Basic Information

Insect: Stenopsyche tienmushanensis
Gene Symbol: -
Assembly: GCA_008973525.1
Location: Contig338:77241-102034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00015 0.0088 16.2 3.0 1 23 437 459 437 459 0.97

2 20 0.018 1.1 9.6 4.2 1 20 465 484 465 487 0.93

3 20 1.9e-05 0.0011 19.0 0.4 1 23 493 515 493 515 0.98

4 20 1.1e-05 0.00063 19.8 4.5 1 23 521 543 521 543 0.98

5 20 4.1e-05 0.0024 17.9 7.0 1 23 549 571 549 571 0.99

6 20 2.6e-05 0.0016 18.5 5.3 1 23 577 599 577 599 0.97

7 20 1e-05 0.00059 19.9 7.1 1 23 605 627 605 627 0.97

8 20 1.4e-06 8.3e-05 22.6 3.7 1 23 633 655 633 655 0.98

9 20 7.2e-05 0.0043 17.2 6.7 1 23 661 683 661 683 0.97

10 20 3e-05 0.0018 18.4 5.3 1 23 689 711 689 711 0.97

11 20 1.9e-06 0.00011 22.1 4.2 1 23 717 739 717 739 0.98

12 20 6.1e-06 0.00036 20.5 7.7 1 23 745 767 745 767 0.98

13 20 7.3e-06 0.00043 20.3 6.9 1 23 773 795 773 795 0.98

14 20 9.2e-08 5.5e-06 26.3 3.4 1 23 801 823 801 823 0.98

15 20 1.2e-05 0.00069 19.7 3.5 1 23 829 851 829 851 0.98

16 20 1.7e-05 0.001 19.2 7.7 1 23 857 879 857 879 0.98

17 20 2.2e-05 0.0013 18.8 5.9 1 23 885 908 885 908 0.95

18 20 3.2e-05 0.0019 18.3 0.6 1 23 914 936 914 936 0.98

19 20 0.021 1.3 9.4 4.3 1 23 946 968 946 968 0.99

20 20 8.3e-07 4.9e-05 23.3 2.0 1 23 974 996 974 996 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00015	0.0088	16.2	3.0	1	23	437	459	437	459	0.97
2	20	0.018	1.1	9.6	4.2	1	20	465	484	465	487	0.93
3	20	1.9e-05	0.0011	19.0	0.4	1	23	493	515	493	515	0.98
4	20	1.1e-05	0.00063	19.8	4.5	1	23	521	543	521	543	0.98
5	20	4.1e-05	0.0024	17.9	7.0	1	23	549	571	549	571	0.99
6	20	2.6e-05	0.0016	18.5	5.3	1	23	577	599	577	599	0.97
7	20	1e-05	0.00059	19.9	7.1	1	23	605	627	605	627	0.97
8	20	1.4e-06	8.3e-05	22.6	3.7	1	23	633	655	633	655	0.98
9	20	7.2e-05	0.0043	17.2	6.7	1	23	661	683	661	683	0.97
10	20	3e-05	0.0018	18.4	5.3	1	23	689	711	689	711	0.97
11	20	1.9e-06	0.00011	22.1	4.2	1	23	717	739	717	739	0.98
12	20	6.1e-06	0.00036	20.5	7.7	1	23	745	767	745	767	0.98
13	20	7.3e-06	0.00043	20.3	6.9	1	23	773	795	773	795	0.98
14	20	9.2e-08	5.5e-06	26.3	3.4	1	23	801	823	801	823	0.98
15	20	1.2e-05	0.00069	19.7	3.5	1	23	829	851	829	851	0.98
16	20	1.7e-05	0.001	19.2	7.7	1	23	857	879	857	879	0.98
17	20	2.2e-05	0.0013	18.8	5.9	1	23	885	908	885	908	0.95
18	20	3.2e-05	0.0019	18.3	0.6	1	23	914	936	914	936	0.98
19	20	0.021	1.3	9.4	4.3	1	23	946	968	946	968	0.99
20	20	8.3e-07	4.9e-05	23.3	2.0	1	23	974	996	974	996	0.97

Sequence Information

Coding Sequence: ATGAGCGCCGGCGCCGGCGCCCCCCCCGTCGGTGTGCCCCAAGAGAACCGGAGGACCCCGCAGAGCCAGCAGCAGCAGGGAGCGCCGACGACCTCCGCGACCGACCTCCGAGTCAACTCGGCGGCGGTCCTCTCCAACGTCGCCAAATATTGGGTCTTCACGAACCTGTTCCCGAGCCAGATCCCGCAGGTCTCCGCGTACGGCCAGCCGTCGGGCGCGCCGAGAGTCGAGAACGGAAAGCCGGCACAGGACGGGCTGATCCAACACGACGCCGGAATGCTGAACGGCGACCCGGGGCTGCTCATGCAGCAGCACGCCCAGTCGGCCCTCGGCCATCCTCAGGGTCTGACCGTCTCTCAGTCGGGAGGCGGCGGATTCTCGCAGCGGATGCCCCTCAACGTTGAACCCGCGCAGAGCGCGTCCGAATCACCCAATGCTATGGAATTAGATGTGGCCGCCGCATTAGGAAACCATAGTCAACAATCCGCGACGGACCAACTGCAGCAGGGTGTTAATAATCAACAGCAATCTTCATCCCAGCACTCTTCCCATCATCATTCTCAAACAAATTCTATTCAGCAAAACCATCATCCGATAATGACAAGTCAACAGCTCGCGTCCAATTCATCAAACCGTCAAGACCATCCTAATAACCAACAGATCCATTTGACTGTGAGCGAAGACGGATTACTGACAGTGGTCGATCAGTCTACTCAAAAAGTACTGGGTACTGCTGCAACTACTGCTACTAAAGATGGCCAAGTTACTGGAGAATTTCAAGCACTCACAGTCCAACAGTTACAACAAATAGTCAATCAGCAGGTTTTAGATGGTGTAGTCAGAATTGAACAGGCGCCAGGAGAAGGTCCCAACATTCTTGTTACACATAATTCAGATGGTACAACCTCCATAGAAACTAGTAATAATATCGGTCAACAAGGTTCCCCTACAAATAAGGAAGAAAAACCCAAAATGCTTGGACATTTTGCAATGCCTGAAATTAAAAGTGATGGAAAACTTGACCTGAAAGTCGGACAAATGATGGATGTACGAACGGCAGACGGCTCTATTGTTAAAATTACTGCGGGCCACATTGGAGCCTCAGCAGGCAGTGAACAAGATCTTCAAAATATGTACAAAGTGAACGTTGAAGATTTATCACAACTGTTAGCATATCATGAAGTGTTTGGAAAATTAAATAGTGAATCTAATGTGCCCAAGGCAATGTCTGAATCTGAAGCTGAACCTGGAACGAGTAATTTGTCAGAAGCCGACAATAGTCCACCGTCCATTGGTTTAGGTGTTCCACATTCCTGTGAACTTTGTGGAAAAATGTTTCAATTTCGTTATCAGCTTATTGTACATAGGAGATATCATGCTGAGCGAAAACCATTCACTTGTCAAGTTTGTGGACAGTCATTTACGTGTGCAGATGATCTTACAAGACATGGAAAATGTCATTTGGGTGGTTCTATGTTTACTTGCAGTATTTGCTTCCAAGTTTTTGCAAATGCTCCTAGTCTCGACCGGCACATGAAAAGACATTCTCAAGATAAACCATATAGCTGTTCTACTTGTCAGAAATCATTTGCACGAAAGGAGCACCTCGAAACACACTTTAGAAGTCATACGGGGGAAACTCCTTATAGATGTCATCTATGTTCAAAAACTTTCACTCGTAAAGAGCATATGGTGAATCATGTGAGGAAGCATACAGGTGAAACTCCGCATCGCTGTGATATTTGTAAAAAATCTTTTACTAGAAAGGAACATTTCATGAATCATGTTATGTGGCATACAGGTGAAACACCTCACCATTGCCAAGTGTGCGGTAAAAAATATACTCGCAAAGAGCATCTGGCAAACCATATGCGCTCGCATACGAACGATACACCGTTCCGATGCGAGATTTGCACCAAGTCCTTTACGAGAAAAGAACACTTCACCAATCACATCATGTGGCACACCGGTGAAACGCCTCATCGATGTGATTTTTGTTCTAAGACGTTCACGCGTAAAGAACATCTGTTGAATCACGTGCGTCAACATACGGGTGAATCGCCTCACCGTTGCGCGTACTGCTCCAAGTCTTTCACCAGGCGGGAGCATCTGGTCAATCATGTACGACAGCACACGGGAGAGACTCCGTTTCGCTGCACGTACTGCACGAAAGCCTTCACGAGAAAAGATCACCTCGTAAATCATGTCAGACAGCATACGGGAGAATCACCACACAAGTGCACTTATTGCTCTAAGTCTTTTACGCGAAAGGAGCATCTTACGAATCATGTAAGACAACACACTGGAGAATCCCCGCATCGATGTGCGTATTGCTCAAAATCTTTCACAAGAAAGGAACATCTCACAAACCATGTCAGGAAACACACGGGAGAGACTCCATACAATTGCAGCTATTGTCCTAAGGCTTTCAGCAGGAAAGAACATTTAACCAATCACATCAGGAAACACACGGGAGAGACCCCATACAGCTGTACATACTGCATAAAGTCTTTCAGCCGAAAGGAACATTTAAACAATCATGTCAGAATTCACACTGGGGAGTCTCCACATCGCTGCGAGTTTTGCCAAAAGACTTTCACAAGAAAAGAGCATTTGACAAATCATCTGAGGCAACACACTGGAGATACGCCTCATTGCTGTAACGTTTGCAACAAACCGTTCACAAGAAAAGAACATTTAATAAACCATATGGCGCGATCACACACAGGAGAGCGTCCATTTACATGCGAAGAATGTGGAAAATCTTTTCCATTGAAAGGTAATTTGTTATTCCACCAACGTTCACACAATAAAGGAACATTAGCTGCAAGACCTTATCGGTGTGATCTTTGTCCAAAAGATTTTATGTGCAAAGGACATTTAGTATCGCATAGACGCTCGCACACTGGTGAAAGACCTCATTCGTGTGAGCAATGTGGCAAAACATTTGTCGAAAAGGGCAATATGATTCGTCATATGCGAAAACACGAAGCGGAAGACGGAACCGGAAGTATAGCGAGCGACGTGACCGAAACGACTCCCACCGCTACTCCTATGGGACCGGCCACACCCGTGTCTGAATCTCCGACTGCCCAACAGAATCCATCCCTCATGCAAATGGCAGGACAGATGGAGATACAGGACAGCGAACAACAGCAGTTCTACATCACCAAGGACAACAACCTTCGATGCCCCATCACACAGTAG
Protein Sequence: MSAGAGAPPVGVPQENRRTPQSQQQQGAPTTSATDLRVNSAAVLSNVAKYWVFTNLFPSQIPQVSAYGQPSGAPRVENGKPAQDGLIQHDAGMLNGDPGLLMQQHAQSALGHPQGLTVSQSGGGGFSQRMPLNVEPAQSASESPNAMELDVAAALGNHSQQSATDQLQQGVNNQQQSSSQHSSHHHSQTNSIQQNHHPIMTSQQLASNSSNRQDHPNNQQIHLTVSEDGLLTVVDQSTQKVLGTAATTATKDGQVTGEFQALTVQQLQQIVNQQVLDGVVRIEQAPGEGPNILVTHNSDGTTSIETSNNIGQQGSPTNKEEKPKMLGHFAMPEIKSDGKLDLKVGQMMDVRTADGSIVKITAGHIGASAGSEQDLQNMYKVNVEDLSQLLAYHEVFGKLNSESNVPKAMSESEAEPGTSNLSEADNSPPSIGLGVPHSCELCGKMFQFRYQLIVHRRYHAERKPFTCQVCGQSFTCADDLTRHGKCHLGGSMFTCSICFQVFANAPSLDRHMKRHSQDKPYSCSTCQKSFARKEHLETHFRSHTGETPYRCHLCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRREHLVNHVRQHTGETPFRCTYCTKAFTRKDHLVNHVRQHTGESPHKCTYCSKSFTRKEHLTNHVRQHTGESPHRCAYCSKSFTRKEHLTNHVRKHTGETPYNCSYCPKAFSRKEHLTNHIRKHTGETPYSCTYCIKSFSRKEHLNNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGDTPHCCNVCNKPFTRKEHLINHMARSHTGERPFTCEECGKSFPLKGNLLFHQRSHNKGTLAARPYRCDLCPKDFMCKGHLVSHRRSHTGERPHSCEQCGKTFVEKGNMIRHMRKHEAEDGTGSIASDVTETTPTATPMGPATPVSESPTAQQNPSLMQMAGQMEIQDSEQQQFYITKDNNLRCPITQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -