPRNKGVKEFPCSDCPKIFKFSHALLVHSRCHTGIRPFVCKWCNQTFGQKCHLKQHERTHTGERPYVCWQCGASFSIAAHLNSHMMTHSGEKPFECDLCHKHFGNKMGLKHHQNIHTGETPYKCEHCGKGFRQPSSLKTHYRTHTGEKPYKCDFCARSFGQKSTLTAHRRIHTGERPYKCEVCQQGFSSRSDLKKHYVTHSEDRPYVCTITPTCRKAFNRNSHLKRHMETHKIVESIETKKEVQTCTTIITNEEFIVEYVNEINKEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -