Basic Information

Gene Symbol
CDC5L
Assembly
GCA_008973525.1
Location
Contig406:586201-591584[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7e-17 3e-14 52.6 1.8 2 46 5 50 4 50 0.97
2 2 4.3e-12 3.5e-09 36.4 0.1 1 45 56 99 56 100 0.93

Sequence Information

Coding Sequence
ATGATAAAGGGTGGCGTTTGGCGAAACACAGAGGATGAGATTCTCAAAGCGGCTGTTATGAAATATGGCAAAAATCAATGGTCTCGTATTGCTTCCCTTCTTCATCGTAAATCAGCCAAACAGTGTAAAGCTCGTTGGTATGAGTGGCTCGATCCAAGCATCAAAAAGACGGAATGGTCACGCGAAGAAGATGAAAAATTACTTCATCTGGCCAAACTCATGCCGACTCAATGGAGAACAATCGCACCAATCATCGGTAGAACTGCAGCCCAATGTTTGGAAAGATATGAATATTTACTTGATCAAGCCCAGAAGAAAGAAGAAGGCGATGATATGAACGACGATCCGCGGAAACTTAAACCTGGCGAAATTGATCCAAATCCAGAGACCAAACCTGCGAGACCTGATCCCAAAGATATGGATGAAGACGAGCTTGAAATGTTATCGGAGGCACGTGCGAGACTTGCAAATACGCAAGGTAAAAAAGCAAAGCGAAAAGCAAGAGAAAAACAGCTCGAGGAAGCGAGACGTTTGGCTGCGTTACAAAAAAGGCGTGAATTGAGCGCAGCCGGAATTTTGGTGTCTATGAGACACAAAAGAAAGCGAGGAATAGATTATAATATGGAAATTCCGTTTGAGAAGCGTCCAACGCTGGGTTTTCACGATACCACCAATGAAATCATTGATCCGATGGCACCGGATTTCTCTAAACTGCGTCAACAACATCTTGACGGAGAATTGAAATCTGAGAAAGAAGAAAGAGATCGTAGGAAGGATAAACAAAAATTAAAACAACGCAAGGAAAATGATATTCCAGCATCTATGCTATCGGGCGAACAGCCTGCCAGGAAAAGAAGTAAATTGGTATTGCCGGAACCACAAATTTCTGATCAGGAATTGCAACAAGTCGTTAAATTGGGTCGCGCTAGTGAAATTGCTCGTGAAGTCGCCGCAGAAGGCGCTGGCGGTGAAAATAATCCGACAGACAGTTTATTAGCCGATTATGCCATTACACCTCAACACGCTACAGCTGCAAGGACCCCTGCTCCACAAACTGATCGAGTACTTCAAGAAGCACAGAATATGATGGCTTTGACACACGTCGATACACCTTTAAAAGGTGGTTTAAACACTCCATTATACAATCCAGATTTCAGTGGTTCTTTACCACAAAGTCAGACAGTCGCCACTCCAAATACTGTCCTTGCGACACCATTCCGATCTGTAAGAAGTGAAGTTTCTACACCTGGAAGCTTTGGGACGCCGATTAGTCAAGGACCTGCCGGAGGCCCGGGGCTTACACCTGGATTAAGAGACAAACTTAATATAAATCCGGAAGAAAGATTATCAGTGGGTGAAACTCCACAACAAGTTCATCACTATCAAAAACAATTGAAAGCATCATTACGAGCGGGATTATCGTCTTTACCGGCACCTCGTAATGATTACGAGATAGTAGTTCCCGATAATGAATCAGAAGAGGTCGTCGACGAAGGACAGACCAACATAATAGAAGATCAAGCCGATTTAGATCTCAAGAGAGAGAAAGATTTGGAAGAGAAACGGGCTGCAGCTTTCGCTTTAAGATCGCAAGTTGTTCAACGAGCATTGCCAAGACCGGCGGACATCAATATGTCTGTGTTGCGATCTCGTGCCGATAATACGCCGTTAACTGATCTTCAAAAGGCCGAAGAATTAATCAAACGAGAAATGGTCACCATGCTGCATTATGATTCGCTAAAAAATCCTCTTCCAAATATTGAAAAAAAACGACAAGTGAATCAACAAGCATCACATTTGGCATATCTAGAACAATGGCCTTATGAAGATATTTCTCCAGAGCAGTTGCGGGAAGCTAGGAATGCATTGAATAAAGAAATGGACGTCGTAAAACAAGGGATGGCACACGGAGAGCTCAGCATTGAAGCATACTCTCAAGTGTGGGAAGAGTGTTTAGCGCAGGTTTTGTTTTTGCCCAGTCAAAACCGATATACTAGAGCTAATCTTGCAAGTAAAAAAGACAGATTGGAATCAGCCGAAAAAAGATTGGAACAGAATCGAAGTCACATGGCAAAGGAAGCCAAAAGATGCTCAAAGATGGAGAAAAAACTCAGAGTTCTCACTGGAGGCTATCAGAGTAGAGCGCAGGCTCTAATTAAACAATATCAAGAATTAAACGATCAACATGAACAAGCTCACTTGGAGTTGAGTACGTTCAAATTTTTAGCAGAACAAGAAAAGGCTGCCATACCAAGAAGAATCGAGTCATTGACAGAAGATGTCGCCAGACAAACTGAGCGCGAAAAGCTTTTACAGAAGAGATATGCCGAACTTCAAACTGAATTGGAAGTTTACAAAAAGTAA
Protein Sequence
MIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDMNDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGILVSMRHKRKRGIDYNMEIPFEKRPTLGFHDTTNEIIDPMAPDFSKLRQQHLDGELKSEKEERDRRKDKQKLKQRKENDIPASMLSGEQPARKRSKLVLPEPQISDQELQQVVKLGRASEIAREVAAEGAGGENNPTDSLLADYAITPQHATAARTPAPQTDRVLQEAQNMMALTHVDTPLKGGLNTPLYNPDFSGSLPQSQTVATPNTVLATPFRSVRSEVSTPGSFGTPISQGPAGGPGLTPGLRDKLNINPEERLSVGETPQQVHHYQKQLKASLRAGLSSLPAPRNDYEIVVPDNESEEVVDEGQTNIIEDQADLDLKREKDLEEKRAAAFALRSQVVQRALPRPADINMSVLRSRADNTPLTDLQKAEELIKREMVTMLHYDSLKNPLPNIEKKRQVNQQASHLAYLEQWPYEDISPEQLREARNALNKEMDVVKQGMAHGELSIEAYSQVWEECLAQVLFLPSQNRYTRANLASKKDRLESAEKRLEQNRSHMAKEAKRCSKMEKKLRVLTGGYQSRAQALIKQYQELNDQHEQAHLELSTFKFLAEQEKAAIPRRIESLTEDVARQTEREKLLQKRYAELQTELEVYKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01007301;
80% Identity
-