Basic Information

Gene Symbol
Kdm5
Assembly
GCA_008973525.1
Location
Contig178:683770-705521[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.6e-24 1.9e-20 72.8 0.0 2 89 92 175 91 175 0.93
2 2 6 1.5e+04 -3.9 0.0 31 67 1315 1352 1303 1363 0.67

Sequence Information

Coding Sequence
ATGGGCCGCTGCGAAGAGGCGGCGGAGGGCGCCGAGGGCGCGGCCTTCCTCTTCACGGTGCCCCCGGAGGCGCCGGTCTTCACGCCAACGCCGGAGGAGTTCCGCGATCCCCTCGCCTACATAAGCAAGATTCGTCCTCACGCTGAGAAGTCCGGCATCTGCAAGATCAAACCTCCTGCGAATTGGCAACCACCATTTGCTGTGGACGTGGACAAACTGAAATTTACTCCACGAGTTCAACGTTTAAATGAATTGGAGGCTATTACTCGTGTCAAGTTGAACTTTTTAGATCAAATAGTAAAATTTTGGGAGCTTCAGGGTTCACTTGTAAAAATTCCTACAGTCGAAAGAAAACCTCTAGATCTTTATTCCCTGCACAAAATTGTAAAAGAAGCTGGTGGATTTGATGTTTGTACCGCTGAACGACGATGGTCAAAAATAGCAGTGCGTATGGGTCATCCGCAAGGCAAAGGAGTCGGATCTATTCTCAAAAATCACTACGAAAGAATTCTATATCCTTATGATTTATTTAAAAGTGGCGAAGCCGGTGAAACCAAAATTGAAGTTAAGAATGAAGTCACACCTGAAAAGGCTAATATGTCAGGCTGTAAAGGAAGGGGTTCTGCTCAAAAAGTTCCATCTCAATCACCAGTTCACAATGAAAATAAACCTTCCACGCGAAGATGGAAAAAACAAAACGAACAAGACGCTGAGAATGAAAGCAACCAGGCAGAAGGAAATGAGGGATCTGATAAAAAGAAAGATCTCCGGCGAACTCAGGCTGTCAAATCTTCAGAAATTGACGATAAAAAATCAGTCCTACGCGATTCTCCCAGTAAACGAAGAGCAGCATCGCTAGCGTCAAACCCTCCCAGAATGGCGTCGTGTCCCGGTATCGCTAGCATGAGACCAATGCGATCAACTGCCAATCGTTCATCGAGCTTACAAGCTAAGCGTCAAGTCAGTATGACGGTCAATGTTGTACCAGCTCTTCCAGATACGGAAAAGGCTCCAGTTGATCCCTTAGCCAAATACATTTGCCACAATTGTGGTAGAGGTGATATTGAAGAACAGATGTTATTGTGTGATGGTTGCGATGACTCTTATCATACATTTTGTCTGATGCCTCCTTTGGGAGACATACCTAAAGGCGATTGGCGATGTCCGAGGTGTATAGCTCAAGAGGTTTCAAAACCGACGGAAGCTTTTGGATTTGAGCAAGCACAGAGAGAATATACTCTTCAGCAGTTTGGGGAAATGGCTGATCAATTTAAGTCTGAATATTTTAACATGCCAGTGCATTTGGTACCTACGCAAACAGTTGAAAAAGAATTTTGGAGGGTTGTATCATCTATAGATGAAGATGTTACTGTGCAATATGGTGCTGATCTTCATTCCATGGACCATGGTTCAGGTTTCCCTACAAAATCGAGTTTACATTTATATCCGGGCGATCAAGAATATGCAGATTCAAGTTGGAATTTAAATAATTTACCACTTTTGGAAGGGAGCGTTCTGGGTCACATTAATGCTGATATTTCTGGAATGAAGGTACCTTGGATGTATGTTGGTATGTGTTTTGCTACCTTTTGCTGGCACAATGAAGACCATTGGAGTTATTCCATTAACTATATGCACTGGGGAGAACCAAAAACATGGTATGGAGTTCCGGGATCTAAAGCTGAACTCTTTGAAACAACAATGCGATCTGCTGCTCCAGAACTCTTTCAATGGCAACCAGATCTGCTTCATCAACTAGTTACCATTATGAATCCTAATATATTAATGCAAGCTGGTGTTCCCGTTTATAGAACCGATCAGAATGCAGGAGAATTTGTGATAACTTTTCCTAGAGCTTACCATGCCGGATTTAATCAAGGATACAACTTTGCAGAGGCTGTTAATTTTACGCCAGCAGACTGGCTGAAAATTGGACGAGAATGCATAACTCATTACTCTAATTTGAGGCGTTTTTGTGTATTCTCTCACGATGAGCTGGTGTGCAAGATGGCTTTAGAAGCTGAGACTCTAGAAGCAACGGTTGCTCTAGCTACGTATCAAGATATGAGAAACATGCTGAATGACGAAAGAAAGTTAAGAAAAAGTTTATTGGAATCGGGAGTTACTGAGGCTGAACGAGAAGCATTTGAACTACTTCCTGACGACGAAAGGCAGTGTTCGTTTTGCAAAACCACATGCTTTTTATCAGCTGTTACGTGTCCTTGTACTGAAAATCTTGTCTGTCTCCGGCATTACTCATCGCTTTGCACGTGCTCATCATCAAAACATAAACTCAGATATCGCTACACACTAGACGAGCTTCCCATGATGCTAGAAAAATTAAAAAGAAGATCTGAAACGTTCCGCGAATGGGCAGATGCTGTATCCAATGCACTGGATCCCGACACACCGAAGAGCTGTGATCTTGAAGGCTTGAGAGTTCATTTGAAGAAAGCGCAAGATTTAAAAATGCAAAAGTCTGATTTAATACGGGCACTCGAAGTTGCCATTGAAGATGCAGAGAAATGCGCATCAGTTATTCATCAGCTAGATTTAAATAAAATGAGGACAAGAACGCGGCACAGTGCAGATCTCAAATACCGCCTTACAGTAGAAGAATTGACACTATTTTGTGAAGAAATAGACGGCCTTGCATGCGTATTGCCTGAAGGTTCTGCTGTTAAAGAAGTTTTACGTCAGACAATTGAACTAGAAAAGTCAGCGGAGGCATTACTTGCTATTGAGGCTGGTTCTTTAGGAGCACCATCAAGAATCAAAGAATTGGAATTATGCGCTGAGAAAGGCTCTGCTCTTTGTATCCAACTTCCATGCTTACCACTCATCATGAACAGACTCCAACAAGAAAAATATCTAGAGGAAGTGAAATTACACAGAGAGGATTATGAATCTTTGAATATTGAAAAAATGAATAAACTATTGGAACAAGGAATAAAGCTTCAACCTAATTATCAAGTAGAAGCCCAACTTGCGTATCTTCAAGATTTGAAAAGTGAAGTTGAAAAATGGGAAGTCAAGGCGAAAATAATACTCGGTTCTGATTCTGATCATCATTCATTAGAAGAAACAGAAACATTATTACGAGAAGCCGACGGCATTGAAGCTTTACTACCCAGCAAGCAGCAATTGACGAATGCAGTTACTCAAGCCAAAGATTGGCTTCAAAAGGTGGACGAAATGAGATCCAAAGAATCGTATCCATATTTTAGTACATTAGAGGCTTTGGTAAAGAAAGGCTCTGCCATTCCCATTAATTTATACGAAAAAGATATGCTTTCAAGTGCTCTCGATTCTGCACAACAGTGGAAGGAGCGAACTGCAGAAACTTTCTTAAGGAAAAATTGGATGCATGGACTTATGGAAGCCTTGAGTCCTCGAACCGATATATTGACAAGTACACGAAAAGTCAGTAACAGTCAAGGAGGACGACAGACGCCAAATAATAAAAATTCGAGTCTTTCAAATTCGATAGCGAGTTTAGTTATTGGCACACCATCAACGCTGGAAGCTGAGAATTTTATGCGAAATTTCAGTGAAGAACGAAGCCCTACACAGATAGTAGCTGCATTTAAAGCGGCTGAGGAAATAGAACTATCTAATATGAGAGAACTTCGGGCTCGTAATTTACGAAAAGATGTCCGAGTTCAGCAACCCGGTACTTCATTTTGCCATTGTCAAAAACGTCAATACGGTTTAATGACACAATGTCAACTTTGCAAAGAATGGTTTCATGCCATTTGTATTCATAATAAAAATTCAGAAACTGGTCCACCTACTCCACCTTTGTCTGATCCTTCGTCGCCGGAACAAGAACCTCTGTCTCCTGGATCTCCCACGTCTAATGGCCCCGGTTCTAGTCGATATCTTTGTAATAACTGCTTAAGAACCCGAAGACCGCGTTTGAACACAATTCTCGGTCTATTAGTATCGTTACAAAAGTTACCAGTTCGTTTGTGTGAAGGAGAAGCCTTGCAATGTCTTACGGAAAGAGCCATGGCTTGGCAAGATAAAGCTCGTAATTTAATGAACAATAAAGAAGCGACCCGCGCACTCGCAGCACTCAACAGTGAAAATTTAGCCTCACAGAATATCGCAAAATCTGAAAAAATATCACCAGAGATTAAAAAAGGTGCTAAAAACGCTGATTCTCAACAATATGGTTCTGGCAGATCTAATTCGCCATCTGATCCTGTTCATAACAGAAACTGTTCGGCTTCAGAACATGCATATTCTGCTTCACCTCAAACGCTCCCTAGGAATAATGCGCAGCTGACAAATCGACCCCGTTTACCACTCAATTTATTACACCGATTTGAAGATCTATTAATGGAAGGAGATTTACTTGAGGTGACGCTGAAAGAAACTTCACATTTATGGAAAGTCGTTAGAGCTGCTCGTGATACACGCGAAGTATTTGGTGTATGGAACGAACGAAGAGGGCGAGCACCTGGGGCAGCTAACACTTGTGTAACCGGTACTGTCCCTTTGTCGTTGAAAAGAACAGCTCAAAGTACAGGATCATCTTTACACAGGCGGAATCATTTGAAAAGACCCCGTAGAAATAAAGACGGTAGTGAAAGCAAACCAATTCCAATTAAAAAGGCAAGAAAATCTCCTACTCCAACTGCTGCAAACGTTCCACGGCGTAATCTTGCTACACCGGCTCCTAATTATCTGAACAGAAAACAAAACCTTCAGAGTGTTGGTGGCAGTGGCCTGATGATGAAGAAACAATATTTAGCAAAACAAGAAAGAAGACGACACAAACTTGTAACAACAAAATCTTCTCCGGAAAAACCTGCAGGGCGAGGACGTAGAGCTGTACATAAATTGAGGAAAAGTCATGGAGGTGGTGAGGATGGTGATGGTGATAAAAGCGGTGCACCTCCATCTCCTGTATCTGAAGATACAAGTTCTGGTAATATGAGTTCAAACGATGATGATGAAGATTGTGCTGCTCCTACCTGTTTACGCCCAACCGGTAAAGAAGTAGACTGGGTCCAGTGTGATGGAAAATGCGAAAAATGGTTCCATCTTCATTGCGTTGGTCTTTCAAAATCATCCCTGAAAGACGATGAAGATTATTATTGCAATTCTTGCACTTCCAAGAAACGTGGAGATAATTCAATGAAAAGTGATGACAGCCAGAGTATGACAGAATATGAATTCCCAAAAAAGGAATTAAAAATAAAATCCGATGCTAAAGAAGACGACCAAACGTTGGCAGTCGTCAAAGAATCGATTAAAGCGGAATTCCATGATAAATCAAATTCGAAAATAATCAACGGAAGCGCCGAGTCATCCCAGAGTGGCTCACCATCGTCAAGCACAAATTTAGTCAAACTGGAAGATAAAATGCATGTAAGTGATTCTGAGATAACAGTTTTATCATCACAAACGAACAAAAGTGAAAAATAA
Protein Sequence
MGRCEEAAEGAEGAAFLFTVPPEAPVFTPTPEEFRDPLAYISKIRPHAEKSGICKIKPPANWQPPFAVDVDKLKFTPRVQRLNELEAITRVKLNFLDQIVKFWELQGSLVKIPTVERKPLDLYSLHKIVKEAGGFDVCTAERRWSKIAVRMGHPQGKGVGSILKNHYERILYPYDLFKSGEAGETKIEVKNEVTPEKANMSGCKGRGSAQKVPSQSPVHNENKPSTRRWKKQNEQDAENESNQAEGNEGSDKKKDLRRTQAVKSSEIDDKKSVLRDSPSKRRAASLASNPPRMASCPGIASMRPMRSTANRSSSLQAKRQVSMTVNVVPALPDTEKAPVDPLAKYICHNCGRGDIEEQMLLCDGCDDSYHTFCLMPPLGDIPKGDWRCPRCIAQEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHLVPTQTVEKEFWRVVSSIDEDVTVQYGADLHSMDHGSGFPTKSSLHLYPGDQEYADSSWNLNNLPLLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPGSKAELFETTMRSAAPELFQWQPDLLHQLVTIMNPNILMQAGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKIGRECITHYSNLRRFCVFSHDELVCKMALEAETLEATVALATYQDMRNMLNDERKLRKSLLESGVTEAEREAFELLPDDERQCSFCKTTCFLSAVTCPCTENLVCLRHYSSLCTCSSSKHKLRYRYTLDELPMMLEKLKRRSETFREWADAVSNALDPDTPKSCDLEGLRVHLKKAQDLKMQKSDLIRALEVAIEDAEKCASVIHQLDLNKMRTRTRHSADLKYRLTVEELTLFCEEIDGLACVLPEGSAVKEVLRQTIELEKSAEALLAIEAGSLGAPSRIKELELCAEKGSALCIQLPCLPLIMNRLQQEKYLEEVKLHREDYESLNIEKMNKLLEQGIKLQPNYQVEAQLAYLQDLKSEVEKWEVKAKIILGSDSDHHSLEETETLLREADGIEALLPSKQQLTNAVTQAKDWLQKVDEMRSKESYPYFSTLEALVKKGSAIPINLYEKDMLSSALDSAQQWKERTAETFLRKNWMHGLMEALSPRTDILTSTRKVSNSQGGRQTPNNKNSSLSNSIASLVIGTPSTLEAENFMRNFSEERSPTQIVAAFKAAEEIELSNMRELRARNLRKDVRVQQPGTSFCHCQKRQYGLMTQCQLCKEWFHAICIHNKNSETGPPTPPLSDPSSPEQEPLSPGSPTSNGPGSSRYLCNNCLRTRRPRLNTILGLLVSLQKLPVRLCEGEALQCLTERAMAWQDKARNLMNNKEATRALAALNSENLASQNIAKSEKISPEIKKGAKNADSQQYGSGRSNSPSDPVHNRNCSASEHAYSASPQTLPRNNAQLTNRPRLPLNLLHRFEDLLMEGDLLEVTLKETSHLWKVVRAARDTREVFGVWNERRGRAPGAANTCVTGTVPLSLKRTAQSTGSSLHRRNHLKRPRRNKDGSESKPIPIKKARKSPTPTAANVPRRNLATPAPNYLNRKQNLQSVGGSGLMMKKQYLAKQERRRHKLVTTKSSPEKPAGRGRRAVHKLRKSHGGGEDGDGDKSGAPPSPVSEDTSSGNMSSNDDDEDCAAPTCLRPTGKEVDWVQCDGKCEKWFHLHCVGLSKSSLKDDEDYYCNSCTSKKRGDNSMKSDDSQSMTEYEFPKKELKIKSDAKEDDQTLAVVKESIKAEFHDKSNSKIINGSAESSQSGSPSSSTNLVKLEDKMHVSDSEITVLSSQTNKSEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-